RNA–Protein interactions for RNA: ENST00000484556.1

DDR1-245, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 1,038 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-245ENST00000484556 SLC15A2Q16348 729 aa26.68■■□□□ 1.86
DDR1-245ENST00000484556 TXNRD1Q16881 649 aa26.67■■□□□ 1.86
DDR1-245ENST00000484556 GCP02774 474 aa26.65■■□□□ 1.86
DDR1-245ENST00000484556 MARCH10Q8NA82 808 aaPredicted RBP26.64■■□□□ 1.86
DDR1-245ENST00000484556 ARXQ96QS3 562 aa26.64■■□□□ 1.86
DDR1-245ENST00000484556 CDK19Q9BWU1 502 aa26.63■■□□□ 1.85
DDR1-245ENST00000484556 SHANK3Q9BYB0 1731 aa26.62■■□□□ 1.85
DDR1-245ENST00000484556 GPR162Q16538 588 aa26.61■■□□□ 1.85
DDR1-245ENST00000484556 TOM1L2Q6ZVM7 507 aa26.61■■□□□ 1.85
DDR1-245ENST00000484556 KDM2AQ9Y2K7 1162 aa26.61■■□□□ 1.85
DDR1-245ENST00000484556 NLRP13Q86W25 1043 aa26.6■■□□□ 1.85
DDR1-245ENST00000484556 MAP3K5Q99683 1374 aa26.59■■□□□ 1.85
DDR1-245ENST00000484556 BCL9O00512 1426 aa26.58■■□□□ 1.85
DDR1-245ENST00000484556 CCDC61Q9Y6R9 512 aa26.57■■□□□ 1.84
DDR1-245ENST00000484556 PAPPAQ13219 1627 aa26.57■■□□□ 1.84
DDR1-245ENST00000484556 COL18A1P39060 1754 aa26.56■■□□□ 1.84
DDR1-245ENST00000484556 GOLGB1Q14789 3259 aaKnown RBP26.56■■□□□ 1.84
DDR1-245ENST00000484556 PLEKHG3A1L390 1219 aa26.56■■□□□ 1.84
DDR1-245ENST00000484556 AATKQ6ZMQ8 1374 aa26.56■■□□□ 1.84
DDR1-245ENST00000484556 PELP1Q8IZL8 1130 aaKnown RBP26.55■■□□□ 1.84
DDR1-245ENST00000484556 KLHL34Q8N239 644 aa26.55■■□□□ 1.84
DDR1-245ENST00000484556 SLIT3O75094 1523 aa26.53■■□□□ 1.84
DDR1-245ENST00000484556 NHSQ6T4R5 1651 aa26.53■■□□□ 1.84
DDR1-245ENST00000484556 DCAF11Q8TEB1 546 aa26.52■■□□□ 1.84
DDR1-245ENST00000484556 RGPD5Q99666 1765 aa26.52■■□□□ 1.84
DDR1-245ENST00000484556 WDR17Q8IZU2 1322 aa26.51■■□□□ 1.83
DDR1-245ENST00000484556 PPIP5K1Q6PFW1 1433 aa26.49■■□□□ 1.83
DDR1-245ENST00000484556 AXIN2Q9Y2T1 843 aa26.49■■□□□ 1.83
DDR1-245ENST00000484556 ZNF827Q17R98 1081 aa26.48■■□□□ 1.83
DDR1-245ENST00000484556 CDCA7Q9BWT1 371 aaPredicted RBP26.48■■□□□ 1.83
DDR1-245ENST00000484556 NLRP6P59044 892 aa26.46■■□□□ 1.83
DDR1-245ENST00000484556 ACSBG1Q96GR2 724 aa26.46■■□□□ 1.83
DDR1-245ENST00000484556 PIK3C2AO00443 1686 aa26.45■■□□□ 1.82
DDR1-245ENST00000484556 BTAF1O14981 1849 aa26.44■■□□□ 1.82
DDR1-245ENST00000484556 CPSF1Q10570 1443 aaKnown RBP26.44■■□□□ 1.82
DDR1-245ENST00000484556 TNS2Q63HR2 1409 aa26.43■■□□□ 1.82
DDR1-245ENST00000484556 EXOC5O00471 708 aa26.42■■□□□ 1.82
DDR1-245ENST00000484556 CSB-PGBD3P0DP91 1061 aa26.42■■□□□ 1.82
DDR1-245ENST00000484556 NLGN2Q8NFZ4 835 aa26.42■■□□□ 1.82
DDR1-245ENST00000484556 SRPK2P78362 688 aaKnown RBP26.41■■□□□ 1.82
DDR1-245ENST00000484556 USP6P35125 1406 aa26.4■■□□□ 1.82
DDR1-245ENST00000484556 COL24A1Q17RW2 1714 aa26.4■■□□□ 1.82
DDR1-245ENST00000484556 CARD10Q9BWT7 1032 aa26.4■■□□□ 1.82
DDR1-245ENST00000484556 TRPM1Q7Z4N2 1603 aa26.39■■□□□ 1.82
DDR1-245ENST00000484556 QSER1Q2KHR3 1735 aa26.39■■□□□ 1.81
DDR1-245ENST00000484556 BRD4O60885 1362 aaPredicted RBP26.38■■□□□ 1.81
DDR1-245ENST00000484556 TUBGCP6Q96RT7 1819 aa26.38■■□□□ 1.81
DDR1-245ENST00000484556 CABP2Q9NPB3 220 aa26.38■■□□□ 1.81
DDR1-245ENST00000484556 ATP10DQ9P241 1426 aa26.38■■□□□ 1.81
DDR1-245ENST00000484556 SOX12O15370 315 aa26.37■■□□□ 1.81
DDR1-245ENST00000484556 POLD1P28340 1107 aa26.37■■□□□ 1.81
DDR1-245ENST00000484556 LRRC4BQ9NT99 713 aa26.37■■□□□ 1.81
DDR1-245ENST00000484556 QRICH2Q9H0J4 1663 aa26.37■■□□□ 1.81
DDR1-245ENST00000484556 ABCC6O95255 1503 aa26.36■■□□□ 1.81
DDR1-245ENST00000484556 YBX3P16989 372 aaKnown RBP eCLIP26.36■■□□□ 1.81
DDR1-245ENST00000484556 ARHGEF25Q86VW2 580 aa26.33■■□□□ 1.81
DDR1-245ENST00000484556 KAT6BQ8WYB5 2073 aa26.33■■□□□ 1.81
DDR1-245ENST00000484556 CCDC7Q96M83 1385 aa26.33■■□□□ 1.8
DDR1-245ENST00000484556 AKT1S1Q96B36 256 aa26.32■■□□□ 1.8
DDR1-245ENST00000484556 CABP1Q9NZU7 370 aa26.32■■□□□ 1.8
DDR1-245ENST00000484556 PNPLA7Q6ZV29 1317 aa26.32■■□□□ 1.8
DDR1-245ENST00000484556 HSPA6P17066 643 aa26.31■■□□□ 1.8
DDR1-245ENST00000484556 SLC16A10Q8TF71 515 aa26.31■■□□□ 1.8
DDR1-245ENST00000484556 STAC3Q96MF2 364 aa26.3■■□□□ 1.8
DDR1-245ENST00000484556 KIAA1210Q9ULL0 1709 aa26.28■■□□□ 1.8
DDR1-245ENST00000484556 GRIN3BO60391 1043 aa26.28■■□□□ 1.8
DDR1-245ENST00000484556 GPBP1L1Q9HC44 474 aaPredicted RBP26.27■■□□□ 1.8
DDR1-245ENST00000484556 NFAT5O94916 1531 aa26.27■■□□□ 1.8
DDR1-245ENST00000484556 ZNF526Q8TF50 670 aaPredicted RBP26.26■■□□□ 1.79
DDR1-245ENST00000484556 KCNH5Q8NCM2 988 aa26.24■■□□□ 1.79
DDR1-245ENST00000484556 RAB3GAP2Q9H2M9 1393 aa26.23■■□□□ 1.79
DDR1-245ENST00000484556 CENPJQ9HC77 1338 aaPredicted RBP26.23■■□□□ 1.79
DDR1-245ENST00000484556 KCNQ4P56696 695 aa26.23■■□□□ 1.79
DDR1-245ENST00000484556 NBPF1Q3BBV0 1214 aa26.23■■□□□ 1.79
DDR1-245ENST00000484556 TFCP2L1Q9NZI6 479 aa26.22■■□□□ 1.79
DDR1-245ENST00000484556 TTC21BQ7Z4L5 1316 aa26.2■■□□□ 1.79
DDR1-245ENST00000484556 ADCY9O60503 1353 aa26.2■■□□□ 1.78
DDR1-245ENST00000484556 IL2RBP14784 551 aa26.19■■□□□ 1.78
DDR1-245ENST00000484556 NLRP2Q9NX02 1062 aa26.19■■□□□ 1.78
DDR1-245ENST00000484556 SLC27A3Q5K4L6 730 aa26.18■■□□□ 1.78
DDR1-245ENST00000484556 ERBB3P21860 1342 aa26.15■■□□□ 1.78
DDR1-245ENST00000484556 LY75O60449 1722 aa26.15■■□□□ 1.78
DDR1-245ENST00000484556 LTN1O94822 1766 aa26.15■■□□□ 1.78
DDR1-245ENST00000484556 MSH5O43196 834 aa26.14■■□□□ 1.78
DDR1-245ENST00000484556 MSL1Q68DK7 614 aa26.14■■□□□ 1.78
DDR1-245ENST00000484556 DOT1LQ8TEK3 1739 aa26.14■■□□□ 1.77
DDR1-245ENST00000484556 TTC21AQ8NDW8 1320 aa26.11■■□□□ 1.77
DDR1-245ENST00000484556 SYTL4Q96C24 671 aaPredicted RBP26.1■■□□□ 1.77
DDR1-245ENST00000484556 COL23A1Q86Y22 540 aaPredicted RBP26.09■■□□□ 1.77
DDR1-245ENST00000484556 DDX54Q8TDD1 881 aaKnown RBP26.09■■□□□ 1.77
DDR1-245ENST00000484556 ANKRD24Q8TF21 1146 aa26.06■■□□□ 1.76
DDR1-245ENST00000484556 ZNF692Q9BU19 519 aaPredicted RBP26.06■■□□□ 1.76
DDR1-245ENST00000484556 WWC3Q9ULE0 1092 aa26.06■■□□□ 1.76
DDR1-245ENST00000484556 MON2Q7Z3U7 1717 aa26.05■■□□□ 1.76
DDR1-245ENST00000484556 KIF3CO14782 793 aa26.05■■□□□ 1.76
DDR1-245ENST00000484556 NSD2O96028 1365 aa26.05■■□□□ 1.76
DDR1-245ENST00000484556 PRIM1P49642 420 aaKnown RBP26.04■■□□□ 1.76
DDR1-245ENST00000484556 CCNL1Q9UK58 526 aaPredicted RBP26.04■■□□□ 1.76
DDR1-245ENST00000484556 EVC2Q86UK5 1308 aa26.04■■□□□ 1.76
DDR1-245ENST00000484556 KTN1Q86UP2 1357 aaKnown RBP26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms