RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.23□□□□□ -1.09
R3HDM1-217ENST00000486532 CARD14Q9BXL6 1004 aa8.23□□□□□ -1.09
R3HDM1-217ENST00000486532 H3BM21 787 aa8.22□□□□□ -1.09
R3HDM1-217ENST00000486532 NR3C2P08235 984 aa8.22□□□□□ -1.09
R3HDM1-217ENST00000486532 BMP2P12643 396 aa8.22□□□□□ -1.09
R3HDM1-217ENST00000486532 PTK2Q05397 1052 aa8.22□□□□□ -1.09
R3HDM1-217ENST00000486532 ERFEQ4G0M1 354 aa8.22□□□□□ -1.09
R3HDM1-217ENST00000486532 MEIOBQ8N635 442 aa8.22□□□□□ -1.09
R3HDM1-217ENST00000486532 ZFAND3Q9H8U3 227 aa8.22□□□□□ -1.09
R3HDM1-217ENST00000486532 LINC00528Q8N1L1 170 aa8.21□□□□□ -1.1
R3HDM1-217ENST00000486532 C6orf118Q5T5N4 469 aa8.2□□□□□ -1.1
R3HDM1-217ENST00000486532 FAM117AQ9C073 453 aa8.2□□□□□ -1.1
R3HDM1-217ENST00000486532 GPBP1L1Q9HC44 474 aaPredicted RBP8.2□□□□□ -1.1
R3HDM1-217ENST00000486532 AP1G2O75843 785 aa8.19□□□□□ -1.1
R3HDM1-217ENST00000486532 GMPRP36959 345 aa8.19□□□□□ -1.1
R3HDM1-217ENST00000486532 LRRN4Q8WUT4 740 aa8.19□□□□□ -1.1
R3HDM1-217ENST00000486532 GOPCQ9HD26 462 aa8.19□□□□□ -1.1
R3HDM1-217ENST00000486532 LORP23490 312 aaPredicted RBP8.18□□□□□ -1.1
R3HDM1-217ENST00000486532 NBPF20Q3BBV1 942 aa8.18□□□□□ -1.1
R3HDM1-217ENST00000486532 NR6A1Q15406 480 aa8.17□□□□□ -1.1
R3HDM1-217ENST00000486532 PROCA1Q8NCQ7 364 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-217ENST00000486532 PCMTD1Q96MG8 357 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-217ENST00000486532 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
R3HDM1-217ENST00000486532 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.16□□□□□ -1.1
R3HDM1-217ENST00000486532 PPP1R26Q5T8A7 1209 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-217ENST00000486532 SOS2Q07890 1332 aaPredicted RBP8.15□□□□□ -1.1
R3HDM1-217ENST00000486532 VSIG8P0DPA2 414 aa8.15□□□□□ -1.1
R3HDM1-217ENST00000486532 TMEM259Q4ZIN3 620 aa8.15□□□□□ -1.1
R3HDM1-217ENST00000486532 USP17L8P0C7I0 530 aa8.14□□□□□ -1.11
R3HDM1-217ENST00000486532 VEGFBP49765 207 aa8.14□□□□□ -1.11
R3HDM1-217ENST00000486532 Q6ZVU0 165 aa8.14□□□□□ -1.11
R3HDM1-217ENST00000486532 TTLL8A6PVC2 850 aa8.13□□□□□ -1.11
R3HDM1-217ENST00000486532 SUZ12Q15022 739 aaKnown RBP8.13□□□□□ -1.11
R3HDM1-217ENST00000486532 ZNF592Q92610 1267 aa8.13□□□□□ -1.11
R3HDM1-217ENST00000486532 RFC5P40937 340 aa8.12□□□□□ -1.11
R3HDM1-217ENST00000486532 DZIP3Q86Y13 1208 aaKnown RBP8.12□□□□□ -1.11
R3HDM1-217ENST00000486532 CCDC125Q86Z20 511 aa8.12□□□□□ -1.11
R3HDM1-217ENST00000486532 ADAM32Q8TC27 787 aa8.12□□□□□ -1.11
R3HDM1-217ENST00000486532 SOBPA7XYQ1 873 aa8.11□□□□□ -1.11
R3HDM1-217ENST00000486532 SPINT1O43278 529 aa8.11□□□□□ -1.11
R3HDM1-217ENST00000486532 ERBB4Q15303 1308 aa8.1□□□□□ -1.11
R3HDM1-217ENST00000486532 PPFIA3O75145 1194 aa8.1□□□□□ -1.11
R3HDM1-217ENST00000486532 INTS6LQ5JSJ4 861 aaKnown RBP8.1□□□□□ -1.11
R3HDM1-217ENST00000486532 SEPT12Q8IYM1 358 aa8.1□□□□□ -1.11
R3HDM1-217ENST00000486532 DNMT3LQ9UJW3 386 aa8.1□□□□□ -1.11
R3HDM1-217ENST00000486532 NEUROD2Q15784 382 aa8.09□□□□□ -1.11
R3HDM1-217ENST00000486532 APBB1O00213 710 aa8.08□□□□□ -1.12
R3HDM1-217ENST00000486532 MCCD1P59942 119 aaPredicted RBP8.08□□□□□ -1.12
R3HDM1-217ENST00000486532 CBLBQ13191 982 aa8.07□□□□□ -1.12
R3HDM1-217ENST00000486532 FBXO31Q5XUX0 539 aaPredicted RBP8.07□□□□□ -1.12
R3HDM1-217ENST00000486532 ZNF330Q9Y3S2 320 aaPredicted RBP8.07□□□□□ -1.12
R3HDM1-217ENST00000486532 OCSTAMPQ9BR26 566 aa8.06□□□□□ -1.12
R3HDM1-217ENST00000486532 PTSQ03393 145 aa8.05□□□□□ -1.12
R3HDM1-217ENST00000486532 RNF20Q5VTR2 975 aa8.05□□□□□ -1.12
R3HDM1-217ENST00000486532 HMX1Q9NP08 348 aaPredicted RBP8.05□□□□□ -1.12
R3HDM1-217ENST00000486532 FIGNL2A6NMB9 653 aa8.04□□□□□ -1.12
R3HDM1-217ENST00000486532 ZBBXA8MT70 800 aa8.04□□□□□ -1.12
R3HDM1-217ENST00000486532 ESPNB1AK53 854 aa8.04□□□□□ -1.12
R3HDM1-217ENST00000486532 ADH1AP07327 375 aa8.04□□□□□ -1.12
R3HDM1-217ENST00000486532 RELBQ01201 579 aa8.04□□□□□ -1.12
R3HDM1-217ENST00000486532 EPS8L1Q8TE68 723 aa8.04□□□□□ -1.12
R3HDM1-217ENST00000486532 POLMQ9NP87 494 aaPredicted RBP8.04□□□□□ -1.12
R3HDM1-217ENST00000486532 SOCS7O14512 581 aa8.03□□□□□ -1.12
R3HDM1-217ENST00000486532 BANK1Q8NDB2 785 aa8.03□□□□□ -1.12
R3HDM1-217ENST00000486532 NANOS1Q8WY41 292 aaKnown RBP8.03□□□□□ -1.12
R3HDM1-217ENST00000486532 ERVH48-1M5A8F1 160 aa8.02□□□□□ -1.13
R3HDM1-217ENST00000486532 RAB15P59190 212 aa8.02□□□□□ -1.13
R3HDM1-217ENST00000486532 KCNMA1Q12791 1236 aa8.02□□□□□ -1.13
R3HDM1-217ENST00000486532 CCDC155Q8N6L0 562 aa8.02□□□□□ -1.13
R3HDM1-217ENST00000486532 ZNF784Q8NCA9 323 aaPredicted RBP8.02□□□□□ -1.13
R3HDM1-217ENST00000486532 IL27Q8NEV9 243 aa8.02□□□□□ -1.13
R3HDM1-217ENST00000486532 PTGIRP43119 386 aa8.01□□□□□ -1.13
R3HDM1-217ENST00000486532 AGBL1Q96MI9 1066 aa8.01□□□□□ -1.13
R3HDM1-217ENST00000486532 INSM2Q96T92 566 aaPredicted RBP8.01□□□□□ -1.13
R3HDM1-217ENST00000486532 TRIM34Q9BYJ4 488 aa8.01□□□□□ -1.13
R3HDM1-217ENST00000486532 TMPRSS4Q9NRS4 437 aa8.01□□□□□ -1.13
R3HDM1-217ENST00000486532 PCDHB9Q9Y5E1 797 aa8.01□□□□□ -1.13
R3HDM1-217ENST00000486532 SLC35F4A4IF30 521 aa8□□□□□ -1.13
R3HDM1-217ENST00000486532 ITGA6P23229 1130 aa7.99□□□□□ -1.13
R3HDM1-217ENST00000486532 CTSOP43234 321 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-217ENST00000486532 SV2AQ7L0J3 742 aa7.99□□□□□ -1.13
R3HDM1-217ENST00000486532 ESF1Q9H501 851 aaKnown RBP7.99□□□□□ -1.13
R3HDM1-217ENST00000486532 ZNF395Q9H8N7 513 aaPredicted RBP7.99□□□□□ -1.13
R3HDM1-217ENST00000486532 PRM3Q9NNZ6 103 aa7.99□□□□□ -1.13
R3HDM1-217ENST00000486532 LYSMD3Q7Z3D4 306 aa7.98□□□□□ -1.13
R3HDM1-217ENST00000486532 RNF217Q8TC41 542 aa7.98□□□□□ -1.13
R3HDM1-217ENST00000486532 ATP5J2-PTCD1G3V325 749 aa7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 RNF225M0QZC1 329 aaPredicted RBP7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 LILRA1O75019 489 aa7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 GPC1P35052 558 aa7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 NR1H3Q13133 447 aa7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 KCTD17Q8N5Z5 321 aa7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 GMCL1Q96IK5 515 aa7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 NDUFB9Q9Y6M9 179 aa7.97□□□□□ -1.13
R3HDM1-217ENST00000486532 CDC14CA4D256 554 aa7.96□□□□□ -1.14
R3HDM1-217ENST00000486532 FBXO45P0C2W1 286 aa7.96□□□□□ -1.14
R3HDM1-217ENST00000486532 RNF144AP50876 292 aaPredicted RBP7.96□□□□□ -1.14
R3HDM1-217ENST00000486532 GJD4Q96KN9 370 aaPredicted RBP7.96□□□□□ -1.14
R3HDM1-217ENST00000486532 CYLDQ9NQC7 956 aa7.96□□□□□ -1.14
R3HDM1-217ENST00000486532 ADD1P35611 737 aaKnown RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms