RNA–Protein interactions for RNA: ENST00000484990.1

COL13A1-209, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 360 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-209ENST00000484990 SBF2Q86WG5 1849 aa16.55■□□□□ 0.24
COL13A1-209ENST00000484990 ARHGEF25Q86VW2 580 aa16.55■□□□□ 0.24
COL13A1-209ENST00000484990 MARCH10Q8NA82 808 aaPredicted RBP16.55■□□□□ 0.24
COL13A1-209ENST00000484990 CARD10Q9BWT7 1032 aa16.55■□□□□ 0.24
COL13A1-209ENST00000484990 SLIT3O75094 1523 aa16.54■□□□□ 0.24
COL13A1-209ENST00000484990 TTC21BQ7Z4L5 1316 aa16.53■□□□□ 0.24
COL13A1-209ENST00000484990 PROM2Q8N271 834 aa16.53■□□□□ 0.24
COL13A1-209ENST00000484990 STK32BQ9NY57 414 aa16.53■□□□□ 0.24
COL13A1-209ENST00000484990 RGPD3A6NKT7 1758 aaPredicted RBP16.53■□□□□ 0.24
COL13A1-209ENST00000484990 RGPD4Q7Z3J3 1758 aa16.53■□□□□ 0.24
COL13A1-209ENST00000484990 PEAK1Q9H792 1746 aa16.53■□□□□ 0.24
COL13A1-209ENST00000484990 BCL9O00512 1426 aa16.53■□□□□ 0.24
COL13A1-209ENST00000484990 QRICH2Q9H0J4 1663 aa16.53■□□□□ 0.24
COL13A1-209ENST00000484990 TTC21AQ8NDW8 1320 aa16.52■□□□□ 0.24
COL13A1-209ENST00000484990 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
COL13A1-209ENST00000484990 SOX12O15370 315 aa16.51■□□□□ 0.23
COL13A1-209ENST00000484990 TXNRD1Q16881 649 aa16.51■□□□□ 0.23
COL13A1-209ENST00000484990 PTF1AQ7RTS3 328 aa16.51■□□□□ 0.23
COL13A1-209ENST00000484990 ANO8Q9HCE9 1232 aaPredicted RBP16.51■□□□□ 0.23
COL13A1-209ENST00000484990 CPSF1Q10570 1443 aaKnown RBP16.51■□□□□ 0.23
COL13A1-209ENST00000484990 COL18A1P39060 1754 aa16.51■□□□□ 0.23
COL13A1-209ENST00000484990 LRRC37A3O60309 1634 aa16.5■□□□□ 0.23
COL13A1-209ENST00000484990 ZBTB7AO95365 584 aa16.49■□□□□ 0.23
COL13A1-209ENST00000484990 SLC15A2Q16348 729 aa16.49■□□□□ 0.23
COL13A1-209ENST00000484990 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
COL13A1-209ENST00000484990 CCDC7Q96M83 1385 aa16.49■□□□□ 0.23
COL13A1-209ENST00000484990 PIK3C2AO00443 1686 aa16.47■□□□□ 0.23
COL13A1-209ENST00000484990 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
COL13A1-209ENST00000484990 PDGFDQ9GZP0 370 aaPredicted RBP16.47■□□□□ 0.23
COL13A1-209ENST00000484990 KTN1Q86UP2 1357 aaKnown RBP16.47■□□□□ 0.23
COL13A1-209ENST00000484990 KAT6BQ8WYB5 2073 aa16.47■□□□□ 0.23
COL13A1-209ENST00000484990 RGPD5Q99666 1765 aa16.46■□□□□ 0.23
COL13A1-209ENST00000484990 TRPM1Q7Z4N2 1603 aa16.46■□□□□ 0.23
COL13A1-209ENST00000484990 ROCK2O75116 1388 aaKnown RBP16.46■□□□□ 0.23
COL13A1-209ENST00000484990 PTGER2P43116 358 aa16.45■□□□□ 0.22
COL13A1-209ENST00000484990 MTFR1LQ9H019 292 aa16.45■□□□□ 0.22
COL13A1-209ENST00000484990 SYT17Q9BSW7 474 aa16.44■□□□□ 0.22
COL13A1-209ENST00000484990 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
COL13A1-209ENST00000484990 WNK3Q9BYP7 1800 aa16.44■□□□□ 0.22
COL13A1-209ENST00000484990 CASZ1Q86V15 1759 aa16.43■□□□□ 0.22
COL13A1-209ENST00000484990 NEUROD1Q13562 356 aa16.43■□□□□ 0.22
COL13A1-209ENST00000484990 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.43■□□□□ 0.22
COL13A1-209ENST00000484990 SIN3AQ96ST3 1273 aa16.43■□□□□ 0.22
COL13A1-209ENST00000484990 IL2RBP14784 551 aa16.42■□□□□ 0.22
COL13A1-209ENST00000484990 ACSBG1Q96GR2 724 aa16.42■□□□□ 0.22
COL13A1-209ENST00000484990 FHDC1Q9C0D6 1143 aaPredicted RBP16.42■□□□□ 0.22
COL13A1-209ENST00000484990 HDGFL2Q7Z4V5 671 aaPredicted RBP16.41■□□□□ 0.22
COL13A1-209ENST00000484990 ERBB3P21860 1342 aa16.4■□□□□ 0.22
COL13A1-209ENST00000484990 ABCC6O95255 1503 aa16.4■□□□□ 0.22
COL13A1-209ENST00000484990 USP31Q70CQ4 1352 aa16.39■□□□□ 0.21
COL13A1-209ENST00000484990 TNS2Q63HR2 1409 aa16.39■□□□□ 0.21
COL13A1-209ENST00000484990 TMC1Q8TDI8 760 aa16.39■□□□□ 0.21
COL13A1-209ENST00000484990 ARXQ96QS3 562 aa16.39■□□□□ 0.21
COL13A1-209ENST00000484990 NFAT5O94916 1531 aa16.39■□□□□ 0.21
COL13A1-209ENST00000484990 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
COL13A1-209ENST00000484990 ANKRD24Q8TF21 1146 aa16.38■□□□□ 0.21
COL13A1-209ENST00000484990 NME9Q86XW9 330 aa16.37■□□□□ 0.21
COL13A1-209ENST00000484990 SGIP1Q9BQI5 828 aa16.37■□□□□ 0.21
COL13A1-209ENST00000484990 SLC16A10Q8TF71 515 aa16.36■□□□□ 0.21
COL13A1-209ENST00000484990 CARD11Q9BXL7 1154 aa16.36■□□□□ 0.21
COL13A1-209ENST00000484990 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
COL13A1-209ENST00000484990 MYOM1P52179 1685 aa16.36■□□□□ 0.21
COL13A1-209ENST00000484990 SBNO2Q9Y2G9 1366 aa16.36■□□□□ 0.21
COL13A1-209ENST00000484990 CHD4Q14839 1912 aa16.35■□□□□ 0.21
COL13A1-209ENST00000484990 NHSQ6T4R5 1651 aa16.34■□□□□ 0.21
COL13A1-209ENST00000484990 SLC27A3Q5K4L6 730 aa16.34■□□□□ 0.21
COL13A1-209ENST00000484990 SLC12A5Q9H2X9 1139 aa16.34■□□□□ 0.21
COL13A1-209ENST00000484990 DDX54Q8TDD1 881 aaKnown RBP16.33■□□□□ 0.2
COL13A1-209ENST00000484990 IP6K1Q92551 441 aa16.33■□□□□ 0.2
COL13A1-209ENST00000484990 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
COL13A1-209ENST00000484990 MON2Q7Z3U7 1717 aa16.33■□□□□ 0.2
COL13A1-209ENST00000484990 POLD1P28340 1107 aa16.32■□□□□ 0.2
COL13A1-209ENST00000484990 GPR162Q16538 588 aa16.32■□□□□ 0.2
COL13A1-209ENST00000484990 LRRC4BQ9NT99 713 aa16.32■□□□□ 0.2
COL13A1-209ENST00000484990 EDC4Q6P2E9 1401 aaKnown RBP16.31■□□□□ 0.2
COL13A1-209ENST00000484990 MAP3K5Q99683 1374 aa16.31■□□□□ 0.2
COL13A1-209ENST00000484990 ZNF827Q17R98 1081 aa16.31■□□□□ 0.2
COL13A1-209ENST00000484990 LTN1O94822 1766 aa16.31■□□□□ 0.2
COL13A1-209ENST00000484990 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
COL13A1-209ENST00000484990 AKT1S1Q96B36 256 aa16.3■□□□□ 0.2
COL13A1-209ENST00000484990 BTAF1O14981 1849 aa16.3■□□□□ 0.2
COL13A1-209ENST00000484990 SYTL4Q96C24 671 aaPredicted RBP16.29■□□□□ 0.2
COL13A1-209ENST00000484990 LTV1Q96GA3 475 aaPredicted RBP16.29■□□□□ 0.2
COL13A1-209ENST00000484990 TFCP2L1Q9NZI6 479 aa16.29■□□□□ 0.2
COL13A1-209ENST00000484990 USP54Q70EL1 1684 aa16.29■□□□□ 0.2
COL13A1-209ENST00000484990 CD163L1Q9NR16 1453 aa16.29■□□□□ 0.2
COL13A1-209ENST00000484990 KLHL34Q8N239 644 aa16.28■□□□□ 0.2
COL13A1-209ENST00000484990 COG3Q96JB2 828 aa16.28■□□□□ 0.2
COL13A1-209ENST00000484990 AMPHP49418 695 aa16.27■□□□□ 0.2
COL13A1-209ENST00000484990 PRIM1P49642 420 aaKnown RBP16.27■□□□□ 0.2
COL13A1-209ENST00000484990 C1QTNF8P60827 252 aa16.27■□□□□ 0.2
COL13A1-209ENST00000484990 HMGB2P26583 209 aaKnown RBP16.26■□□□□ 0.19
COL13A1-209ENST00000484990 ZCRB1Q8TBF4 217 aaKnown RBP16.26■□□□□ 0.19
COL13A1-209ENST00000484990 PAPPAQ13219 1627 aa16.26■□□□□ 0.19
COL13A1-209ENST00000484990 UTRNP46939 3433 aa16.26■□□□□ 0.19
COL13A1-209ENST00000484990 A0A1W2PP64 1363 aa16.26■□□□□ 0.19
COL13A1-209ENST00000484990 SENP3-EIF4A1A0A087X0R7 540 aa16.25■□□□□ 0.19
COL13A1-209ENST00000484990 PNPLA7Q6ZV29 1317 aa16.24■□□□□ 0.19
COL13A1-209ENST00000484990 PELP1Q8IZL8 1130 aaKnown RBP16.24■□□□□ 0.19
COL13A1-209ENST00000484990 HOXC9P31274 260 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms