RNA–Protein interactions for RNA: ENST00000485567.1

FN1-222, Transcript of fibronectin 1, humanhuman

TSL 1 (best)

Gene FN1, Length 584 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-222ENST00000485567 POTEGQ6S5H5 508 aa7.22□□□□□ -1.25
FN1-222ENST00000485567 DEPDC4Q8N2C3 294 aa7.22□□□□□ -1.25
FN1-222ENST00000485567 GZF1Q9H116 711 aaPredicted RBP7.22□□□□□ -1.25
FN1-222ENST00000485567 NOVA2Q9UNW9 492 aaKnown RBP7.22□□□□□ -1.25
FN1-222ENST00000485567 FCF1Q9Y324 198 aaKnown RBP7.22□□□□□ -1.25
FN1-222ENST00000485567 CARNS1A5YM72 827 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 RASA1P20936 1047 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 PTK7Q13308 1070 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 AGERQ15109 404 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 EML3Q32P44 896 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 TRIM50Q86XT4 487 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 CDCA7Q9BWT1 371 aaPredicted RBP7.21□□□□□ -1.26
FN1-222ENST00000485567 C1QTNF2Q9BXJ5 285 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 CDV3Q9UKY7 258 aaKnown RBP7.21□□□□□ -1.26
FN1-222ENST00000485567 ZMIZ1Q9ULJ6 1067 aa7.21□□□□□ -1.26
FN1-222ENST00000485567 MAGEB6P1A0A0J9YX57 407 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L15C9J2P7 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L10C9JJH3 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L13C9JLJ4 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L12C9JPN9 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L11C9JVI0 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L21D6R901 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L18D6R9N7 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L22D6RA61 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L17D6RBQ6 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L19D6RCP7 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L20D6RJB6 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 ITGBL1O95965 494 aaPredicted RBP7.2□□□□□ -1.26
FN1-222ENST00000485567 KCNC4Q03721 635 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 USP17L24Q0WX57 530 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 CRTC2Q53ET0 693 aaPredicted RBP7.2□□□□□ -1.26
FN1-222ENST00000485567 C4orf48Q5BLP8 95 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 TMEM164Q5U3C3 297 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 TRMT44Q8IYL2 757 aaKnown RBP7.2□□□□□ -1.26
FN1-222ENST00000485567 FOXJ1Q92949 421 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 CARD14Q9BXL6 1004 aa7.2□□□□□ -1.26
FN1-222ENST00000485567 ESPNB1AK53 854 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 GIGYF1O75420 1035 aaPredicted RBP7.19□□□□□ -1.26
FN1-222ENST00000485567 ATP1A2P50993 1020 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 SH3BP2P78314 561 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 TSGA10IPQ3SY00 556 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 LINC01559Q495D7 138 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 TMCO4Q5TGY1 634 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 SEPT12Q8IYM1 358 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 FAM200AQ8TCP9 573 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 STK32AQ8WU08 396 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 HCSTQ9UBK5 93 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 DOLKQ9UPQ8 538 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 NOD1Q9Y239 953 aa7.19□□□□□ -1.26
FN1-222ENST00000485567 GGCXP38435 758 aa7.18□□□□□ -1.26
FN1-222ENST00000485567 NBPF20Q3BBV1 942 aa7.18□□□□□ -1.26
FN1-222ENST00000485567 ANKMY2Q8IV38 441 aa7.18□□□□□ -1.26
FN1-222ENST00000485567 LARGE2Q8N3Y3 721 aa7.18□□□□□ -1.26
FN1-222ENST00000485567 OGFOD1Q8N543 542 aa7.18□□□□□ -1.26
FN1-222ENST00000485567 SLC10A4Q96EP9 437 aa7.18□□□□□ -1.26
FN1-222ENST00000485567 CCDC85AQ96PX6 553 aaPredicted RBP7.18□□□□□ -1.26
FN1-222ENST00000485567 PCDH10Q9P2E7 1040 aa7.18□□□□□ -1.26
FN1-222ENST00000485567 GNEQ9Y223 722 aaKnown RBP7.18□□□□□ -1.26
FN1-222ENST00000485567 ZBTB24O43167 697 aaPredicted RBP7.17□□□□□ -1.26
FN1-222ENST00000485567 ANKLE1Q8NAG6 615 aa7.17□□□□□ -1.26
FN1-222ENST00000485567 SIRT1Q96EB6 747 aa7.17□□□□□ -1.26
FN1-222ENST00000485567 DNAAF2Q9NVR5 837 aaKnown RBP7.17□□□□□ -1.26
FN1-222ENST00000485567 ZBTB7BO15156 539 aaPredicted RBP7.16□□□□□ -1.26
FN1-222ENST00000485567 CLDN10P78369 228 aa7.16□□□□□ -1.26
FN1-222ENST00000485567 FAM69CQ0P6D2 419 aa7.16□□□□□ -1.26
FN1-222ENST00000485567 USP4Q13107 963 aa7.16□□□□□ -1.26
FN1-222ENST00000485567 CLP1Q92989 425 aaKnown RBP7.16□□□□□ -1.26
FN1-222ENST00000485567 RNF223E7ERA6 249 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 PPEF1O14829 653 aaPredicted RBP7.15□□□□□ -1.26
FN1-222ENST00000485567 DKK1O94907 266 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 VARSP26640 1264 aaKnown RBP7.15□□□□□ -1.26
FN1-222ENST00000485567 SSFA2P28290 1259 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 RPIAP49247 311 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 WNT7BP56706 349 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 DPYDQ12882 1025 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 SWI5Q1ZZU3 235 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 SIX5Q8N196 739 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 IVNS1ABPQ9Y6Y0 642 aa7.15□□□□□ -1.26
FN1-222ENST00000485567 TRIM32Q13049 653 aa7.14□□□□□ -1.27
FN1-222ENST00000485567 PHLDB3Q6NSJ2 640 aa7.14□□□□□ -1.27
FN1-222ENST00000485567 MAP4K5Q9Y4K4 846 aa7.14□□□□□ -1.27
FN1-222ENST00000485567 MFAP1P55081 439 aaKnown RBP7.13□□□□□ -1.27
FN1-222ENST00000485567 GTF2IP78347 998 aa7.13□□□□□ -1.27
FN1-222ENST00000485567 OXLD1Q5BKU9 147 aa7.13□□□□□ -1.27
FN1-222ENST00000485567 TXNDC2Q86VQ3 553 aa7.13□□□□□ -1.27
FN1-222ENST00000485567 CCER1Q8TC90 406 aaPredicted RBP7.13□□□□□ -1.27
FN1-222ENST00000485567 PCDHGA11Q9Y5H2 935 aa7.13□□□□□ -1.27
FN1-222ENST00000485567 ARID4AP29374 1257 aaPredicted RBP7.12□□□□□ -1.27
FN1-222ENST00000485567 SEC13P55735 322 aa7.12□□□□□ -1.27
FN1-222ENST00000485567 NPM2Q86SE8 214 aaKnown RBP7.12□□□□□ -1.27
FN1-222ENST00000485567 RGS22Q8NE09 1264 aa7.12□□□□□ -1.27
FN1-222ENST00000485567 TRIM52Q96A61 297 aa7.12□□□□□ -1.27
FN1-222ENST00000485567 KCTD15Q96SI1 283 aaPredicted RBP7.12□□□□□ -1.27
FN1-222ENST00000485567 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.12□□□□□ -1.27
FN1-222ENST00000485567 SLAIN2Q9P270 581 aa7.12□□□□□ -1.27
FN1-222ENST00000485567 PCDHB11Q9Y5F2 797 aa7.12□□□□□ -1.27
FN1-222ENST00000485567 CD2BP2O95400 341 aaKnown RBP7.11□□□□□ -1.27
FN1-222ENST00000485567 SKOR1P84550 965 aa7.11□□□□□ -1.27
FN1-222ENST00000485567 PLA2G2CQ5R387 149 aa7.11□□□□□ -1.27
FN1-222ENST00000485567 CCDC102BQ68D86 513 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms