RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.44□□□□□ -0.74
GABRE-209ENST00000486255 IQCEQ6IPM2 695 aa10.44□□□□□ -0.74
GABRE-209ENST00000486255 PDCL2Q8N4E4 241 aa10.44□□□□□ -0.74
GABRE-209ENST00000486255 ZNHIT6Q9NWK9 470 aaKnown RBP10.44□□□□□ -0.74
GABRE-209ENST00000486255 USP47Q96K76 1375 aa10.43□□□□□ -0.74
GABRE-209ENST00000486255 SERPINC1P01008 464 aa10.43□□□□□ -0.74
GABRE-209ENST00000486255 GBP2P32456 591 aaPredicted RBP10.43□□□□□ -0.74
GABRE-209ENST00000486255 LTV1Q96GA3 475 aaPredicted RBP10.43□□□□□ -0.74
GABRE-209ENST00000486255 DNMT1P26358 1616 aaKnown RBP10.43□□□□□ -0.74
GABRE-209ENST00000486255 ERC2O15083 957 aa10.43□□□□□ -0.74
GABRE-209ENST00000486255 XBP1P17861 261 aa10.43□□□□□ -0.74
GABRE-209ENST00000486255 PPFIBP1Q86W92 1011 aa10.43□□□□□ -0.74
GABRE-209ENST00000486255 SHTN1A0MZ66 631 aa10.43□□□□□ -0.74
GABRE-209ENST00000486255 ZNF396Q96N95 335 aaPredicted RBP10.43□□□□□ -0.74
GABRE-209ENST00000486255 PIP4K2AP48426 406 aaPredicted RBP10.42□□□□□ -0.74
GABRE-209ENST00000486255 G3BP1Q13283 466 aaKnown RBP eCLIP10.42□□□□□ -0.74
GABRE-209ENST00000486255 TXLNBQ8N3L3 684 aa10.42□□□□□ -0.74
GABRE-209ENST00000486255 SLC26A8Q96RN1 970 aa10.42□□□□□ -0.74
GABRE-209ENST00000486255 KDM4AO75164 1064 aa10.42□□□□□ -0.74
GABRE-209ENST00000486255 PLCH2O75038 1416 aa10.42□□□□□ -0.74
GABRE-209ENST00000486255 C1orf141Q5JVX7 400 aa10.42□□□□□ -0.74
GABRE-209ENST00000486255 NUTM2DQ5VT03 806 aaPredicted RBP10.42□□□□□ -0.74
GABRE-209ENST00000486255 FMNL2Q96PY5 1086 aa10.42□□□□□ -0.74
GABRE-209ENST00000486255 API5Q9BZZ5 524 aaKnown RBP10.42□□□□□ -0.74
GABRE-209ENST00000486255 CCDC192P0DO97 292 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 CBX1P83916 185 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 PANK3Q9H999 370 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 CBFA2T2O43439 604 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 DDX11Q96FC9 970 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 SCAPERQ9BY12 1400 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 NUTM2FA1L443 756 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 RALYLQ86SE5 291 aaKnown RBP10.41□□□□□ -0.74
GABRE-209ENST00000486255 ABCA8O94911 1581 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 FAM177A1Q8N128 213 aaPredicted RBP10.41□□□□□ -0.74
GABRE-209ENST00000486255 DACH1Q9UI36 760 aa10.41□□□□□ -0.74
GABRE-209ENST00000486255 PTPRKQ15262 1439 aa10.4□□□□□ -0.74
GABRE-209ENST00000486255 LNPKQ9C0E8 428 aa10.4□□□□□ -0.74
GABRE-209ENST00000486255 IBSPP21815 317 aaPredicted RBP10.4□□□□□ -0.74
GABRE-209ENST00000486255 LUC7LQ9NQ29 371 aaKnown RBP10.4□□□□□ -0.74
GABRE-209ENST00000486255 CALCOCO1Q9P1Z2 691 aa10.4□□□□□ -0.74
GABRE-209ENST00000486255 WDR7Q9Y4E6 1490 aa10.4□□□□□ -0.74
GABRE-209ENST00000486255 MAPKBP1O60336 1514 aa10.4□□□□□ -0.74
GABRE-209ENST00000486255 ADGRL1O94910 1474 aa10.4□□□□□ -0.75
GABRE-209ENST00000486255 ANKRD30BQ9BXX2 1392 aa10.4□□□□□ -0.75
GABRE-209ENST00000486255 EIF2S2P20042 333 aaKnown RBP10.4□□□□□ -0.75
GABRE-209ENST00000486255 VPS37DQ86XT2 251 aa10.4□□□□□ -0.75
GABRE-209ENST00000486255 NF2P35240 595 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 MAP2K1Q02750 393 aaPredicted RBP10.39□□□□□ -0.75
GABRE-209ENST00000486255 CDK5RAP3Q96JB5 506 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 TNMDQ9H2S6 317 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 CNTROBQ8N137 903 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 NGEFQ8N5V2 710 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 HSP90AB4PQ58FF6 505 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 AFAP1Q8N556 730 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 ATF3P18847 181 aa10.39□□□□□ -0.75
GABRE-209ENST00000486255 NGDNQ8NEJ9 315 aaKnown RBP10.39□□□□□ -0.75
GABRE-209ENST00000486255 TXLNAP40222 546 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 CD109Q6YHK3 1445 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 ERBINQ96RT1 1412 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 DUOX2Q9NRD8 1548 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 GOLGA6L10A0A0M3HER8 536 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 ADGRL2O95490 1459 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 CCDC91Q7Z6B0 441 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 MCM2P49736 904 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 TMCO3Q6UWJ1 677 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 NECTIN2Q92692 538 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 CFAP45Q9UL16 551 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 UHRF1BP1LA0JNW5 1464 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 FANCAO15360 1455 aa10.38□□□□□ -0.75
GABRE-209ENST00000486255 FIBPO43427 364 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 AAMPQ13685 434 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 MPNDQ8N594 471 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 CCDC148Q8NFR7 591 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 CWC22Q9HCG8 908 aaKnown RBP10.37□□□□□ -0.75
GABRE-209ENST00000486255 CCDC7Q96M83 1385 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 CEBPZQ03701 1054 aaKnown RBP10.37□□□□□ -0.75
GABRE-209ENST00000486255 CEP63Q96MT8 703 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 MAGI3Q5TCQ9 1506 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 CNTLNQ9NXG0 1405 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 MICALCLQ6ZW33 695 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 SYTL4Q96C24 671 aaPredicted RBP10.37□□□□□ -0.75
GABRE-209ENST00000486255 PRKRIP1Q9H875 184 aaPredicted RBP10.37□□□□□ -0.75
GABRE-209ENST00000486255 CGNQ9P2M7 1197 aaKnown RBP10.37□□□□□ -0.75
GABRE-209ENST00000486255 STK38Q15208 465 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 WASHC4Q2M389 1173 aa10.37□□□□□ -0.75
GABRE-209ENST00000486255 LRRFIP2Q9Y608 721 aaKnown RBP10.37□□□□□ -0.75
GABRE-209ENST00000486255 APAF1O14727 1248 aa10.36□□□□□ -0.75
GABRE-209ENST00000486255 VGFO15240 615 aaPredicted RBP10.36□□□□□ -0.75
GABRE-209ENST00000486255 DDX58O95786 925 aaKnown RBP10.36□□□□□ -0.75
GABRE-209ENST00000486255 GBP3Q9H0R5 595 aa10.36□□□□□ -0.75
GABRE-209ENST00000486255 GCC2Q8IWJ2 1684 aa10.36□□□□□ -0.75
GABRE-209ENST00000486255 FYB1O15117 783 aa10.36□□□□□ -0.75
GABRE-209ENST00000486255 RBM25P49756 843 aaKnown RBP10.36□□□□□ -0.75
GABRE-209ENST00000486255 CHD1O14646 1710 aa10.36□□□□□ -0.75
GABRE-209ENST00000486255 RPRD2Q5VT52 1461 aaKnown RBP10.36□□□□□ -0.75
GABRE-209ENST00000486255 ESPNB1AK53 854 aa10.36□□□□□ -0.75
GABRE-209ENST00000486255 FAM107BQ9H098 131 aa10.36□□□□□ -0.75
GABRE-209ENST00000486255 TTC5Q8N0Z6 440 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 PDCP20941 246 aa10.35□□□□□ -0.75
GABRE-209ENST00000486255 CASQ1P31415 396 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms