RNA–Protein interactions for RNA: ENST00000487159.5

TRAK1-209, Transcript of trafficking kinesin protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRAK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-209ENST00000487159 MAP3K11Q16584 847 aa20.72■□□□□ 0.91
TRAK1-209ENST00000487159 KIF4BQ2VIQ3 1234 aa20.71■□□□□ 0.91
TRAK1-209ENST00000487159 C16orf45Q96MC5 204 aaPredicted RBP20.71■□□□□ 0.91
TRAK1-209ENST00000487159 KIF5CO60282 957 aa20.71■□□□□ 0.91
TRAK1-209ENST00000487159 KDM4AO75164 1064 aa20.71■□□□□ 0.91
TRAK1-209ENST00000487159 SPATA32Q96LK8 384 aa20.71■□□□□ 0.91
TRAK1-209ENST00000487159 SOGA1O94964 1423 aa20.71■□□□□ 0.91
TRAK1-209ENST00000487159 POTEB2H3BUK9 544 aa20.71■□□□□ 0.91
TRAK1-209ENST00000487159 CDK5RAP3Q96JB5 506 aa20.71■□□□□ 0.91
TRAK1-209ENST00000487159 CFAP100Q494V2 611 aa20.7■□□□□ 0.9
TRAK1-209ENST00000487159 EIF2S2P20042 333 aaKnown RBP20.7■□□□□ 0.9
TRAK1-209ENST00000487159 LTV1Q96GA3 475 aaPredicted RBP20.7■□□□□ 0.9
TRAK1-209ENST00000487159 WASHC4Q2M389 1173 aa20.7■□□□□ 0.9
TRAK1-209ENST00000487159 RIPK4P57078 832 aa20.7■□□□□ 0.9
TRAK1-209ENST00000487159 IFFO1Q0D2I5 559 aa20.69■□□□□ 0.9
TRAK1-209ENST00000487159 NUTM2DQ5VT03 806 aaPredicted RBP20.69■□□□□ 0.9
TRAK1-209ENST00000487159 SPECC1LQ69YQ0 1117 aa20.69■□□□□ 0.9
TRAK1-209ENST00000487159 TANGO6Q9C0B7 1094 aa20.69■□□□□ 0.9
TRAK1-209ENST00000487159 CLCN1P35523 988 aa20.69■□□□□ 0.9
TRAK1-209ENST00000487159 GIGYF2Q6Y7W6 1299 aaKnown RBP20.69■□□□□ 0.9
TRAK1-209ENST00000487159 LARP1BQ659C4 914 aaKnown RBP20.68■□□□□ 0.9
TRAK1-209ENST00000487159 FSD1Q9BTV5 496 aa20.68■□□□□ 0.9
TRAK1-209ENST00000487159 HSPA4P34932 840 aa20.68■□□□□ 0.9
TRAK1-209ENST00000487159 IMMTQ16891 758 aaKnown RBP20.68■□□□□ 0.9
TRAK1-209ENST00000487159 PPM1EQ8WY54 764 aa20.68■□□□□ 0.9
TRAK1-209ENST00000487159 STAMBPO95630 424 aa20.68■□□□□ 0.9
TRAK1-209ENST00000487159 DHX57Q6P158 1386 aaKnown RBP20.67■□□□□ 0.9
TRAK1-209ENST00000487159 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
TRAK1-209ENST00000487159 BCCIPQ9P287 314 aaKnown RBP eCLIP20.67■□□□□ 0.9
TRAK1-209ENST00000487159 RSPH14Q9UHP6 348 aa20.67■□□□□ 0.9
TRAK1-209ENST00000487159 CYP46A1Q9Y6A2 500 aa20.67■□□□□ 0.9
TRAK1-209ENST00000487159 TTC31Q49AM3 519 aaPredicted RBP20.66■□□□□ 0.9
TRAK1-209ENST00000487159 CPSF2Q9P2I0 782 aaKnown RBP20.66■□□□□ 0.9
TRAK1-209ENST00000487159 SART3Q15020 963 aaKnown RBP20.66■□□□□ 0.9
TRAK1-209ENST00000487159 TEFQ10587 303 aa20.66■□□□□ 0.9
TRAK1-209ENST00000487159 GCOM1H8Y6P7 765 aaPredicted RBP20.65■□□□□ 0.9
TRAK1-209ENST00000487159 MYZAPP0CAP1 466 aa20.65■□□□□ 0.9
TRAK1-209ENST00000487159 SEPT6Q14141 434 aa20.65■□□□□ 0.9
TRAK1-209ENST00000487159 ANKRD1Q15327 319 aa20.65■□□□□ 0.9
TRAK1-209ENST00000487159 NUTM2FA1L443 756 aa20.65■□□□□ 0.9
TRAK1-209ENST00000487159 DDX58O95786 925 aaKnown RBP20.65■□□□□ 0.9
TRAK1-209ENST00000487159 KRT18P05783 430 aaKnown RBP20.64■□□□□ 0.9
TRAK1-209ENST00000487159 DAAM2Q86T65 1068 aa20.64■□□□□ 0.9
TRAK1-209ENST00000487159 NECTIN2Q92692 538 aa20.64■□□□□ 0.9
TRAK1-209ENST00000487159 OSCARQ8IYS5 282 aa20.64■□□□□ 0.9
TRAK1-209ENST00000487159 CLIP2Q9UDT6 1046 aa20.64■□□□□ 0.9
TRAK1-209ENST00000487159 WASHC2CQ9Y4E1 1318 aa20.64■□□□□ 0.89
TRAK1-209ENST00000487159 NEMFO60524 1076 aa20.64■□□□□ 0.89
TRAK1-209ENST00000487159 KRI1Q8N9T8 703 aaKnown RBP20.64■□□□□ 0.89
TRAK1-209ENST00000487159 GCC1Q96CN9 775 aa20.64■□□□□ 0.89
TRAK1-209ENST00000487159 SARNPP82979 210 aaKnown RBP20.64■□□□□ 0.89
TRAK1-209ENST00000487159 MICALL1Q8N3F8 863 aa20.63■□□□□ 0.89
TRAK1-209ENST00000487159 HIP1O00291 1037 aa20.63■□□□□ 0.89
TRAK1-209ENST00000487159 EIF5P55010 431 aaKnown RBP20.63■□□□□ 0.89
TRAK1-209ENST00000487159 SPECC1Q5M775 1068 aa20.63■□□□□ 0.89
TRAK1-209ENST00000487159 TRMT1Q9NXH9 659 aaKnown RBP20.63■□□□□ 0.89
TRAK1-209ENST00000487159 UBE4AQ14139 1066 aa20.63■□□□□ 0.89
TRAK1-209ENST00000487159 RAI14Q9P0K7 980 aa20.63■□□□□ 0.89
TRAK1-209ENST00000487159 WDR66Q8TBY9 1149 aa20.62■□□□□ 0.89
TRAK1-209ENST00000487159 GNAI1P63096 354 aa20.62■□□□□ 0.89
TRAK1-209ENST00000487159 NEUROD6Q96NK8 337 aa20.62■□□□□ 0.89
TRAK1-209ENST00000487159 PAF1Q8N7H5 531 aa20.62■□□□□ 0.89
TRAK1-209ENST00000487159 USP25Q9UHP3 1055 aa20.62■□□□□ 0.89
TRAK1-209ENST00000487159 PAXBP1Q9Y5B6 917 aa20.62■□□□□ 0.89
TRAK1-209ENST00000487159 C6orf163Q5TEZ5 329 aa20.62■□□□□ 0.89
TRAK1-209ENST00000487159 CCDC183Q5T5S1 534 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 VPS37DQ86XT2 251 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 FBF1Q8TES7 1133 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 CFAP57Q96MR6 1250 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 USP47Q96K76 1375 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 NGDNQ8NEJ9 315 aaKnown RBP20.61■□□□□ 0.89
TRAK1-209ENST00000487159 PAIP2Q9BPZ3 127 aaKnown RBP20.61■□□□□ 0.89
TRAK1-209ENST00000487159 STK3Q13188 491 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 C1orf141Q5JVX7 400 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 CEP57Q86XR8 500 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 CCDC94Q9BW85 323 aaPredicted RBP20.61■□□□□ 0.89
TRAK1-209ENST00000487159 RASSF4Q9H2L5 321 aa20.61■□□□□ 0.89
TRAK1-209ENST00000487159 TMCO5BA8MYB1 307 aa20.6■□□□□ 0.89
TRAK1-209ENST00000487159 SPA17Q15506 151 aa20.6■□□□□ 0.89
TRAK1-209ENST00000487159 UBTFL1P0CB47 393 aaPredicted RBP20.6■□□□□ 0.89
TRAK1-209ENST00000487159 PAFAH1B1P43034 410 aa20.6■□□□□ 0.89
TRAK1-209ENST00000487159 DIAPH1O60610 1272 aaKnown RBP20.6■□□□□ 0.89
TRAK1-209ENST00000487159 ANKRD30AQ9BXX3 1397 aa20.6■□□□□ 0.89
TRAK1-209ENST00000487159 CAMK4Q16566 473 aa20.59■□□□□ 0.89
TRAK1-209ENST00000487159 PDE3AQ14432 1141 aa20.59■□□□□ 0.89
TRAK1-209ENST00000487159 CCDC83Q8IWF9 413 aa20.59■□□□□ 0.89
TRAK1-209ENST00000487159 SEPT11Q9NVA2 429 aaKnown RBP20.59■□□□□ 0.89
TRAK1-209ENST00000487159 ATP2C2O75185 946 aa20.59■□□□□ 0.89
TRAK1-209ENST00000487159 GBP6Q6ZN66 633 aa20.59■□□□□ 0.89
TRAK1-209ENST00000487159 PAXIP1Q6ZW49 1069 aaPredicted RBP20.58■□□□□ 0.89
TRAK1-209ENST00000487159 ZNF397Q8NF99 534 aaPredicted RBP20.58■□□□□ 0.89
TRAK1-209ENST00000487159 CEP83Q9Y592 693 aa20.58■□□□□ 0.89
TRAK1-209ENST00000487159 CCDC6Q16204 474 aa20.58■□□□□ 0.89
TRAK1-209ENST00000487159 SMAP1Q8IYB5 467 aaPredicted RBP20.58■□□□□ 0.89
TRAK1-209ENST00000487159 PPP6R1Q9UPN7 881 aa20.58■□□□□ 0.89
TRAK1-209ENST00000487159 TOP1P11387 765 aaKnown RBP20.58■□□□□ 0.88
TRAK1-209ENST00000487159 HNRNPMP52272 730 aaKnown RBP eCLIP20.57■□□□□ 0.881e-8■■■■□ 19.8
TRAK1-209ENST00000487159 GOPCQ9HD26 462 aa20.57■□□□□ 0.88
TRAK1-209ENST00000487159 CCDC160A6NGH7 325 aa20.57■□□□□ 0.88
TRAK1-209ENST00000487159 CEP135Q66GS9 1140 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms