RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 CNGB1Q14028 1251 aaPredicted RBP18.05■□□□□ 0.48
COL4A6-207ENST00000487645 RALBP1Q15311 655 aa18.05■□□□□ 0.48
COL4A6-207ENST00000487645 ZNF772Q68DY9 489 aaPredicted RBP18.05■□□□□ 0.48
COL4A6-207ENST00000487645 UNC5CLQ8IV45 518 aa18.05■□□□□ 0.48
COL4A6-207ENST00000487645 USP21Q9UK80 565 aa18.05■□□□□ 0.48
COL4A6-207ENST00000487645 AXIN2Q9Y2T1 843 aa18.05■□□□□ 0.48
COL4A6-207ENST00000487645 RTL1A6NKG5 1358 aa18.04■□□□□ 0.48
COL4A6-207ENST00000487645 BCL9LQ86UU0 1499 aa18.04■□□□□ 0.48
COL4A6-207ENST00000487645 HOXC9P31274 260 aa18.04■□□□□ 0.48
COL4A6-207ENST00000487645 PARD3Q8TEW0 1356 aa18.04■□□□□ 0.48
COL4A6-207ENST00000487645 EVA1CP58658 441 aa18.03■□□□□ 0.48
COL4A6-207ENST00000487645 EMILIN1Q9Y6C2 1016 aa18.03■□□□□ 0.48
COL4A6-207ENST00000487645 BLMP54132 1417 aaPredicted RBP18.03■□□□□ 0.48
COL4A6-207ENST00000487645 NRAPQ86VF7 1730 aa18.03■□□□□ 0.48
COL4A6-207ENST00000487645 FLT4P35916 1363 aa18.03■□□□□ 0.48
COL4A6-207ENST00000487645 PHF23Q9BUL5 403 aaPredicted RBP18.02■□□□□ 0.48
COL4A6-207ENST00000487645 PEAK1Q9H792 1746 aa18.02■□□□□ 0.48
COL4A6-207ENST00000487645 SMG6Q86US8 1419 aaKnown RBP18.01■□□□□ 0.47
COL4A6-207ENST00000487645 PPM1GO15355 546 aaPredicted RBP18.01■□□□□ 0.47
COL4A6-207ENST00000487645 MTHFSP49914 203 aa18.01■□□□□ 0.47
COL4A6-207ENST00000487645 INSRP06213 1382 aa18.01■□□□□ 0.47
COL4A6-207ENST00000487645 PPP2R1AP30153 589 aa18■□□□□ 0.47
COL4A6-207ENST00000487645 PRKRIP1Q9H875 184 aaPredicted RBP18■□□□□ 0.47
COL4A6-207ENST00000487645 QTRT2Q9H974 415 aaKnown RBP18■□□□□ 0.47
COL4A6-207ENST00000487645 RGS17Q9UGC6 210 aaPredicted RBP18■□□□□ 0.47
COL4A6-207ENST00000487645 TRPC5Q9UL62 973 aaPredicted RBP18■□□□□ 0.47
COL4A6-207ENST00000487645 COL5A2P05997 1499 aaPredicted RBP18■□□□□ 0.47
COL4A6-207ENST00000487645 VPS72Q15906 364 aa17.99■□□□□ 0.47
COL4A6-207ENST00000487645 HSP90AB2PQ58FF8 381 aa17.99■□□□□ 0.47
COL4A6-207ENST00000487645 STRN4Q9NRL3 753 aa17.99■□□□□ 0.47
COL4A6-207ENST00000487645 ANKRD24Q8TF21 1146 aa17.98■□□□□ 0.47
COL4A6-207ENST00000487645 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
COL4A6-207ENST00000487645 CDK12Q9NYV4 1490 aaPredicted RBP17.97■□□□□ 0.47
COL4A6-207ENST00000487645 ATRNO75882 1429 aa17.97■□□□□ 0.47
COL4A6-207ENST00000487645 ERBB3P21860 1342 aa17.97■□□□□ 0.47
COL4A6-207ENST00000487645 FAM208AQ9UK61 1670 aaKnown RBP17.96■□□□□ 0.47
COL4A6-207ENST00000487645 ANP32CO43423 234 aa17.96■□□□□ 0.47
COL4A6-207ENST00000487645 LARP1Q6PKG0 1096 aaKnown RBP17.96■□□□□ 0.47
COL4A6-207ENST00000487645 CSB-PGBD3P0DP91 1061 aa17.95■□□□□ 0.46
COL4A6-207ENST00000487645 GJD4Q96KN9 370 aaPredicted RBP17.95■□□□□ 0.46
COL4A6-207ENST00000487645 SPATA31A5Q5VU36 1347 aa17.95■□□□□ 0.46
COL4A6-207ENST00000487645 SPATA31A7Q8IWB4 1347 aa17.95■□□□□ 0.46
COL4A6-207ENST00000487645 MYBBP1AQ9BQG0 1328 aaKnown RBP17.95■□□□□ 0.46
COL4A6-207ENST00000487645 RGPD2P0DJD1 1756 aa17.94■□□□□ 0.46
COL4A6-207ENST00000487645 TOM1L2Q6ZVM7 507 aa17.94■□□□□ 0.46
COL4A6-207ENST00000487645 LTV1Q96GA3 475 aaPredicted RBP17.94■□□□□ 0.46
COL4A6-207ENST00000487645 CFAP53Q96M91 514 aa17.94■□□□□ 0.46
COL4A6-207ENST00000487645 CARD10Q9BWT7 1032 aa17.94■□□□□ 0.46
COL4A6-207ENST00000487645 CRB1P82279 1406 aa17.94■□□□□ 0.46
COL4A6-207ENST00000487645 POTEAQ6S8J7 498 aa17.93■□□□□ 0.46
COL4A6-207ENST00000487645 THRAP3Q9Y2W1 955 aaKnown RBP17.93■□□□□ 0.46
COL4A6-207ENST00000487645 CCDC9Q9Y3X0 531 aaKnown RBP17.93■□□□□ 0.46
COL4A6-207ENST00000487645 SPATA31A1Q5TZJ5 1347 aa17.93■□□□□ 0.46
COL4A6-207ENST00000487645 RBM6P78332 1123 aaKnown RBP17.92■□□□□ 0.46
COL4A6-207ENST00000487645 EIF4A2Q14240 407 aaKnown RBP17.92■□□□□ 0.46
COL4A6-207ENST00000487645 RXRBP28702 533 aa17.91■□□□□ 0.46
COL4A6-207ENST00000487645 NLRP2Q9NX02 1062 aa17.91■□□□□ 0.46
COL4A6-207ENST00000487645 ONECUT3O60422 494 aaPredicted RBP17.9■□□□□ 0.46
COL4A6-207ENST00000487645 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
COL4A6-207ENST00000487645 IL13P35225 146 aa17.9■□□□□ 0.46
COL4A6-207ENST00000487645 DIEXFQ68CQ4 756 aaKnown RBP17.9■□□□□ 0.46
COL4A6-207ENST00000487645 TCP11L2Q8N4U5 519 aa17.9■□□□□ 0.46
COL4A6-207ENST00000487645 NBPF6Q5VWK0 638 aa17.89■□□□□ 0.45
COL4A6-207ENST00000487645 BARGINQ6ZT62 677 aa17.89■□□□□ 0.45
COL4A6-207ENST00000487645 NBPF4Q96M43 638 aa17.89■□□□□ 0.45
COL4A6-207ENST00000487645 GLI3P10071 1580 aa17.88■□□□□ 0.45
COL4A6-207ENST00000487645 EYA1Q99502 592 aa17.88■□□□□ 0.45
COL4A6-207ENST00000487645 USP35Q9P2H5 1018 aa17.88■□□□□ 0.45
COL4A6-207ENST00000487645 COL3A1P02461 1466 aaPredicted RBP17.88■□□□□ 0.45
COL4A6-207ENST00000487645 CDCA7Q9BWT1 371 aaPredicted RBP17.86■□□□□ 0.45
COL4A6-207ENST00000487645 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
COL4A6-207ENST00000487645 RGPD1P0DJD0 1748 aa17.86■□□□□ 0.45
COL4A6-207ENST00000487645 NCAPD2Q15021 1401 aa17.85■□□□□ 0.45
COL4A6-207ENST00000487645 IGSF1Q8N6C5 1336 aa17.85■□□□□ 0.45
COL4A6-207ENST00000487645 WNK3Q9BYP7 1800 aa17.85■□□□□ 0.45
COL4A6-207ENST00000487645 FAM98CQ17RN3 349 aaKnown RBP17.84■□□□□ 0.45
COL4A6-207ENST00000487645 IL2RBP14784 551 aa17.83■□□□□ 0.44
COL4A6-207ENST00000487645 USHBP1Q8N6Y0 703 aa17.82■□□□□ 0.44
COL4A6-207ENST00000487645 PARP4Q9UKK3 1724 aaKnown RBP17.81■□□□□ 0.44
COL4A6-207ENST00000487645 RAPGEF4Q8WZA2 1011 aa17.81■□□□□ 0.44
COL4A6-207ENST00000487645 DISP2A7MBM2 1401 aa17.81■□□□□ 0.44
COL4A6-207ENST00000487645 THSD7AQ9UPZ6 1657 aa17.8■□□□□ 0.44
COL4A6-207ENST00000487645 BRWD3Q6RI45 1802 aa17.8■□□□□ 0.44
COL4A6-207ENST00000487645 U2SURPO15042 1029 aaKnown RBP17.8■□□□□ 0.44
COL4A6-207ENST00000487645 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
COL4A6-207ENST00000487645 SEPT12Q8IYM1 358 aa17.8■□□□□ 0.44
COL4A6-207ENST00000487645 KDRP35968 1356 aa17.79■□□□□ 0.44
COL4A6-207ENST00000487645 TATP17735 454 aaPredicted RBP17.79■□□□□ 0.44
COL4A6-207ENST00000487645 PLEKHG2Q9H7P9 1386 aa17.79■□□□□ 0.44
COL4A6-207ENST00000487645 EXOC5O00471 708 aa17.78■□□□□ 0.44
COL4A6-207ENST00000487645 U2AF1L5P0DN76 240 aaPredicted RBP17.78■□□□□ 0.44
COL4A6-207ENST00000487645 U2AF1Q01081 240 aaKnown RBP eCLIP17.78■□□□□ 0.44
COL4A6-207ENST00000487645 A0A0G2JS52 829 aa17.77■□□□□ 0.44
COL4A6-207ENST00000487645 FCHSD2O94868 740 aa17.77■□□□□ 0.44
COL4A6-207ENST00000487645 MYT1Q01538 1121 aa17.77■□□□□ 0.44
COL4A6-207ENST00000487645 DDB1Q16531 1140 aa17.77■□□□□ 0.44
COL4A6-207ENST00000487645 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.77■□□□□ 0.44
COL4A6-207ENST00000487645 HMOX1P09601 288 aa17.76■□□□□ 0.43
COL4A6-207ENST00000487645 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
COL4A6-207ENST00000487645 AEBP1Q8IUX7 1158 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms