RNA–Protein interactions for RNA: ENST00000485265.1

CTNNB1-214, Transcript of catenin beta 1, humanhuman

TSL 2

Gene CTNNB1, Length 835 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-214ENST00000485265 TRIM47Q96LD4 638 aa12.03□□□□□ -0.48
CTNNB1-214ENST00000485265 KCTD15Q96SI1 283 aaPredicted RBP12.03□□□□□ -0.48
CTNNB1-214ENST00000485265 SENP2Q9HC62 589 aa12.03□□□□□ -0.48
CTNNB1-214ENST00000485265 CCDC116Q8IYX3 515 aa12.01□□□□□ -0.49
CTNNB1-214ENST00000485265 ZNF775Q96BV0 537 aaPredicted RBP12.01□□□□□ -0.49
CTNNB1-214ENST00000485265 SNRPBP14678 240 aaKnown RBP12□□□□□ -0.49
CTNNB1-214ENST00000485265 NDUFB9Q9Y6M9 179 aa12□□□□□ -0.49
CTNNB1-214ENST00000485265 ZBBXA8MT70 800 aa11.99□□□□□ -0.49
CTNNB1-214ENST00000485265 FBXO45P0C2W1 286 aa11.99□□□□□ -0.49
CTNNB1-214ENST00000485265 MRPL14Q6P1L8 145 aaKnown RBP11.99□□□□□ -0.49
CTNNB1-214ENST00000485265 KIFC2Q96AC6 838 aa11.99□□□□□ -0.49
CTNNB1-214ENST00000485265 INTS6LQ5JSJ4 861 aaKnown RBP11.98□□□□□ -0.49
CTNNB1-214ENST00000485265 EMILIN1Q9Y6C2 1016 aa11.98□□□□□ -0.49
CTNNB1-214ENST00000485265 APBB1O00213 710 aa11.97□□□□□ -0.49
CTNNB1-214ENST00000485265 NBPF20Q3BBV1 942 aa11.97□□□□□ -0.49
CTNNB1-214ENST00000485265 PPP1R26Q5T8A7 1209 aaPredicted RBP11.97□□□□□ -0.49
CTNNB1-214ENST00000485265 DZIP3Q86Y13 1208 aaKnown RBP11.97□□□□□ -0.49
CTNNB1-214ENST00000485265 ZFP42Q96MM3 310 aa11.97□□□□□ -0.49
CTNNB1-214ENST00000485265 MEIOBQ8N635 442 aa11.95□□□□□ -0.5
CTNNB1-214ENST00000485265 ESPNB1AK53 854 aa11.93□□□□□ -0.5
CTNNB1-214ENST00000485265 DHX9Q08211 1270 aaKnown RBP11.93□□□□□ -0.5
CTNNB1-214ENST00000485265 NR1H3Q13133 447 aa11.93□□□□□ -0.5
CTNNB1-214ENST00000485265 PURBQ96QR8 312 aaKnown RBP11.93□□□□□ -0.5
CTNNB1-214ENST00000485265 TBC1D2BQ9UPU7 963 aa11.93□□□□□ -0.5
CTNNB1-214ENST00000485265 PGPEP1Q9NXJ5 209 aa11.92□□□□□ -0.5
CTNNB1-214ENST00000485265 SCARF1Q14162 830 aa11.91□□□□□ -0.5
CTNNB1-214ENST00000485265 MCM6Q14566 821 aa11.9□□□□□ -0.5
CTNNB1-214ENST00000485265 Q6ZVU0 165 aa11.9□□□□□ -0.5
CTNNB1-214ENST00000485265 LINC00528Q8N1L1 170 aa11.9□□□□□ -0.5
CTNNB1-214ENST00000485265 PCDHB9Q9Y5E1 797 aa11.9□□□□□ -0.5
CTNNB1-214ENST00000485265 CBLBQ13191 982 aa11.89□□□□□ -0.51
CTNNB1-214ENST00000485265 TMPRSS4Q9NRS4 437 aa11.89□□□□□ -0.51
CTNNB1-214ENST00000485265 ERVH48-1M5A8F1 160 aa11.88□□□□□ -0.51
CTNNB1-214ENST00000485265 RAB15P59190 212 aa11.88□□□□□ -0.51
CTNNB1-214ENST00000485265 C6orf118Q5T5N4 469 aa11.88□□□□□ -0.51
CTNNB1-214ENST00000485265 SEPT12Q8IYM1 358 aa11.88□□□□□ -0.51
CTNNB1-214ENST00000485265 GIGYF1O75420 1035 aaPredicted RBP11.87□□□□□ -0.51
CTNNB1-214ENST00000485265 IRF5Q13568 498 aa11.87□□□□□ -0.51
CTNNB1-214ENST00000485265 ZNF784Q8NCA9 323 aaPredicted RBP11.87□□□□□ -0.51
CTNNB1-214ENST00000485265 TSEN34Q9BSV6 310 aaKnown RBP11.86□□□□□ -0.51
CTNNB1-214ENST00000485265 UPP2O95045 317 aa11.85□□□□□ -0.51
CTNNB1-214ENST00000485265 BMP2P12643 396 aa11.85□□□□□ -0.51
CTNNB1-214ENST00000485265 LCE2AQ5TA79 106 aaPredicted RBP11.85□□□□□ -0.51
CTNNB1-214ENST00000485265 PRM3Q9NNZ6 103 aa11.85□□□□□ -0.51
CTNNB1-214ENST00000485265 ZNF330Q9Y3S2 320 aaPredicted RBP11.85□□□□□ -0.51
CTNNB1-214ENST00000485265 LILRA1O75019 489 aa11.84□□□□□ -0.51
CTNNB1-214ENST00000485265 MCCD1P59942 119 aaPredicted RBP11.84□□□□□ -0.51
CTNNB1-214ENST00000485265 GDPD2Q9HCC8 539 aa11.84□□□□□ -0.51
CTNNB1-214ENST00000485265 TMEM132AQ24JP5 1023 aa11.83□□□□□ -0.52
CTNNB1-214ENST00000485265 NFX1Q12986 1120 aaKnown RBP11.82□□□□□ -0.52
CTNNB1-214ENST00000485265 TREML4Q6UXN2 200 aa11.82□□□□□ -0.52
CTNNB1-214ENST00000485265 ZNF592Q92610 1267 aa11.82□□□□□ -0.52
CTNNB1-214ENST00000485265 SOS2Q07890 1332 aaPredicted RBP11.82□□□□□ -0.52
CTNNB1-214ENST00000485265 SOBPA7XYQ1 873 aa11.81□□□□□ -0.52
CTNNB1-214ENST00000485265 ADD1P35611 737 aaKnown RBP11.81□□□□□ -0.52
CTNNB1-214ENST00000485265 TERTO14746 1132 aaKnown RBP11.8□□□□□ -0.52
CTNNB1-214ENST00000485265 AGBL1Q96MI9 1066 aa11.8□□□□□ -0.52
CTNNB1-214ENST00000485265 SPINT1O43278 529 aa11.79□□□□□ -0.52
CTNNB1-214ENST00000485265 ADH1AP07327 375 aa11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 ABL2P42684 1182 aa11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 RNF20Q5VTR2 975 aa11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 CCDC125Q86Z20 511 aa11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 KDF1Q8NAX2 398 aaPredicted RBP11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 CYLDQ9NQC7 956 aa11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 NXF1Q9UBU9 619 aaKnown RBP11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
CTNNB1-214ENST00000485265 WFS1O76024 890 aa11.77□□□□□ -0.53
CTNNB1-214ENST00000485265 RELBQ01201 579 aa11.77□□□□□ -0.53
CTNNB1-214ENST00000485265 CEP126Q9P2H0 1117 aa11.77□□□□□ -0.53
CTNNB1-214ENST00000485265 COG6Q9Y2V7 657 aa11.77□□□□□ -0.53
CTNNB1-214ENST00000485265 MAN1A2O60476 641 aa11.76□□□□□ -0.53
CTNNB1-214ENST00000485265 VAC14Q08AM6 782 aa11.76□□□□□ -0.53
CTNNB1-214ENST00000485265 LCE2CQ5TA81 110 aa11.76□□□□□ -0.53
CTNNB1-214ENST00000485265 TTLL8A6PVC2 850 aa11.75□□□□□ -0.53
CTNNB1-214ENST00000485265 EIF4G2P78344 907 aaKnown RBP eCLIP11.75□□□□□ -0.53
CTNNB1-214ENST00000485265 ERVK-9P63128 1117 aa11.74□□□□□ -0.53
CTNNB1-214ENST00000485265 NPAS3Q8IXF0 933 aa11.73□□□□□ -0.53
CTNNB1-214ENST00000485265 TRIM52Q96A61 297 aa11.73□□□□□ -0.53
CTNNB1-214ENST00000485265 ZNF395Q9H8N7 513 aaPredicted RBP11.73□□□□□ -0.53
CTNNB1-214ENST00000485265 PCDHB11Q9Y5F2 797 aa11.73□□□□□ -0.53
CTNNB1-214ENST00000485265 PTGIRP43119 386 aa11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 CTSOP43234 321 aaPredicted RBP11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 SCTRP47872 440 aa11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 FLIIQ13045 1269 aa11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 WASHC4Q2M389 1173 aa11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 CC2D2BQ6DHV5 1058 aa11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 POM121Q96HA1 1249 aa11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 INSM2Q96T92 566 aaPredicted RBP11.72□□□□□ -0.53
CTNNB1-214ENST00000485265 CCDC85AQ96PX6 553 aaPredicted RBP11.71□□□□□ -0.53
CTNNB1-214ENST00000485265 H3BM21 787 aa11.7□□□□□ -0.54
CTNNB1-214ENST00000485265 VEGFBP49765 207 aa11.7□□□□□ -0.54
CTNNB1-214ENST00000485265 PHTF2Q8N3S3 785 aa11.7□□□□□ -0.54
CTNNB1-214ENST00000485265 FIGNL2A6NMB9 653 aa11.69□□□□□ -0.54
CTNNB1-214ENST00000485265 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.69□□□□□ -0.541e-6■■□□□ 13.7
CTNNB1-214ENST00000485265 ATP5J2-PTCD1G3V325 749 aa11.68□□□□□ -0.54
CTNNB1-214ENST00000485265 RNF217Q8TC41 542 aa11.68□□□□□ -0.54
CTNNB1-214ENST00000485265 POLMQ9NP87 494 aaPredicted RBP11.68□□□□□ -0.54
CTNNB1-214ENST00000485265 TRAK2O60296 914 aa11.67□□□□□ -0.54
CTNNB1-214ENST00000485265 FOXD4L5Q5VV16 416 aaPredicted RBP11.67□□□□□ -0.54
CTNNB1-214ENST00000485265 SLC16A10Q8TF71 515 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms