RNA–Protein interactions for RNA: ENST00000486762.6

CUEDC2-204, Transcript of CUE domain containing 2, humanhuman

TSL 3

Gene CUEDC2, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC2-204ENST00000486762 DDB1Q16531 1140 aa16.3■□□□□ 0.2
CUEDC2-204ENST00000486762 ACEP12821 1306 aa16.29■□□□□ 0.2
CUEDC2-204ENST00000486762 TXNRD1Q16881 649 aa16.29■□□□□ 0.2
CUEDC2-204ENST00000486762 PARP4Q9UKK3 1724 aaKnown RBP16.28■□□□□ 0.2
CUEDC2-204ENST00000486762 MAP3K5Q99683 1374 aa16.28■□□□□ 0.2
CUEDC2-204ENST00000486762 NEUROD1Q13562 356 aa16.28■□□□□ 0.2
CUEDC2-204ENST00000486762 CEP350Q5VT06 3117 aa16.28■□□□□ 0.2
CUEDC2-204ENST00000486762 ITSN1Q15811 1721 aa16.27■□□□□ 0.19
CUEDC2-204ENST00000486762 PEAK1Q9H792 1746 aa16.27■□□□□ 0.19
CUEDC2-204ENST00000486762 CRB1P82279 1406 aa16.27■□□□□ 0.19
CUEDC2-204ENST00000486762 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
CUEDC2-204ENST00000486762 ABTB2Q8N961 1025 aa16.26■□□□□ 0.19
CUEDC2-204ENST00000486762 LMO7Q8WWI1 1683 aa16.24■□□□□ 0.19
CUEDC2-204ENST00000486762 COL5A2P05997 1499 aaPredicted RBP16.24■□□□□ 0.19
CUEDC2-204ENST00000486762 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
CUEDC2-204ENST00000486762 CABP2Q9NPB3 220 aa16.24■□□□□ 0.19
CUEDC2-204ENST00000486762 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
CUEDC2-204ENST00000486762 USP19O94966 1318 aa16.23■□□□□ 0.19
CUEDC2-204ENST00000486762 GCP02774 474 aa16.23■□□□□ 0.19
CUEDC2-204ENST00000486762 MARCH10Q8NA82 808 aaPredicted RBP16.23■□□□□ 0.19
CUEDC2-204ENST00000486762 BRD4O60885 1362 aaPredicted RBP16.23■□□□□ 0.19
CUEDC2-204ENST00000486762 BCL9O00512 1426 aa16.22■□□□□ 0.19
CUEDC2-204ENST00000486762 PPIP5K1Q6PFW1 1433 aa16.22■□□□□ 0.19
CUEDC2-204ENST00000486762 ZBTB7CA1YPR0 619 aa16.22■□□□□ 0.19
CUEDC2-204ENST00000486762 NLRP13Q86W25 1043 aa16.22■□□□□ 0.19
CUEDC2-204ENST00000486762 ROCK2O75116 1388 aaKnown RBP16.22■□□□□ 0.19
CUEDC2-204ENST00000486762 SBF2Q86WG5 1849 aa16.22■□□□□ 0.19
CUEDC2-204ENST00000486762 EVC2Q86UK5 1308 aa16.21■□□□□ 0.19
CUEDC2-204ENST00000486762 TOM1L2Q6ZVM7 507 aa16.21■□□□□ 0.19
CUEDC2-204ENST00000486762 KLHL34Q8N239 644 aa16.21■□□□□ 0.19
CUEDC2-204ENST00000486762 LRRC37A3O60309 1634 aa16.2■□□□□ 0.18
CUEDC2-204ENST00000486762 CDCA7Q9BWT1 371 aaPredicted RBP16.2■□□□□ 0.18
CUEDC2-204ENST00000486762 CABP1Q9NZU7 370 aa16.2■□□□□ 0.18
CUEDC2-204ENST00000486762 AATKQ6ZMQ8 1374 aa16.2■□□□□ 0.18
CUEDC2-204ENST00000486762 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
CUEDC2-204ENST00000486762 SHANK3Q9BYB0 1731 aa16.17■□□□□ 0.18
CUEDC2-204ENST00000486762 HSPA6P17066 643 aa16.17■□□□□ 0.18
CUEDC2-204ENST00000486762 POLD1P28340 1107 aa16.17■□□□□ 0.18
CUEDC2-204ENST00000486762 CCER1Q8TC90 406 aaPredicted RBP16.17■□□□□ 0.18
CUEDC2-204ENST00000486762 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
CUEDC2-204ENST00000486762 GRIN3BO60391 1043 aa16.16■□□□□ 0.18
CUEDC2-204ENST00000486762 ZNF692Q9BU19 519 aaPredicted RBP16.16■□□□□ 0.18
CUEDC2-204ENST00000486762 EXOC5O00471 708 aa16.15■□□□□ 0.18
CUEDC2-204ENST00000486762 USP6P35125 1406 aa16.15■□□□□ 0.18
CUEDC2-204ENST00000486762 SLC16A10Q8TF71 515 aa16.14■□□□□ 0.17
CUEDC2-204ENST00000486762 WDR17Q8IZU2 1322 aa16.14■□□□□ 0.17
CUEDC2-204ENST00000486762 ATP10DQ9P241 1426 aa16.13■□□□□ 0.17
CUEDC2-204ENST00000486762 CARD11Q9BXL7 1154 aa16.13■□□□□ 0.17
CUEDC2-204ENST00000486762 GPBP1L1Q9HC44 474 aaPredicted RBP16.13■□□□□ 0.17
CUEDC2-204ENST00000486762 CLSPNQ9HAW4 1339 aa16.13■□□□□ 0.17
CUEDC2-204ENST00000486762 TONSLQ96HA7 1378 aa16.13■□□□□ 0.17
CUEDC2-204ENST00000486762 SBNO2Q9Y2G9 1366 aa16.13■□□□□ 0.17
CUEDC2-204ENST00000486762 NLRP6P59044 892 aa16.12■□□□□ 0.17
CUEDC2-204ENST00000486762 ZNF827Q17R98 1081 aa16.12■□□□□ 0.17
CUEDC2-204ENST00000486762 NLGN2Q8NFZ4 835 aa16.11■□□□□ 0.17
CUEDC2-204ENST00000486762 CSB-PGBD3P0DP91 1061 aa16.1■□□□□ 0.17
CUEDC2-204ENST00000486762 CARD10Q9BWT7 1032 aa16.1■□□□□ 0.17
CUEDC2-204ENST00000486762 AXIN2Q9Y2T1 843 aa16.1■□□□□ 0.17
CUEDC2-204ENST00000486762 YBX3P16989 372 aaKnown RBP eCLIP16.09■□□□□ 0.17
CUEDC2-204ENST00000486762 ACSBG1Q96GR2 724 aa16.09■□□□□ 0.17
CUEDC2-204ENST00000486762 TTC21BQ7Z4L5 1316 aa16.09■□□□□ 0.17
CUEDC2-204ENST00000486762 CPSF1Q10570 1443 aaKnown RBP16.09■□□□□ 0.17
CUEDC2-204ENST00000486762 AKAP12Q02952 1782 aa16.08■□□□□ 0.17
CUEDC2-204ENST00000486762 ZEB1P37275 1124 aaPredicted RBP16.08■□□□□ 0.16
CUEDC2-204ENST00000486762 TTC21AQ8NDW8 1320 aa16.08■□□□□ 0.16
CUEDC2-204ENST00000486762 PUS7Q96PZ0 661 aaKnown RBP16.07■□□□□ 0.16
CUEDC2-204ENST00000486762 SLIT3O75094 1523 aa16.07■□□□□ 0.16
CUEDC2-204ENST00000486762 PAPPAQ13219 1627 aa16.07■□□□□ 0.16
CUEDC2-204ENST00000486762 KCNH5Q8NCM2 988 aa16.06■□□□□ 0.16
CUEDC2-204ENST00000486762 AKT1S1Q96B36 256 aa16.06■□□□□ 0.16
CUEDC2-204ENST00000486762 LRRC4BQ9NT99 713 aa16.06■□□□□ 0.16
CUEDC2-204ENST00000486762 KTN1Q86UP2 1357 aaKnown RBP16.05■□□□□ 0.16
CUEDC2-204ENST00000486762 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
CUEDC2-204ENST00000486762 WNK3Q9BYP7 1800 aa16.05■□□□□ 0.16
CUEDC2-204ENST00000486762 GOLGB1Q14789 3259 aaKnown RBP16.05■□□□□ 0.16
CUEDC2-204ENST00000486762 TNS2Q63HR2 1409 aa16.04■□□□□ 0.16
CUEDC2-204ENST00000486762 CCDC7Q96M83 1385 aa16.04■□□□□ 0.16
CUEDC2-204ENST00000486762 PNPLA7Q6ZV29 1317 aa16.04■□□□□ 0.16
CUEDC2-204ENST00000486762 ARHGEF25Q86VW2 580 aa16.04■□□□□ 0.16
CUEDC2-204ENST00000486762 NHSQ6T4R5 1651 aa16.03■□□□□ 0.16
CUEDC2-204ENST00000486762 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
CUEDC2-204ENST00000486762 TFCP2L1Q9NZI6 479 aa16.03■□□□□ 0.16
CUEDC2-204ENST00000486762 PIK3C2AO00443 1686 aa16.02■□□□□ 0.16
CUEDC2-204ENST00000486762 SLC27A3Q5K4L6 730 aa16.02■□□□□ 0.16
CUEDC2-204ENST00000486762 COL18A1P39060 1754 aa16.01■□□□□ 0.15
CUEDC2-204ENST00000486762 ADCY9O60503 1353 aa16■□□□□ 0.15
CUEDC2-204ENST00000486762 USP31Q70CQ4 1352 aa16■□□□□ 0.15
CUEDC2-204ENST00000486762 APLP1P51693 650 aa16■□□□□ 0.15
CUEDC2-204ENST00000486762 HDGFL2Q7Z4V5 671 aaPredicted RBP16■□□□□ 0.15
CUEDC2-204ENST00000486762 TMC1Q8TDI8 760 aa16■□□□□ 0.15
CUEDC2-204ENST00000486762 TESK2Q96S53 571 aa16■□□□□ 0.15
CUEDC2-204ENST00000486762 SLC12A5Q9H2X9 1139 aa16■□□□□ 0.15
CUEDC2-204ENST00000486762 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
CUEDC2-204ENST00000486762 SOX12O15370 315 aa15.99■□□□□ 0.15
CUEDC2-204ENST00000486762 TERF2IPQ9NYB0 399 aa15.99■□□□□ 0.15
CUEDC2-204ENST00000486762 ST20-MTHFSA0A0A6YYL1 179 aa15.98■□□□□ 0.15
CUEDC2-204ENST00000486762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.98■□□□□ 0.15
CUEDC2-204ENST00000486762 ABCC6O95255 1503 aa15.97■□□□□ 0.15
CUEDC2-204ENST00000486762 COL24A1Q17RW2 1714 aa15.97■□□□□ 0.15
CUEDC2-204ENST00000486762 MSH5O43196 834 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms