RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 MRPL14Q6P1L8 145 aaKnown RBP13.65□□□□□ -0.22
UBR3-210ENST00000484596 SLC10A4Q96EP9 437 aa13.65□□□□□ -0.22
UBR3-210ENST00000484596 ZFP42Q96MM3 310 aa13.65□□□□□ -0.22
UBR3-210ENST00000484596 GJD4Q96KN9 370 aaPredicted RBP13.64□□□□□ -0.23
UBR3-210ENST00000484596 CCDC116Q8IYX3 515 aa13.63□□□□□ -0.23
UBR3-210ENST00000484596 KCTD15Q96SI1 283 aaPredicted RBP13.63□□□□□ -0.23
UBR3-210ENST00000484596 BANK1Q8NDB2 785 aa13.62□□□□□ -0.23
UBR3-210ENST00000484596 PURBQ96QR8 312 aaKnown RBP13.62□□□□□ -0.23
UBR3-210ENST00000484596 SCARF1Q14162 830 aa13.61□□□□□ -0.23
UBR3-210ENST00000484596 TREML4Q6UXN2 200 aa13.61□□□□□ -0.23
UBR3-210ENST00000484596 CDV3Q9UKY7 258 aaKnown RBP13.61□□□□□ -0.23
UBR3-210ENST00000484596 EMILIN1Q9Y6C2 1016 aa13.61□□□□□ -0.23
UBR3-210ENST00000484596 PPP1R26Q5T8A7 1209 aaPredicted RBP13.58□□□□□ -0.24
UBR3-210ENST00000484596 LCE2AQ5TA79 106 aaPredicted RBP13.57□□□□□ -0.24
UBR3-210ENST00000484596 SNRKQ9NRH2 765 aa13.57□□□□□ -0.24
UBR3-210ENST00000484596 INTS6LQ5JSJ4 861 aaKnown RBP13.56□□□□□ -0.24
UBR3-210ENST00000484596 C6orf118Q5T5N4 469 aa13.56□□□□□ -0.24
UBR3-210ENST00000484596 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
UBR3-210ENST00000484596 MEIOBQ8N635 442 aa13.56□□□□□ -0.24
UBR3-210ENST00000484596 MTMR14Q8NCE2 650 aa13.56□□□□□ -0.24
UBR3-210ENST00000484596 NFX1Q12986 1120 aaKnown RBP13.54□□□□□ -0.24
UBR3-210ENST00000484596 PGPEP1Q9NXJ5 209 aa13.54□□□□□ -0.24
UBR3-210ENST00000484596 ZBBXA8MT70 800 aa13.53□□□□□ -0.24
UBR3-210ENST00000484596 TERTO14746 1132 aaKnown RBP13.53□□□□□ -0.24
UBR3-210ENST00000484596 WFS1O76024 890 aa13.53□□□□□ -0.24
UBR3-210ENST00000484596 DHX9Q08211 1270 aaKnown RBP13.53□□□□□ -0.24
UBR3-210ENST00000484596 NBPF20Q3BBV1 942 aa13.53□□□□□ -0.24
UBR3-210ENST00000484596 LINC00528Q8N1L1 170 aa13.53□□□□□ -0.24
UBR3-210ENST00000484596 UPP2O95045 317 aa13.52□□□□□ -0.25
UBR3-210ENST00000484596 FBXO45P0C2W1 286 aa13.52□□□□□ -0.25
UBR3-210ENST00000484596 CBLBQ13191 982 aa13.52□□□□□ -0.25
UBR3-210ENST00000484596 SOCS7O14512 581 aa13.51□□□□□ -0.25
UBR3-210ENST00000484596 BMP2P12643 396 aa13.51□□□□□ -0.25
UBR3-210ENST00000484596 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
UBR3-210ENST00000484596 RAB15P59190 212 aa13.5□□□□□ -0.25
UBR3-210ENST00000484596 Q6ZVU0 165 aa13.49□□□□□ -0.25
UBR3-210ENST00000484596 TSEN34Q9BSV6 310 aaKnown RBP13.49□□□□□ -0.25
UBR3-210ENST00000484596 GPR37L1O60883 481 aa13.48□□□□□ -0.25
UBR3-210ENST00000484596 TMPRSS4Q9NRS4 437 aa13.48□□□□□ -0.25
UBR3-210ENST00000484596 NXF1Q9UBU9 619 aaKnown RBP13.48□□□□□ -0.25
UBR3-210ENST00000484596 PCDHB9Q9Y5E1 797 aa13.48□□□□□ -0.25
UBR3-210ENST00000484596 NDUFB9Q9Y6M9 179 aa13.48□□□□□ -0.25
UBR3-210ENST00000484596 ESPNB1AK53 854 aa13.47□□□□□ -0.25
UBR3-210ENST00000484596 FLIIQ13045 1269 aa13.46□□□□□ -0.25
UBR3-210ENST00000484596 C14orf37Q86TY3 774 aa13.46□□□□□ -0.25
UBR3-210ENST00000484596 ERVH48-1M5A8F1 160 aa13.45□□□□□ -0.26
UBR3-210ENST00000484596 APBB1O00213 710 aa13.45□□□□□ -0.26
UBR3-210ENST00000484596 LCE2CQ5TA81 110 aa13.45□□□□□ -0.26
UBR3-210ENST00000484596 NR1H3Q13133 447 aa13.44□□□□□ -0.26
UBR3-210ENST00000484596 SOS2Q07890 1332 aaPredicted RBP13.43□□□□□ -0.26
UBR3-210ENST00000484596 MAN1A2O60476 641 aa13.43□□□□□ -0.26
UBR3-210ENST00000484596 VEGFBP49765 207 aa13.43□□□□□ -0.26
UBR3-210ENST00000484596 ZNF784Q8NCA9 323 aaPredicted RBP13.43□□□□□ -0.26
UBR3-210ENST00000484596 GIGYF1O75420 1035 aaPredicted RBP13.42□□□□□ -0.26
UBR3-210ENST00000484596 AGBL1Q96MI9 1066 aa13.42□□□□□ -0.26
UBR3-210ENST00000484596 TIMELESSQ9UNS1 1208 aa13.42□□□□□ -0.26
UBR3-210ENST00000484596 SEPT12Q8IYM1 358 aa13.41□□□□□ -0.26
UBR3-210ENST00000484596 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
UBR3-210ENST00000484596 LILRA1O75019 489 aa13.4□□□□□ -0.26
UBR3-210ENST00000484596 NPAS3Q8IXF0 933 aa13.4□□□□□ -0.26
UBR3-210ENST00000484596 DNMT3LQ9UJW3 386 aa13.4□□□□□ -0.26
UBR3-210ENST00000484596 SPINT1O43278 529 aa13.39□□□□□ -0.27
UBR3-210ENST00000484596 ADD1P35611 737 aaKnown RBP13.39□□□□□ -0.27
UBR3-210ENST00000484596 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
UBR3-210ENST00000484596 TTLL8A6PVC2 850 aa13.38□□□□□ -0.27
UBR3-210ENST00000484596 RELBQ01201 579 aa13.38□□□□□ -0.27
UBR3-210ENST00000484596 H3BM21 787 aa13.36□□□□□ -0.27
UBR3-210ENST00000484596 MCCD1P59942 119 aaPredicted RBP13.36□□□□□ -0.27
UBR3-210ENST00000484596 ZNF395Q9H8N7 513 aaPredicted RBP13.36□□□□□ -0.27
UBR3-210ENST00000484596 ZNF330Q9Y3S2 320 aaPredicted RBP13.36□□□□□ -0.27
UBR3-210ENST00000484596 FIGNL2A6NMB9 653 aa13.35□□□□□ -0.27
UBR3-210ENST00000484596 CYLDQ9NQC7 956 aa13.35□□□□□ -0.27
UBR3-210ENST00000484596 ADH1AP07327 375 aa13.34□□□□□ -0.27
UBR3-210ENST00000484596 INSM2Q96T92 566 aaPredicted RBP13.34□□□□□ -0.27
UBR3-210ENST00000484596 WIPF1O43516 503 aa13.33□□□□□ -0.28
UBR3-210ENST00000484596 CTSOP43234 321 aaPredicted RBP13.33□□□□□ -0.28
UBR3-210ENST00000484596 KDF1Q8NAX2 398 aaPredicted RBP13.33□□□□□ -0.28
UBR3-210ENST00000484596 IRF7Q92985 503 aa13.33□□□□□ -0.28
UBR3-210ENST00000484596 PRM3Q9NNZ6 103 aa13.33□□□□□ -0.28
UBR3-210ENST00000484596 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.32□□□□□ -0.28
UBR3-210ENST00000484596 RNF20Q5VTR2 975 aa13.32□□□□□ -0.28
UBR3-210ENST00000484596 ZNF592Q92610 1267 aa13.32□□□□□ -0.28
UBR3-210ENST00000484596 PTGIRP43119 386 aa13.31□□□□□ -0.28
UBR3-210ENST00000484596 IRF5Q13568 498 aa13.31□□□□□ -0.28
UBR3-210ENST00000484596 ERBB4Q15303 1308 aa13.31□□□□□ -0.28
UBR3-210ENST00000484596 CCDC125Q86Z20 511 aa13.3□□□□□ -0.28
UBR3-210ENST00000484596 POLMQ9NP87 494 aaPredicted RBP13.3□□□□□ -0.28
UBR3-210ENST00000484596 GMPRP36959 345 aa13.29□□□□□ -0.28
UBR3-210ENST00000484596 GDPD2Q9HCC8 539 aa13.29□□□□□ -0.28
UBR3-210ENST00000484596 PPFIA3O75145 1194 aa13.28□□□□□ -0.28
UBR3-210ENST00000484596 MCM6Q14566 821 aa13.28□□□□□ -0.28
UBR3-210ENST00000484596 TRIM52Q96A61 297 aa13.28□□□□□ -0.28
UBR3-210ENST00000484596 PTSQ03393 145 aa13.27□□□□□ -0.29
UBR3-210ENST00000484596 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.29
UBR3-210ENST00000484596 ERVK-9P63128 1117 aa13.26□□□□□ -0.29
UBR3-210ENST00000484596 ZMYND15Q9H091 742 aa13.26□□□□□ -0.29
UBR3-210ENST00000484596 PCDHB11Q9Y5F2 797 aa13.26□□□□□ -0.29
UBR3-210ENST00000484596 ABL2P42684 1182 aa13.25□□□□□ -0.29
UBR3-210ENST00000484596 CC2D2BQ6DHV5 1058 aa13.25□□□□□ -0.29
UBR3-210ENST00000484596 RNF217Q8TC41 542 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms