RNA–Protein interactions for RNA: ENST00000485092.5

SDHB-206, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-206ENST00000485092 NBPF20Q3BBV1 942 aa10.2□□□□□ -0.78
SDHB-206ENST00000485092 DZIP3Q86Y13 1208 aaKnown RBP10.2□□□□□ -0.78
SDHB-206ENST00000485092 CCDC116Q8IYX3 515 aa10.2□□□□□ -0.78
SDHB-206ENST00000485092 BMP1P13497 986 aa10.19□□□□□ -0.78
SDHB-206ENST00000485092 ITPKCQ96DU7 683 aa10.19□□□□□ -0.78
SDHB-206ENST00000485092 PRM3Q9NNZ6 103 aa10.19□□□□□ -0.78
SDHB-206ENST00000485092 EMILIN1Q9Y6C2 1016 aa10.19□□□□□ -0.78
SDHB-206ENST00000485092 FBXO45P0C2W1 286 aa10.18□□□□□ -0.78
SDHB-206ENST00000485092 KIFC2Q96AC6 838 aa10.18□□□□□ -0.78
SDHB-206ENST00000485092 ZFAND3Q9H8U3 227 aa10.18□□□□□ -0.78
SDHB-206ENST00000485092 DHX9Q08211 1270 aaKnown RBP10.17□□□□□ -0.78
SDHB-206ENST00000485092 TRIM46Q7Z4K8 759 aa10.17□□□□□ -0.78
SDHB-206ENST00000485092 TRIM47Q96LD4 638 aa10.17□□□□□ -0.78
SDHB-206ENST00000485092 PGPEP1Q9NXJ5 209 aa10.16□□□□□ -0.78
SDHB-206ENST00000485092 PCDHB9Q9Y5E1 797 aa10.16□□□□□ -0.78
SDHB-206ENST00000485092 NR1H3Q13133 447 aa10.15□□□□□ -0.78
SDHB-206ENST00000485092 SCARF1Q14162 830 aa10.15□□□□□ -0.78
SDHB-206ENST00000485092 INTS6LQ5JSJ4 861 aaKnown RBP10.15□□□□□ -0.78
SDHB-206ENST00000485092 PPP1R26Q5T8A7 1209 aaPredicted RBP10.15□□□□□ -0.78
SDHB-206ENST00000485092 MRPL14Q6P1L8 145 aaKnown RBP10.15□□□□□ -0.78
SDHB-206ENST00000485092 ZNF330Q9Y3S2 320 aaPredicted RBP10.15□□□□□ -0.78
SDHB-206ENST00000485092 GPR37L1O60883 481 aa10.14□□□□□ -0.79
SDHB-206ENST00000485092 TBC1D2BQ9UPU7 963 aa10.14□□□□□ -0.79
SDHB-206ENST00000485092 SNRPBP14678 240 aaKnown RBP10.13□□□□□ -0.79
SDHB-206ENST00000485092 TMEM132AQ24JP5 1023 aa10.13□□□□□ -0.79
SDHB-206ENST00000485092 ZNF592Q92610 1267 aa10.13□□□□□ -0.79
SDHB-206ENST00000485092 UPP2O95045 317 aa10.12□□□□□ -0.79
SDHB-206ENST00000485092 RAB15P59190 212 aa10.12□□□□□ -0.79
SDHB-206ENST00000485092 MCM6Q14566 821 aa10.12□□□□□ -0.79
SDHB-206ENST00000485092 MEIOBQ8N635 442 aa10.12□□□□□ -0.79
SDHB-206ENST00000485092 ESPNB1AK53 854 aa10.11□□□□□ -0.79
SDHB-206ENST00000485092 MCCD1P59942 119 aaPredicted RBP10.11□□□□□ -0.79
SDHB-206ENST00000485092 SEPT12Q8IYM1 358 aa10.11□□□□□ -0.79
SDHB-206ENST00000485092 ZFP42Q96MM3 310 aa10.11□□□□□ -0.79
SDHB-206ENST00000485092 PURBQ96QR8 312 aaKnown RBP10.11□□□□□ -0.79
SDHB-206ENST00000485092 ZNF775Q96BV0 537 aaPredicted RBP10.1□□□□□ -0.79
SDHB-206ENST00000485092 C6orf118Q5T5N4 469 aa10.09□□□□□ -0.79
SDHB-206ENST00000485092 ERVH48-1M5A8F1 160 aa10.08□□□□□ -0.8
SDHB-206ENST00000485092 LINC00528Q8N1L1 170 aa10.08□□□□□ -0.8
SDHB-206ENST00000485092 TRIM52Q96A61 297 aa10.08□□□□□ -0.8
SDHB-206ENST00000485092 TSEN34Q9BSV6 310 aaKnown RBP10.08□□□□□ -0.8
SDHB-206ENST00000485092 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
SDHB-206ENST00000485092 GIGYF1O75420 1035 aaPredicted RBP10.07□□□□□ -0.8
SDHB-206ENST00000485092 BMP2P12643 396 aa10.07□□□□□ -0.8
SDHB-206ENST00000485092 CBLBQ13191 982 aa10.07□□□□□ -0.8
SDHB-206ENST00000485092 TMPRSS4Q9NRS4 437 aa10.07□□□□□ -0.8
SDHB-206ENST00000485092 ABL2P42684 1182 aa10.06□□□□□ -0.8
SDHB-206ENST00000485092 RNF20Q5VTR2 975 aa10.06□□□□□ -0.8
SDHB-206ENST00000485092 Q6ZVU0 165 aa10.06□□□□□ -0.8
SDHB-206ENST00000485092 CCDC125Q86Z20 511 aa10.06□□□□□ -0.8
SDHB-206ENST00000485092 ZNF784Q8NCA9 323 aaPredicted RBP10.06□□□□□ -0.8
SDHB-206ENST00000485092 IRF5Q13568 498 aa10.05□□□□□ -0.8
SDHB-206ENST00000485092 EIF4G2P78344 907 aaKnown RBP eCLIP10.04□□□□□ -0.8
SDHB-206ENST00000485092 FLIIQ13045 1269 aa10.04□□□□□ -0.8
SDHB-206ENST00000485092 WASHC4Q2M389 1173 aa10.02□□□□□ -0.81
SDHB-206ENST00000485092 CYLDQ9NQC7 956 aa10.02□□□□□ -0.81
SDHB-206ENST00000485092 LILRA1O75019 489 aa10.01□□□□□ -0.81
SDHB-206ENST00000485092 VAC14Q08AM6 782 aa10.01□□□□□ -0.81
SDHB-206ENST00000485092 COG6Q9Y2V7 657 aa10.01□□□□□ -0.81
SDHB-206ENST00000485092 MAN1A2O60476 641 aa10□□□□□ -0.81
SDHB-206ENST00000485092 RELBQ01201 579 aa10□□□□□ -0.81
SDHB-206ENST00000485092 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
SDHB-206ENST00000485092 CEP126Q9P2H0 1117 aa10□□□□□ -0.81
SDHB-206ENST00000485092 SPINT1O43278 529 aa9.99□□□□□ -0.81
SDHB-206ENST00000485092 RAD21O60216 631 aa9.99□□□□□ -0.81
SDHB-206ENST00000485092 ADH1AP07327 375 aa9.99□□□□□ -0.81
SDHB-206ENST00000485092 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
SDHB-206ENST00000485092 PCDHB11Q9Y5F2 797 aa9.99□□□□□ -0.81
SDHB-206ENST00000485092 SOBPA7XYQ1 873 aa9.98□□□□□ -0.81
SDHB-206ENST00000485092 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
SDHB-206ENST00000485092 ADD1P35611 737 aaKnown RBP9.98□□□□□ -0.81
SDHB-206ENST00000485092 SOS2Q07890 1332 aaPredicted RBP9.98□□□□□ -0.81
SDHB-206ENST00000485092 TTLL8A6PVC2 850 aa9.97□□□□□ -0.81
SDHB-206ENST00000485092 TERTO14746 1132 aaKnown RBP9.97□□□□□ -0.81
SDHB-206ENST00000485092 CC2D2BQ6DHV5 1058 aa9.97□□□□□ -0.81
SDHB-206ENST00000485092 TREML4Q6UXN2 200 aa9.97□□□□□ -0.81
SDHB-206ENST00000485092 ERVK-9P63128 1117 aa9.96□□□□□ -0.82
SDHB-206ENST00000485092 ESF1Q9H501 851 aaKnown RBP9.96□□□□□ -0.82
SDHB-206ENST00000485092 NXF1Q9UBU9 619 aaKnown RBP9.96□□□□□ -0.82
SDHB-206ENST00000485092 WFS1O76024 890 aa9.95□□□□□ -0.82
SDHB-206ENST00000485092 SOX11P35716 441 aa9.95□□□□□ -0.82
SDHB-206ENST00000485092 PTGIRP43119 386 aa9.95□□□□□ -0.82
SDHB-206ENST00000485092 SLFNL1Q499Z3 407 aa9.95□□□□□ -0.82
SDHB-206ENST00000485092 POM121Q96HA1 1249 aa9.95□□□□□ -0.82
SDHB-206ENST00000485092 INSM2Q96T92 566 aaPredicted RBP9.95□□□□□ -0.82
SDHB-206ENST00000485092 ZNF395Q9H8N7 513 aaPredicted RBP9.95□□□□□ -0.82
SDHB-206ENST00000485092 DNMT3LQ9UJW3 386 aa9.95□□□□□ -0.82
SDHB-206ENST00000485092 ATP5J2-PTCD1G3V325 749 aa9.94□□□□□ -0.82
SDHB-206ENST00000485092 SEMA3FQ13275 785 aa9.94□□□□□ -0.82
SDHB-206ENST00000485092 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.94□□□□□ -0.82
SDHB-206ENST00000485092 POLMQ9NP87 494 aaPredicted RBP9.94□□□□□ -0.82
SDHB-206ENST00000485092 NFX1Q12986 1120 aaKnown RBP9.93□□□□□ -0.82
SDHB-206ENST00000485092 RNF135Q8IUD6 432 aa9.93□□□□□ -0.82
SDHB-206ENST00000485092 NPAS3Q8IXF0 933 aa9.93□□□□□ -0.82
SDHB-206ENST00000485092 CTSOP43234 321 aaPredicted RBP9.92□□□□□ -0.82
SDHB-206ENST00000485092 SCTRP47872 440 aa9.92□□□□□ -0.82
SDHB-206ENST00000485092 KDF1Q8NAX2 398 aaPredicted RBP9.92□□□□□ -0.82
SDHB-206ENST00000485092 SLC16A10Q8TF71 515 aa9.92□□□□□ -0.82
SDHB-206ENST00000485092 CCDC85AQ96PX6 553 aaPredicted RBP9.92□□□□□ -0.82
SDHB-206ENST00000485092 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms