RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 TCP11L2Q8N4U5 519 aa19.09■□□□□ 0.65
COL9A1-207ENST00000486080 CRYBG1Q9Y4K1 1723 aa19.09■□□□□ 0.65
COL9A1-207ENST00000486080 KIF24Q5T7B8 1368 aa19.08■□□□□ 0.65
COL9A1-207ENST00000486080 RGPD1P0DJD0 1748 aa19.08■□□□□ 0.64
COL9A1-207ENST00000486080 ARHGEF10O15013 1369 aa19.08■□□□□ 0.64
COL9A1-207ENST00000486080 FCHSD2O94868 740 aa19.07■□□□□ 0.64
COL9A1-207ENST00000486080 ARHGEF25Q86VW2 580 aa19.07■□□□□ 0.64
COL9A1-207ENST00000486080 RSPH6AQ9H0K4 717 aa19.07■□□□□ 0.64
COL9A1-207ENST00000486080 RRP7AQ9Y3A4 280 aaKnown RBP19.07■□□□□ 0.64
COL9A1-207ENST00000486080 IP6K1Q92551 441 aa19.07■□□□□ 0.64
COL9A1-207ENST00000486080 RTL1A6NKG5 1358 aa19.07■□□□□ 0.64
COL9A1-207ENST00000486080 PRKAR2BP31323 418 aa19.05■□□□□ 0.64
COL9A1-207ENST00000486080 ZC3H6P61129 1189 aaKnown RBP19.05■□□□□ 0.64
COL9A1-207ENST00000486080 NEUROD2Q15784 382 aa19.04■□□□□ 0.64
COL9A1-207ENST00000486080 AEBP1Q8IUX7 1158 aa19.04■□□□□ 0.64
COL9A1-207ENST00000486080 LTV1Q96GA3 475 aaPredicted RBP19.04■□□□□ 0.64
COL9A1-207ENST00000486080 ZNF521Q96K83 1311 aa19.04■□□□□ 0.64
COL9A1-207ENST00000486080 CDCA7LQ96GN5 454 aa19.04■□□□□ 0.64
COL9A1-207ENST00000486080 RGPD5Q99666 1765 aa19.03■□□□□ 0.64
COL9A1-207ENST00000486080 SULT6B1Q6IMI4 303 aa19.03■□□□□ 0.64
COL9A1-207ENST00000486080 MAPK8IP3Q9UPT6 1336 aa19.03■□□□□ 0.64
COL9A1-207ENST00000486080 PHACTR3Q96KR7 559 aa19.02■□□□□ 0.64
COL9A1-207ENST00000486080 PNNQ9H307 717 aaKnown RBP19.02■□□□□ 0.64
COL9A1-207ENST00000486080 AHDC1Q5TGY3 1603 aaPredicted RBP19.02■□□□□ 0.64
COL9A1-207ENST00000486080 EYA1Q99502 592 aa19.02■□□□□ 0.63
COL9A1-207ENST00000486080 TOM1O60784 492 aa19.01■□□□□ 0.63
COL9A1-207ENST00000486080 PIP4K2BP78356 416 aa19.01■□□□□ 0.63
COL9A1-207ENST00000486080 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
COL9A1-207ENST00000486080 RGPD2P0DJD1 1756 aa19.01■□□□□ 0.63
COL9A1-207ENST00000486080 ABCA3Q99758 1704 aa19.01■□□□□ 0.63
COL9A1-207ENST00000486080 NGEFQ8N5V2 710 aa19■□□□□ 0.63
COL9A1-207ENST00000486080 AXIN2Q9Y2T1 843 aa19■□□□□ 0.63
COL9A1-207ENST00000486080 TMPOP42166 694 aaKnown RBP19■□□□□ 0.63
COL9A1-207ENST00000486080 COL18A1P39060 1754 aa18.99■□□□□ 0.63
COL9A1-207ENST00000486080 IGSF1Q8N6C5 1336 aa18.99■□□□□ 0.63
COL9A1-207ENST00000486080 WWC1Q8IX03 1113 aa18.99■□□□□ 0.63
COL9A1-207ENST00000486080 UBAP1LF5GYI3 381 aa18.98■□□□□ 0.63
COL9A1-207ENST00000486080 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
COL9A1-207ENST00000486080 PHLPP1O60346 1717 aa18.98■□□□□ 0.63
COL9A1-207ENST00000486080 KIAA0232Q92628 1395 aa18.97■□□□□ 0.63
COL9A1-207ENST00000486080 GOLGA2Q08379 1002 aa18.97■□□□□ 0.63
COL9A1-207ENST00000486080 CHRNA2Q15822 529 aa18.97■□□□□ 0.63
COL9A1-207ENST00000486080 LRRC59Q96AG4 307 aaKnown RBP18.97■□□□□ 0.63
COL9A1-207ENST00000486080 DLG5Q8TDM6 1919 aa18.96■□□□□ 0.63
COL9A1-207ENST00000486080 KDRP35968 1356 aa18.96■□□□□ 0.63
COL9A1-207ENST00000486080 NEFMP07197 916 aa18.96■□□□□ 0.63
COL9A1-207ENST00000486080 USHBP1Q8N6Y0 703 aa18.96■□□□□ 0.63
COL9A1-207ENST00000486080 SPINK5Q9NQ38 1064 aaPredicted RBP18.96■□□□□ 0.63
COL9A1-207ENST00000486080 RIPK4P57078 832 aa18.95■□□□□ 0.62
COL9A1-207ENST00000486080 CCDC27Q2M243 656 aa18.95■□□□□ 0.62
COL9A1-207ENST00000486080 NBPF6Q5VWK0 638 aa18.95■□□□□ 0.62
COL9A1-207ENST00000486080 ANKRD24Q8TF21 1146 aa18.95■□□□□ 0.62
COL9A1-207ENST00000486080 NBPF4Q96M43 638 aa18.95■□□□□ 0.62
COL9A1-207ENST00000486080 TRIM35Q9UPQ4 493 aa18.95■□□□□ 0.62
COL9A1-207ENST00000486080 CPDO75976 1380 aa18.95■□□□□ 0.62
COL9A1-207ENST00000486080 NCBP3Q53F19 620 aaKnown RBP18.95■□□□□ 0.62
COL9A1-207ENST00000486080 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-207ENST00000486080 NFE2L2Q16236 605 aa18.94■□□□□ 0.62
COL9A1-207ENST00000486080 COL16A1Q07092 1604 aaPredicted RBP18.94■□□□□ 0.62
COL9A1-207ENST00000486080 SLFN5Q08AF3 891 aa18.93■□□□□ 0.62
COL9A1-207ENST00000486080 DUSP27Q5VZP5 1158 aa18.91■□□□□ 0.62
COL9A1-207ENST00000486080 PRDM11Q9NQV5 511 aa18.91■□□□□ 0.62
COL9A1-207ENST00000486080 ERBB3P21860 1342 aa18.91■□□□□ 0.62
COL9A1-207ENST00000486080 ABCC6O95255 1503 aa18.91■□□□□ 0.62
COL9A1-207ENST00000486080 COL22A1Q8NFW1 1626 aaPredicted RBP18.91■□□□□ 0.62
COL9A1-207ENST00000486080 WDR63Q8IWG1 891 aa18.9■□□□□ 0.62
COL9A1-207ENST00000486080 SUPT16HQ9Y5B9 1047 aaKnown RBP18.9■□□□□ 0.62
COL9A1-207ENST00000486080 GTF3C3Q9Y5Q9 886 aa18.9■□□□□ 0.62
COL9A1-207ENST00000486080 TRMT2AQ8IZ69 625 aaKnown RBP18.9■□□□□ 0.62
COL9A1-207ENST00000486080 E9PSI1 815 aa18.89■□□□□ 0.61
COL9A1-207ENST00000486080 CAMTA1Q9Y6Y1 1673 aa18.89■□□□□ 0.61
COL9A1-207ENST00000486080 LMO7Q8WWI1 1683 aa18.88■□□□□ 0.61
COL9A1-207ENST00000486080 MTHFSDQ2M296 383 aaKnown RBP18.88■□□□□ 0.61
COL9A1-207ENST00000486080 NCAPD2Q15021 1401 aa18.87■□□□□ 0.61
COL9A1-207ENST00000486080 FAM83GA6ND36 823 aa18.86■□□□□ 0.61
COL9A1-207ENST00000486080 THUMPD2Q9BTF0 503 aaKnown RBP18.86■□□□□ 0.61
COL9A1-207ENST00000486080 NLRP2Q9NX02 1062 aa18.86■□□□□ 0.61
COL9A1-207ENST00000486080 CSB-PGBD3P0DP91 1061 aa18.85■□□□□ 0.61
COL9A1-207ENST00000486080 FBXO41Q8TF61 875 aa18.85■□□□□ 0.61
COL9A1-207ENST00000486080 FAM208AQ9UK61 1670 aaKnown RBP18.85■□□□□ 0.61
COL9A1-207ENST00000486080 DCTN1Q14203 1278 aa18.84■□□□□ 0.61
COL9A1-207ENST00000486080 COL5A2P05997 1499 aaPredicted RBP18.82■□□□□ 0.6
COL9A1-207ENST00000486080 LMOD3Q0VAK6 560 aa18.82■□□□□ 0.6
COL9A1-207ENST00000486080 RCAN3Q9UKA8 241 aa18.82■□□□□ 0.6
COL9A1-207ENST00000486080 IL16Q14005 1332 aa18.82■□□□□ 0.6
COL9A1-207ENST00000486080 GAS2L2Q8NHY3 880 aa18.81■□□□□ 0.6
COL9A1-207ENST00000486080 TSR2Q969E8 191 aaKnown RBP18.81■□□□□ 0.6
COL9A1-207ENST00000486080 MCM10Q7L590 875 aa18.81■□□□□ 0.6
COL9A1-207ENST00000486080 COL14A1Q05707 1796 aaKnown RBP18.8■□□□□ 0.6
COL9A1-207ENST00000486080 MYH16Q9H6N6 1097 aa18.8■□□□□ 0.6
COL9A1-207ENST00000486080 WDR17Q8IZU2 1322 aa18.8■□□□□ 0.6
COL9A1-207ENST00000486080 STRN4Q9NRL3 753 aa18.79■□□□□ 0.6
COL9A1-207ENST00000486080 FANCIQ9NVI1 1328 aa18.79■□□□□ 0.6
COL9A1-207ENST00000486080 LAS1LQ9Y4W2 734 aaKnown RBP18.79■□□□□ 0.6
COL9A1-207ENST00000486080 NUTM2BA6NNL0 878 aaPredicted RBP18.78■□□□□ 0.6
COL9A1-207ENST00000486080 NUTM2EB1AL46 878 aaPredicted RBP18.78■□□□□ 0.6
COL9A1-207ENST00000486080 ADAMTS2O95450 1211 aa18.78■□□□□ 0.6
COL9A1-207ENST00000486080 NUTM2AQ8IVF1 878 aaPredicted RBP18.78■□□□□ 0.6
COL9A1-207ENST00000486080 BTG4Q9NY30 223 aa18.78■□□□□ 0.6
COL9A1-207ENST00000486080 TOM1L2Q6ZVM7 507 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms