RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 CRB1P82279 1406 aa25.81■■□□□ 1.72
PRPF40A-209ENST00000486100 CCER1Q8TC90 406 aaPredicted RBP25.81■■□□□ 1.72
PRPF40A-209ENST00000486100 MON2Q7Z3U7 1717 aa25.8■■□□□ 1.72
PRPF40A-209ENST00000486100 PDE3BQ13370 1112 aa25.8■■□□□ 1.72
PRPF40A-209ENST00000486100 TOM1L2Q6ZVM7 507 aa25.8■■□□□ 1.72
PRPF40A-209ENST00000486100 FAM196AQ6ZSG2 479 aa25.79■■□□□ 1.72
PRPF40A-209ENST00000486100 WDR17Q8IZU2 1322 aa25.79■■□□□ 1.72
PRPF40A-209ENST00000486100 BAG6P46379 1132 aa25.77■■□□□ 1.72
PRPF40A-209ENST00000486100 CDCA8Q53HL2 280 aa25.77■■□□□ 1.72
PRPF40A-209ENST00000486100 NFAT5O94916 1531 aa25.76■■□□□ 1.71
PRPF40A-209ENST00000486100 COL18A1P39060 1754 aa25.75■■□□□ 1.71
PRPF40A-209ENST00000486100 CSB-PGBD3P0DP91 1061 aa25.74■■□□□ 1.71
PRPF40A-209ENST00000486100 CARD10Q9BWT7 1032 aa25.73■■□□□ 1.71
PRPF40A-209ENST00000486100 ANKRD36BQ8N2N9 1353 aa25.72■■□□□ 1.71
PRPF40A-209ENST00000486100 TRIM37O94972 964 aa25.71■■□□□ 1.71
PRPF40A-209ENST00000486100 COG3Q96JB2 828 aa25.7■■□□□ 1.7
PRPF40A-209ENST00000486100 CDCA7Q9BWT1 371 aaPredicted RBP25.7■■□□□ 1.7
PRPF40A-209ENST00000486100 OVOS2A0A0J9YW53 1432 aa25.7■■□□□ 1.7
PRPF40A-209ENST00000486100 OVOS2Q6IE36 1432 aa25.7■■□□□ 1.7
PRPF40A-209ENST00000486100 EN1Q05925 392 aaPredicted RBP25.69■■□□□ 1.7
PRPF40A-209ENST00000486100 DDB1Q16531 1140 aa25.69■■□□□ 1.7
PRPF40A-209ENST00000486100 USP54Q70EL1 1684 aa25.68■■□□□ 1.7
PRPF40A-209ENST00000486100 C11orf95C9JLR9 678 aaPredicted RBP25.68■■□□□ 1.7
PRPF40A-209ENST00000486100 ABCC6O95255 1503 aa25.68■■□□□ 1.7
PRPF40A-209ENST00000486100 ERBB3P21860 1342 aa25.65■■□□□ 1.7
PRPF40A-209ENST00000486100 DISP2A7MBM2 1401 aa25.64■■□□□ 1.7
PRPF40A-209ENST00000486100 FYB1O15117 783 aa25.64■■□□□ 1.7
PRPF40A-209ENST00000486100 APBA3O96018 575 aa25.64■■□□□ 1.7
PRPF40A-209ENST00000486100 IP6K1Q92551 441 aa25.64■■□□□ 1.7
PRPF40A-209ENST00000486100 CCDC7Q96M83 1385 aa25.64■■□□□ 1.69
PRPF40A-209ENST00000486100 ANKRD24Q8TF21 1146 aa25.63■■□□□ 1.69
PRPF40A-209ENST00000486100 NLRP2Q9NX02 1062 aa25.63■■□□□ 1.69
PRPF40A-209ENST00000486100 PARP4Q9UKK3 1724 aaKnown RBP25.62■■□□□ 1.69
PRPF40A-209ENST00000486100 RGPD1P0DJD0 1748 aa25.61■■□□□ 1.69
PRPF40A-209ENST00000486100 EXOC5O00471 708 aa25.61■■□□□ 1.69
PRPF40A-209ENST00000486100 EIF4G2P78344 907 aaKnown RBP eCLIP25.61■■□□□ 1.69
PRPF40A-209ENST00000486100 EZH2Q15910 746 aaKnown RBP25.61■■□□□ 1.69
PRPF40A-209ENST00000486100 CAMKK2Q96RR4 588 aa25.61■■□□□ 1.69
PRPF40A-209ENST00000486100 GGNBP2Q9H3C7 697 aa25.6■■□□□ 1.69
PRPF40A-209ENST00000486100 RGPD5Q99666 1765 aa25.59■■□□□ 1.69
PRPF40A-209ENST00000486100 FBLN1P23142 703 aa25.59■■□□□ 1.69
PRPF40A-209ENST00000486100 MARCH10Q8NA82 808 aaPredicted RBP25.59■■□□□ 1.69
PRPF40A-209ENST00000486100 OVOS2A0A0G2JMS6 1433 aa25.59■■□□□ 1.69
PRPF40A-209ENST00000486100 MAP3K19Q56UN5 1328 aa25.59■■□□□ 1.69
PRPF40A-209ENST00000486100 CARD14Q9BXL6 1004 aa25.58■■□□□ 1.69
PRPF40A-209ENST00000486100 AMPHP49418 695 aa25.57■■□□□ 1.68
PRPF40A-209ENST00000486100 HSPA5P11021 654 aaKnown RBP25.56■■□□□ 1.68
PRPF40A-209ENST00000486100 HOXC9P31274 260 aa25.55■■□□□ 1.68
PRPF40A-209ENST00000486100 PARD3Q8TEW0 1356 aa25.55■■□□□ 1.68
PRPF40A-209ENST00000486100 IL2RBP14784 551 aa25.54■■□□□ 1.68
PRPF40A-209ENST00000486100 LTV1Q96GA3 475 aaPredicted RBP25.54■■□□□ 1.68
PRPF40A-209ENST00000486100 TNS1Q9HBL0 1735 aaKnown RBP25.54■■□□□ 1.68
PRPF40A-209ENST00000486100 LRRC37A3O60309 1634 aa25.53■■□□□ 1.68
PRPF40A-209ENST00000486100 BCL9O00512 1426 aa25.53■■□□□ 1.68
PRPF40A-209ENST00000486100 LTN1O94822 1766 aa25.52■■□□□ 1.68
PRPF40A-209ENST00000486100 RRS1Q15050 365 aaKnown RBP25.52■■□□□ 1.68
PRPF40A-209ENST00000486100 BCL11BQ9C0K0 894 aaPredicted RBP25.52■■□□□ 1.68
PRPF40A-209ENST00000486100 POLR3GLQ9BT43 218 aa25.51■■□□□ 1.67
PRPF40A-209ENST00000486100 PSDA5PKW4 1024 aaPredicted RBP25.5■■□□□ 1.67
PRPF40A-209ENST00000486100 PEAK1Q9H792 1746 aa25.49■■□□□ 1.67
PRPF40A-209ENST00000486100 NSD3Q9BZ95 1437 aa25.49■■□□□ 1.67
PRPF40A-209ENST00000486100 PLSCR1O15162 318 aa25.48■■□□□ 1.67
PRPF40A-209ENST00000486100 TNS2Q63HR2 1409 aa25.47■■□□□ 1.67
PRPF40A-209ENST00000486100 RTL1A6NKG5 1358 aa25.47■■□□□ 1.67
PRPF40A-209ENST00000486100 R3HDM1Q15032 1099 aaKnown RBP25.47■■□□□ 1.67
PRPF40A-209ENST00000486100 PTF1AQ7RTS3 328 aa25.47■■□□□ 1.67
PRPF40A-209ENST00000486100 WNK3Q9BYP7 1800 aa25.47■■□□□ 1.67
PRPF40A-209ENST00000486100 CGNL1Q0VF96 1302 aa25.45■■□□□ 1.66
PRPF40A-209ENST00000486100 SRCAPQ6ZRS2 3230 aa25.45■■□□□ 1.66
PRPF40A-209ENST00000486100 MYOM1P52179 1685 aa25.44■■□□□ 1.66
PRPF40A-209ENST00000486100 NBPF14Q5TI25 921 aa25.43■■□□□ 1.66
PRPF40A-209ENST00000486100 HSP90AB2PQ58FF8 381 aa25.42■■□□□ 1.66
PRPF40A-209ENST00000486100 KIF24Q5T7B8 1368 aa25.42■■□□□ 1.66
PRPF40A-209ENST00000486100 NBPF6Q5VWK0 638 aa25.41■■□□□ 1.66
PRPF40A-209ENST00000486100 NBPF4Q96M43 638 aa25.41■■□□□ 1.66
PRPF40A-209ENST00000486100 KCNQ2O43526 872 aa25.4■■□□□ 1.66
PRPF40A-209ENST00000486100 PANK3Q9H999 370 aa25.4■■□□□ 1.66
PRPF40A-209ENST00000486100 INSRP06213 1382 aa25.4■■□□□ 1.66
PRPF40A-209ENST00000486100 FLT4P35916 1363 aa25.39■■□□□ 1.65
PRPF40A-209ENST00000486100 DDX54Q8TDD1 881 aaKnown RBP25.38■■□□□ 1.65
PRPF40A-209ENST00000486100 ACSBG1Q96GR2 724 aa25.38■■□□□ 1.65
PRPF40A-209ENST00000486100 EMILIN1Q9Y6C2 1016 aa25.38■■□□□ 1.65
PRPF40A-209ENST00000486100 PROM2Q8N271 834 aa25.37■■□□□ 1.65
PRPF40A-209ENST00000486100 SBF2Q86WG5 1849 aa25.37■■□□□ 1.65
PRPF40A-209ENST00000486100 SMG6Q86US8 1419 aaKnown RBP25.37■■□□□ 1.65
PRPF40A-209ENST00000486100 KIF20BQ96Q89 1820 aa25.36■■□□□ 1.65
PRPF40A-209ENST00000486100 FAM208AQ9UK61 1670 aaKnown RBP25.36■■□□□ 1.65
PRPF40A-209ENST00000486100 ZCRB1Q8TBF4 217 aaKnown RBP25.35■■□□□ 1.65
PRPF40A-209ENST00000486100 RREB1Q92766 1687 aa25.34■■□□□ 1.65
PRPF40A-209ENST00000486100 PPM1GO15355 546 aaPredicted RBP25.34■■□□□ 1.65
PRPF40A-209ENST00000486100 USHBP1Q8N6Y0 703 aa25.34■■□□□ 1.65
PRPF40A-209ENST00000486100 TXNRD1Q16881 649 aa25.32■■□□□ 1.64
PRPF40A-209ENST00000486100 RAPGEF4Q8WZA2 1011 aa25.32■■□□□ 1.64
PRPF40A-209ENST00000486100 POLKQ9UBT6 870 aa25.32■■□□□ 1.64
PRPF40A-209ENST00000486100 WASHC2AQ641Q2 1341 aa25.32■■□□□ 1.64
PRPF40A-209ENST00000486100 TATP17735 454 aaPredicted RBP25.3■■□□□ 1.64
PRPF40A-209ENST00000486100 NUP188Q5SRE5 1749 aa25.29■■□□□ 1.64
PRPF40A-209ENST00000486100 MEGF6O75095 1541 aa25.29■■□□□ 1.64
PRPF40A-209ENST00000486100 TNNT2P45379 298 aaPredicted RBP25.28■■□□□ 1.64
PRPF40A-209ENST00000486100 RGPD3A6NKT7 1758 aaPredicted RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 307.2 ms