RNA–Protein interactions for RNA: ENST00000486425.1

MUC4-222, Transcript of mucin 4, cell surface associated, human

TSL 4

Gene MUC4, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MUC4-222	ENST00000486425	SPDYE16	A6NNV3	312 aa	Predicted RBP	10.34	□□□□□ -0.75
MUC4-222	ENST00000486425	PDIA6	Q15084	440 aa		10.34	□□□□□ -0.75
MUC4-222	ENST00000486425	ZNF326	Q5BKZ1	582 aa	Known RBP	10.34	□□□□□ -0.75
MUC4-222	ENST00000486425	ADGRD1	Q6QNK2	874 aa		10.34	□□□□□ -0.75
MUC4-222	ENST00000486425	HIRIP3	Q9BW71	556 aa	Predicted RBP	10.34	□□□□□ -0.75
MUC4-222	ENST00000486425	ADAM33	Q9BZ11	813 aa		10.34	□□□□□ -0.75
MUC4-222	ENST00000486425	SLIT1	O75093	1534 aa		10.33	□□□□□ -0.76
MUC4-222	ENST00000486425	DLC1	Q96QB1	1528 aa		10.33	□□□□□ -0.76
MUC4-222	ENST00000486425	USP32	Q8NFA0	1604 aa		10.33	□□□□□ -0.76
MUC4-222	ENST00000486425	C11orf95	C9JLR9	678 aa	Predicted RBP	10.33	□□□□□ -0.76
MUC4-222	ENST00000486425	PTPRE	P23469	700 aa		10.33	□□□□□ -0.76
MUC4-222	ENST00000486425	ESF1	Q9H501	851 aa	Known RBP	10.33	□□□□□ -0.76
MUC4-222	ENST00000486425	DDX10	Q13206	875 aa	Known RBP	10.32	□□□□□ -0.76
MUC4-222	ENST00000486425	IDI1	Q13907	227 aa		10.32	□□□□□ -0.76
MUC4-222	ENST00000486425	NBPF1	Q3BBV0	1214 aa		10.32	□□□□□ -0.76
MUC4-222	ENST00000486425	TYW1B	Q6NUM6	668 aa		10.32	□□□□□ -0.76
MUC4-222	ENST00000486425	FBXW7	Q969H0	707 aa		10.32	□□□□□ -0.76
MUC4-222	ENST00000486425	LTBP4	Q8N2S1	1624 aa		10.32	□□□□□ -0.76
MUC4-222	ENST00000486425	ADGRF5	Q8IZF2	1346 aa		10.32	□□□□□ -0.76
MUC4-222	ENST00000486425	DIP2A	Q14689	1571 aa		10.31	□□□□□ -0.76
MUC4-222	ENST00000486425	TESK2	Q96S53	571 aa		10.31	□□□□□ -0.76
MUC4-222	ENST00000486425	EPAS1	Q99814	870 aa		10.31	□□□□□ -0.76
MUC4-222	ENST00000486425	IQSEC2	Q5JU85	1478 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	ARHGAP23	Q9P227	1491 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	ANKRD26	Q9UPS8	1709 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	TNR	Q92752	1358 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	CPS1	P31327	1500 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	ST20-MTHFS	A0A0A6YYL1	179 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	SLC24A1	O60721	1099 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	RNF166	Q96A37	237 aa	Predicted RBP	10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	SLC4A5	Q9BY07	1137 aa		10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	C14orf93	Q9H972	538 aa	Known RBP	10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	10.3	□□□□□ -0.76
MUC4-222	ENST00000486425	CCER2	I3L3R5	266 aa		10.29	□□□□□ -0.76
MUC4-222	ENST00000486425	HR	O43593	1189 aa		10.29	□□□□□ -0.76
MUC4-222	ENST00000486425	DDX12P	Q92771	950 aa		10.29	□□□□□ -0.76
MUC4-222	ENST00000486425	KTN1	Q86UP2	1357 aa	Known RBP	10.28	□□□□□ -0.76
MUC4-222	ENST00000486425	RIMS2	Q9UQ26	1411 aa		10.28	□□□□□ -0.76
MUC4-222	ENST00000486425	VPS9D1	Q9Y2B5	631 aa		10.28	□□□□□ -0.76
MUC4-222	ENST00000486425	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.27	□□□□□ -0.77
MUC4-222	ENST00000486425	TULP4	Q9NRJ4	1543 aa		10.27	□□□□□ -0.77
MUC4-222	ENST00000486425	ADGRB2	O60241	1585 aa		10.26	□□□□□ -0.77
MUC4-222	ENST00000486425	ARHGEF1	Q92888	912 aa	Known RBP	10.26	□□□□□ -0.77
MUC4-222	ENST00000486425	ZBED2	Q9BTP6	218 aa		10.26	□□□□□ -0.77
MUC4-222	ENST00000486425	XRN1	Q8IZH2	1706 aa	Known RBP	10.26	□□□□□ -0.77
MUC4-222	ENST00000486425	TECPR2	O15040	1411 aa		10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	MED14	O60244	1454 aa		10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	AKAP12	Q02952	1782 aa		10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	ANP32C	O43423	234 aa		10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	CFAP70	Q5T0N1	1121 aa		10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	CHD2	O14647	1828 aa	Known RBP	10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	KIF20B	Q96Q89	1820 aa		10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	TOPAZ1	Q8N9V7	1692 aa		10.25	□□□□□ -0.77
MUC4-222	ENST00000486425	PPP1R3G	B7ZBB8	358 aa		10.24	□□□□□ -0.77
MUC4-222	ENST00000486425	TMF1	P82094	1093 aa		10.24	□□□□□ -0.77
MUC4-222	ENST00000486425	KCNV2	Q8TDN2	545 aa		10.24	□□□□□ -0.77
MUC4-222	ENST00000486425	TMEM2	Q9UHN6	1383 aa		10.24	□□□□□ -0.77
MUC4-222	ENST00000486425	ITSN1	Q15811	1721 aa		10.24	□□□□□ -0.77
MUC4-222	ENST00000486425	YTHDC2	Q9H6S0	1430 aa	Known RBP	10.24	□□□□□ -0.77
MUC4-222	ENST00000486425	COL9A1	P20849	921 aa		10.23	□□□□□ -0.77
MUC4-222	ENST00000486425	C6orf132	Q5T0Z8	1188 aa		10.23	□□□□□ -0.77
MUC4-222	ENST00000486425	MON2	Q7Z3U7	1717 aa		10.22	□□□□□ -0.77
MUC4-222	ENST00000486425	NBR1	Q14596	966 aa		10.22	□□□□□ -0.77
MUC4-222	ENST00000486425	CDCA8	Q53HL2	280 aa		10.22	□□□□□ -0.77
MUC4-222	ENST00000486425	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	10.22	□□□□□ -0.77
MUC4-222	ENST00000486425	PUS7	Q96PZ0	661 aa	Known RBP	10.22	□□□□□ -0.77
MUC4-222	ENST00000486425	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	10.22	□□□□□ -0.77
MUC4-222	ENST00000486425	BHMG1	C9JSJ3	638 aa	Predicted RBP	10.21	□□□□□ -0.77
MUC4-222	ENST00000486425	EN1	Q05925	392 aa	Predicted RBP	10.21	□□□□□ -0.77
MUC4-222	ENST00000486425	RBM33	Q96EV2	1170 aa	Known RBP	10.21	□□□□□ -0.77
MUC4-222	ENST00000486425	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.21	□□□□□ -0.77
MUC4-222	ENST00000486425	CENPJ	Q9HC77	1338 aa	Predicted RBP	10.21	□□□□□ -0.78
MUC4-222	ENST00000486425	NPC1L1	Q9UHC9	1359 aa		10.21	□□□□□ -0.78
MUC4-222	ENST00000486425	PLEKHG1	Q9ULL1	1385 aa		10.21	□□□□□ -0.78
MUC4-222	ENST00000486425	FAM135B	Q49AJ0	1406 aa		10.2	□□□□□ -0.78
MUC4-222	ENST00000486425	ADAMTS13	Q76LX8	1427 aa		10.2	□□□□□ -0.78
MUC4-222	ENST00000486425	PARD3	Q8TEW0	1356 aa		10.2	□□□□□ -0.78
MUC4-222	ENST00000486425	LRPPRC	P42704	1394 aa	Known RBP	10.19	□□□□□ -0.78
MUC4-222	ENST00000486425	ABCC11	Q96J66	1382 aa		10.19	□□□□□ -0.78
MUC4-222	ENST00000486425	GRXCR2	A6NFK2	248 aa		10.19	□□□□□ -0.78
MUC4-222	ENST00000486425	HAP1	P54257	671 aa	Predicted RBP	10.19	□□□□□ -0.78
MUC4-222	ENST00000486425	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	10.19	□□□□□ -0.78
MUC4-222	ENST00000486425	NINL	Q9Y2I6	1382 aa		10.18	□□□□□ -0.78
MUC4-222	ENST00000486425	PER1	O15534	1290 aa	Predicted RBP	10.18	□□□□□ -0.78
MUC4-222	ENST00000486425	NRK	Q7Z2Y5	1582 aa		10.18	□□□□□ -0.78
MUC4-222	ENST00000486425	MAP3K7	O43318	606 aa		10.17	□□□□□ -0.78
MUC4-222	ENST00000486425	OSBP	P22059	807 aa		10.17	□□□□□ -0.78
MUC4-222	ENST00000486425	PRIM1	P49642	420 aa	Known RBP	10.17	□□□□□ -0.78
MUC4-222	ENST00000486425	HDGF	P51858	240 aa	Known RBP	10.17	□□□□□ -0.78
MUC4-222	ENST00000486425	PTCH1	Q13635	1447 aa		10.16	□□□□□ -0.78
MUC4-222	ENST00000486425	UBAP1L	F5GYI3	381 aa		10.16	□□□□□ -0.78
MUC4-222	ENST00000486425	TSR1	Q2NL82	804 aa	Known RBP	10.16	□□□□□ -0.78
MUC4-222	ENST00000486425	PROX2	Q3B8N5	592 aa		10.16	□□□□□ -0.78
MUC4-222	ENST00000486425	THEMIS	Q8N1K5	641 aa	Predicted RBP	10.16	□□□□□ -0.78
MUC4-222	ENST00000486425	NWD1	Q149M9	1564 aa		10.16	□□□□□ -0.78
MUC4-222	ENST00000486425	RGPD8	O14715	1765 aa	Predicted RBP	10.16	□□□□□ -0.78
MUC4-222	ENST00000486425	ONECUT3	O60422	494 aa	Predicted RBP	10.15	□□□□□ -0.78
MUC4-222	ENST00000486425	CENPB	P07199	599 aa	Predicted RBP	10.15	□□□□□ -0.78
MUC4-222	ENST00000486425	ANKLE2	Q86XL3	938 aa		10.15	□□□□□ -0.78
MUC4-222	ENST00000486425	SIRT1	Q96EB6	747 aa		10.15	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms