RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 MEIOBQ8N635 442 aa10.08□□□□□ -0.8
SMC4-218ENST00000486711 SLC10A4Q96EP9 437 aa10.08□□□□□ -0.8
SMC4-218ENST00000486711 GOPCQ9HD26 462 aa10.08□□□□□ -0.8
SMC4-218ENST00000486711 USP17L8P0C7I0 530 aa10.07□□□□□ -0.8
SMC4-218ENST00000486711 PTK2Q05397 1052 aa10.07□□□□□ -0.8
SMC4-218ENST00000486711 LCE2CQ5TA81 110 aa10.07□□□□□ -0.8
SMC4-218ENST00000486711 PCMTD1Q96MG8 357 aaPredicted RBP10.07□□□□□ -0.8
SMC4-218ENST00000486711 GPSM3Q9Y4H4 160 aa10.07□□□□□ -0.8
SMC4-218ENST00000486711 RFC5P40937 340 aa10.06□□□□□ -0.8
SMC4-218ENST00000486711 NEUROD2Q15784 382 aa10.06□□□□□ -0.8
SMC4-218ENST00000486711 C6orf118Q5T5N4 469 aa10.06□□□□□ -0.8
SMC4-218ENST00000486711 LINC00528Q8N1L1 170 aa10.06□□□□□ -0.8
SMC4-218ENST00000486711 BMP2P12643 396 aa10.05□□□□□ -0.8
SMC4-218ENST00000486711 IRF7Q92985 503 aa10.05□□□□□ -0.8
SMC4-218ENST00000486711 H3BM21 787 aa10.04□□□□□ -0.8
SMC4-218ENST00000486711 KCTD15Q96SI1 283 aaPredicted RBP10.04□□□□□ -0.8
SMC4-218ENST00000486711 PGPEP1Q9NXJ5 209 aa10.04□□□□□ -0.8
SMC4-218ENST00000486711 MAN1A2O60476 641 aa10.03□□□□□ -0.8
SMC4-218ENST00000486711 TSEN34Q9BSV6 310 aaKnown RBP10.03□□□□□ -0.8
SMC4-218ENST00000486711 HMX1Q9NP08 348 aaPredicted RBP10.03□□□□□ -0.8
SMC4-218ENST00000486711 SOBPA7XYQ1 873 aa10.02□□□□□ -0.81
SMC4-218ENST00000486711 VEGFBP49765 207 aa10.02□□□□□ -0.81
SMC4-218ENST00000486711 DHX9Q08211 1270 aaKnown RBP10.02□□□□□ -0.81
SMC4-218ENST00000486711 PPP1R26Q5T8A7 1209 aaPredicted RBP10.02□□□□□ -0.81
SMC4-218ENST00000486711 TMEM259Q4ZIN3 620 aa10.01□□□□□ -0.81
SMC4-218ENST00000486711 ADAM32Q8TC27 787 aa10.01□□□□□ -0.81
SMC4-218ENST00000486711 EPS8L1Q8TE68 723 aa10.01□□□□□ -0.81
SMC4-218ENST00000486711 OCSTAMPQ9BR26 566 aa10.01□□□□□ -0.81
SMC4-218ENST00000486711 STK17AQ9UEE5 414 aa10.01□□□□□ -0.81
SMC4-218ENST00000486711 NBPF20Q3BBV1 942 aa9.99□□□□□ -0.81
SMC4-218ENST00000486711 SOS2Q07890 1332 aaPredicted RBP9.99□□□□□ -0.81
SMC4-218ENST00000486711 GMPRP36959 345 aa9.98□□□□□ -0.81
SMC4-218ENST00000486711 INTS6LQ5JSJ4 861 aaKnown RBP9.98□□□□□ -0.81
SMC4-218ENST00000486711 Q6ZVU0 165 aa9.98□□□□□ -0.81
SMC4-218ENST00000486711 IL27Q8NEV9 243 aa9.98□□□□□ -0.81
SMC4-218ENST00000486711 CBLBQ13191 982 aa9.96□□□□□ -0.82
SMC4-218ENST00000486711 DZIP3Q86Y13 1208 aaKnown RBP9.96□□□□□ -0.82
SMC4-218ENST00000486711 ERBB4Q15303 1308 aa9.96□□□□□ -0.82
SMC4-218ENST00000486711 BRPF1P55201 1214 aaPredicted RBP9.95□□□□□ -0.82
SMC4-218ENST00000486711 TRIM34Q9BYJ4 488 aa9.95□□□□□ -0.82
SMC4-218ENST00000486711 DNMT3LQ9UJW3 386 aa9.95□□□□□ -0.82
SMC4-218ENST00000486711 TTLL8A6PVC2 850 aa9.94□□□□□ -0.82
SMC4-218ENST00000486711 VSIG8P0DPA2 414 aa9.94□□□□□ -0.82
SMC4-218ENST00000486711 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.94□□□□□ -0.82
SMC4-218ENST00000486711 SPINT1O43278 529 aa9.93□□□□□ -0.82
SMC4-218ENST00000486711 FAM181BA6NEQ2 426 aa9.91□□□□□ -0.82
SMC4-218ENST00000486711 PPFIA3O75145 1194 aa9.91□□□□□ -0.82
SMC4-218ENST00000486711 RAB15P59190 212 aa9.91□□□□□ -0.82
SMC4-218ENST00000486711 ZBBXA8MT70 800 aa9.9□□□□□ -0.82
SMC4-218ENST00000486711 TRIM52Q96A61 297 aa9.9□□□□□ -0.82
SMC4-218ENST00000486711 GJD4Q96KN9 370 aaPredicted RBP9.9□□□□□ -0.82
SMC4-218ENST00000486711 ESPNB1AK53 854 aa9.89□□□□□ -0.83
SMC4-218ENST00000486711 SEPT12Q8IYM1 358 aa9.89□□□□□ -0.83
SMC4-218ENST00000486711 ZSCAN1Q8NBB4 408 aa9.89□□□□□ -0.83
SMC4-218ENST00000486711 ZNF784Q8NCA9 323 aaPredicted RBP9.89□□□□□ -0.83
SMC4-218ENST00000486711 AGBL1Q96MI9 1066 aa9.89□□□□□ -0.83
SMC4-218ENST00000486711 TMPRSS4Q9NRS4 437 aa9.89□□□□□ -0.83
SMC4-218ENST00000486711 FIGNL2A6NMB9 653 aa9.88□□□□□ -0.83
SMC4-218ENST00000486711 ERVH48-1M5A8F1 160 aa9.88□□□□□ -0.83
SMC4-218ENST00000486711 RELBQ01201 579 aa9.88□□□□□ -0.83
SMC4-218ENST00000486711 ADH1AP07327 375 aa9.87□□□□□ -0.83
SMC4-218ENST00000486711 BANK1Q8NDB2 785 aa9.87□□□□□ -0.83
SMC4-218ENST00000486711 SOCS7O14512 581 aa9.86□□□□□ -0.83
SMC4-218ENST00000486711 PTSQ03393 145 aa9.86□□□□□ -0.83
SMC4-218ENST00000486711 PCDHB9Q9Y5E1 797 aa9.86□□□□□ -0.83
SMC4-218ENST00000486711 FBXO45P0C2W1 286 aa9.85□□□□□ -0.83
SMC4-218ENST00000486711 LORP23490 312 aaPredicted RBP9.85□□□□□ -0.83
SMC4-218ENST00000486711 INSM2Q96T92 566 aaPredicted RBP9.85□□□□□ -0.83
SMC4-218ENST00000486711 POLMQ9NP87 494 aaPredicted RBP9.85□□□□□ -0.83
SMC4-218ENST00000486711 APBB1O00213 710 aa9.84□□□□□ -0.83
SMC4-218ENST00000486711 LILRA1O75019 489 aa9.84□□□□□ -0.83
SMC4-218ENST00000486711 CTSOP43234 321 aaPredicted RBP9.84□□□□□ -0.83
SMC4-218ENST00000486711 ZNF592Q92610 1267 aa9.84□□□□□ -0.83
SMC4-218ENST00000486711 CCDC125Q86Z20 511 aa9.83□□□□□ -0.84
SMC4-218ENST00000486711 ZNF395Q9H8N7 513 aaPredicted RBP9.83□□□□□ -0.84
SMC4-218ENST00000486711 ADD1P35611 737 aaKnown RBP9.82□□□□□ -0.84
SMC4-218ENST00000486711 PTGIRP43119 386 aa9.82□□□□□ -0.84
SMC4-218ENST00000486711 MCCD1P59942 119 aaPredicted RBP9.82□□□□□ -0.84
SMC4-218ENST00000486711 CCDC155Q8N6L0 562 aa9.82□□□□□ -0.84
SMC4-218ENST00000486711 RNF217Q8TC41 542 aa9.82□□□□□ -0.84
SMC4-218ENST00000486711 ZNF330Q9Y3S2 320 aaPredicted RBP9.82□□□□□ -0.84
SMC4-218ENST00000486711 NDUFB9Q9Y6M9 179 aa9.82□□□□□ -0.84
SMC4-218ENST00000486711 GIGYF1O75420 1035 aaPredicted RBP9.81□□□□□ -0.84
SMC4-218ENST00000486711 NR1H3Q13133 447 aa9.81□□□□□ -0.84
SMC4-218ENST00000486711 CYLDQ9NQC7 956 aa9.81□□□□□ -0.84
SMC4-218ENST00000486711 SLC35F4A4IF30 521 aa9.8□□□□□ -0.84
SMC4-218ENST00000486711 RNF20Q5VTR2 975 aa9.8□□□□□ -0.84
SMC4-218ENST00000486711 MTMR14Q8NCE2 650 aa9.8□□□□□ -0.84
SMC4-218ENST00000486711 NANOS1Q8WY41 292 aaKnown RBP9.79□□□□□ -0.84
SMC4-218ENST00000486711 FOXD4L5Q5VV16 416 aaPredicted RBP9.78□□□□□ -0.84
SMC4-218ENST00000486711 KDF1Q8NAX2 398 aaPredicted RBP9.78□□□□□ -0.84
SMC4-218ENST00000486711 ATP5J2-PTCD1G3V325 749 aa9.76□□□□□ -0.85
SMC4-218ENST00000486711 ITGA6P23229 1130 aa9.76□□□□□ -0.85
SMC4-218ENST00000486711 SNRKQ9NRH2 765 aa9.76□□□□□ -0.85
SMC4-218ENST00000486711 GPR37L1O60883 481 aa9.75□□□□□ -0.85
SMC4-218ENST00000486711 ERVK-9P63128 1117 aa9.75□□□□□ -0.85
SMC4-218ENST00000486711 CC2D2BQ6DHV5 1058 aa9.75□□□□□ -0.85
SMC4-218ENST00000486711 LYSMD3Q7Z3D4 306 aa9.75□□□□□ -0.85
SMC4-218ENST00000486711 GPR161Q8N6U8 529 aaKnown RBP9.75□□□□□ -0.85
SMC4-218ENST00000486711 CDC14CA4D256 554 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms