RNA–Protein interactions for RNA: ENST00000484546.1

CDK5RAP2-217, Transcript of CDK5 regulatory subunit associated protein 2, humanhuman

TSL 1 (best)

Gene CDK5RAP2, Length 1,269 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2-217ENST00000484546 ONECUT3O60422 494 aaPredicted RBP16.16■□□□□ 0.18
CDK5RAP2-217ENST00000484546 FAM98CQ17RN3 349 aaKnown RBP16.16■□□□□ 0.18
CDK5RAP2-217ENST00000484546 SEPT12Q8IYM1 358 aa16.16■□□□□ 0.18
CDK5RAP2-217ENST00000484546 A0A0G2JS52 829 aa16.15■□□□□ 0.18
CDK5RAP2-217ENST00000484546 ZEB1P37275 1124 aaPredicted RBP16.15■□□□□ 0.18
CDK5RAP2-217ENST00000484546 MYT1Q01538 1121 aa16.15■□□□□ 0.18
CDK5RAP2-217ENST00000484546 LARP1Q6PKG0 1096 aaKnown RBP16.15■□□□□ 0.18
CDK5RAP2-217ENST00000484546 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
CDK5RAP2-217ENST00000484546 AXIN2Q9Y2T1 843 aa16.14■□□□□ 0.17
CDK5RAP2-217ENST00000484546 CGNL1Q0VF96 1302 aa16.14■□□□□ 0.17
CDK5RAP2-217ENST00000484546 KIF7Q2M1P5 1343 aa16.14■□□□□ 0.17
CDK5RAP2-217ENST00000484546 CRB1P82279 1406 aa16.13■□□□□ 0.17
CDK5RAP2-217ENST00000484546 WNK3Q9BYP7 1800 aa16.13■□□□□ 0.17
CDK5RAP2-217ENST00000484546 C11orf95C9JLR9 678 aaPredicted RBP16.13■□□□□ 0.17
CDK5RAP2-217ENST00000484546 UPF1Q92900 1129 aaKnown RBP eCLIP16.13■□□□□ 0.17
CDK5RAP2-217ENST00000484546 FYB1O15117 783 aa16.12■□□□□ 0.17
CDK5RAP2-217ENST00000484546 GGNBP2Q9H3C7 697 aa16.12■□□□□ 0.17
CDK5RAP2-217ENST00000484546 PANK3Q9H999 370 aa16.12■□□□□ 0.17
CDK5RAP2-217ENST00000484546 CSB-PGBD3P0DP91 1061 aa16.11■□□□□ 0.17
CDK5RAP2-217ENST00000484546 USP35Q9P2H5 1018 aa16.11■□□□□ 0.17
CDK5RAP2-217ENST00000484546 WDR17Q8IZU2 1322 aa16.11■□□□□ 0.17
CDK5RAP2-217ENST00000484546 BARGINQ6ZT62 677 aa16.1■□□□□ 0.17
CDK5RAP2-217ENST00000484546 TCP11L2Q8N4U5 519 aa16.1■□□□□ 0.17
CDK5RAP2-217ENST00000484546 PARP4Q9UKK3 1724 aaKnown RBP16.1■□□□□ 0.17
CDK5RAP2-217ENST00000484546 ANKRD26Q9UPS8 1709 aa16.1■□□□□ 0.17
CDK5RAP2-217ENST00000484546 KRT27Q7Z3Y8 459 aa16.09■□□□□ 0.17
CDK5RAP2-217ENST00000484546 KNSTRNQ9Y448 316 aa16.09■□□□□ 0.17
CDK5RAP2-217ENST00000484546 BLMP54132 1417 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP2-217ENST00000484546 LRRC37A3O60309 1634 aa16.08■□□□□ 0.17
CDK5RAP2-217ENST00000484546 AMPHP49418 695 aa16.08■□□□□ 0.16
CDK5RAP2-217ENST00000484546 TOM1L2Q6ZVM7 507 aa16.08■□□□□ 0.16
CDK5RAP2-217ENST00000484546 THRAP3Q9Y2W1 955 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP2-217ENST00000484546 ERBB3P21860 1342 aa16.08■□□□□ 0.16
CDK5RAP2-217ENST00000484546 MAP3K19Q56UN5 1328 aa16.08■□□□□ 0.16
CDK5RAP2-217ENST00000484546 CCDC7Q96M83 1385 aa16.08■□□□□ 0.16
CDK5RAP2-217ENST00000484546 EP400Q96L91 3159 aa16.07■□□□□ 0.16
CDK5RAP2-217ENST00000484546 RTL1A6NKG5 1358 aa16.07■□□□□ 0.16
CDK5RAP2-217ENST00000484546 FAM208AQ9UK61 1670 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP2-217ENST00000484546 PEAK1Q9H792 1746 aa16.06■□□□□ 0.16
CDK5RAP2-217ENST00000484546 FBLN1P23142 703 aa16.06■□□□□ 0.16
CDK5RAP2-217ENST00000484546 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
CDK5RAP2-217ENST00000484546 IP6K1Q92551 441 aa16.05■□□□□ 0.16
CDK5RAP2-217ENST00000484546 DISP2A7MBM2 1401 aa16.04■□□□□ 0.16
CDK5RAP2-217ENST00000484546 NSD2O96028 1365 aa16.04■□□□□ 0.16
CDK5RAP2-217ENST00000484546 RRS1Q15050 365 aaKnown RBP16.04■□□□□ 0.16
CDK5RAP2-217ENST00000484546 ANKRD24Q8TF21 1146 aa16.04■□□□□ 0.16
CDK5RAP2-217ENST00000484546 CARD10Q9BWT7 1032 aa16.04■□□□□ 0.16
CDK5RAP2-217ENST00000484546 HOXC9P31274 260 aa16.03■□□□□ 0.16
CDK5RAP2-217ENST00000484546 PPM1GO15355 546 aaPredicted RBP16.02■□□□□ 0.16
CDK5RAP2-217ENST00000484546 SMG6Q86US8 1419 aaKnown RBP16.02■□□□□ 0.15
CDK5RAP2-217ENST00000484546 TNNT2P45379 298 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP2-217ENST00000484546 MORC1Q86VD1 984 aa16.01■□□□□ 0.15
CDK5RAP2-217ENST00000484546 LTV1Q96GA3 475 aaPredicted RBP16.01■□□□□ 0.15
CDK5RAP2-217ENST00000484546 NLRP2Q9NX02 1062 aa16.01■□□□□ 0.15
CDK5RAP2-217ENST00000484546 RGPD1P0DJD0 1748 aa16.01■□□□□ 0.15
CDK5RAP2-217ENST00000484546 FLT4P35916 1363 aa16■□□□□ 0.15
CDK5RAP2-217ENST00000484546 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
CDK5RAP2-217ENST00000484546 RGPD2P0DJD1 1756 aa16■□□□□ 0.15
CDK5RAP2-217ENST00000484546 TNS1Q9HBL0 1735 aaKnown RBP16■□□□□ 0.15
CDK5RAP2-217ENST00000484546 FAM182BQ5T319 152 aa16■□□□□ 0.15
CDK5RAP2-217ENST00000484546 PDE3BQ13370 1112 aa15.99■□□□□ 0.15
CDK5RAP2-217ENST00000484546 CCDC125Q86Z20 511 aa15.99■□□□□ 0.15
CDK5RAP2-217ENST00000484546 CDCA7Q9BWT1 371 aaPredicted RBP15.99■□□□□ 0.15
CDK5RAP2-217ENST00000484546 TNS2Q63HR2 1409 aa15.99■□□□□ 0.15
CDK5RAP2-217ENST00000484546 MAP2P11137 1827 aaKnown RBP15.98■□□□□ 0.15
CDK5RAP2-217ENST00000484546 EMILIN1Q9Y6C2 1016 aa15.98■□□□□ 0.15
CDK5RAP2-217ENST00000484546 INSRP06213 1382 aa15.98■□□□□ 0.15
CDK5RAP2-217ENST00000484546 CNGB1Q14028 1251 aaPredicted RBP15.97■□□□□ 0.15
CDK5RAP2-217ENST00000484546 DDB1Q16531 1140 aa15.97■□□□□ 0.15
CDK5RAP2-217ENST00000484546 OVOS2A0A0G2JMS6 1433 aa15.96■□□□□ 0.15
CDK5RAP2-217ENST00000484546 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.15
CDK5RAP2-217ENST00000484546 FAM196AQ6ZSG2 479 aa15.96■□□□□ 0.15
CDK5RAP2-217ENST00000484546 HSP90AB2PQ58FF8 381 aa15.95■□□□□ 0.14
CDK5RAP2-217ENST00000484546 IL2RBP14784 551 aa15.94■□□□□ 0.14
CDK5RAP2-217ENST00000484546 AMER1Q5JTC6 1135 aaPredicted RBP15.94■□□□□ 0.14
CDK5RAP2-217ENST00000484546 SF3B2Q13435 895 aaKnown RBP15.93■□□□□ 0.14
CDK5RAP2-217ENST00000484546 POLKQ9UBT6 870 aa15.93■□□□□ 0.14
CDK5RAP2-217ENST00000484546 SBF2Q86WG5 1849 aa15.93■□□□□ 0.14
CDK5RAP2-217ENST00000484546 MEGF6O75095 1541 aa15.93■□□□□ 0.14
CDK5RAP2-217ENST00000484546 SHANK3Q9BYB0 1731 aa15.92■□□□□ 0.14
CDK5RAP2-217ENST00000484546 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
CDK5RAP2-217ENST00000484546 MARCH10Q8NA82 808 aaPredicted RBP15.92■□□□□ 0.14
CDK5RAP2-217ENST00000484546 BCL9O00512 1426 aa15.92■□□□□ 0.14
CDK5RAP2-217ENST00000484546 EXOC5O00471 708 aa15.91■□□□□ 0.14
CDK5RAP2-217ENST00000484546 PER1O15534 1290 aaPredicted RBP15.91■□□□□ 0.14
CDK5RAP2-217ENST00000484546 TRIM37O94972 964 aa15.91■□□□□ 0.14
CDK5RAP2-217ENST00000484546 NBPF6Q5VWK0 638 aa15.91■□□□□ 0.14
CDK5RAP2-217ENST00000484546 NBPF4Q96M43 638 aa15.91■□□□□ 0.14
CDK5RAP2-217ENST00000484546 NCAPD2Q15021 1401 aa15.91■□□□□ 0.14
CDK5RAP2-217ENST00000484546 USHBP1Q8N6Y0 703 aa15.9■□□□□ 0.14
CDK5RAP2-217ENST00000484546 NPC1L1Q9UHC9 1359 aa15.89■□□□□ 0.13
CDK5RAP2-217ENST00000484546 BAG6P46379 1132 aa15.89■□□□□ 0.13
CDK5RAP2-217ENST00000484546 RAPGEF4Q8WZA2 1011 aa15.88■□□□□ 0.13
CDK5RAP2-217ENST00000484546 NHSQ6T4R5 1651 aa15.88■□□□□ 0.13
CDK5RAP2-217ENST00000484546 RREB1Q92766 1687 aa15.86■□□□□ 0.13
CDK5RAP2-217ENST00000484546 PKD1L3Q7Z443 1732 aa15.86■□□□□ 0.13
CDK5RAP2-217ENST00000484546 RGPD3A6NKT7 1758 aaPredicted RBP15.86■□□□□ 0.13
CDK5RAP2-217ENST00000484546 RGPD4Q7Z3J3 1758 aa15.86■□□□□ 0.13
CDK5RAP2-217ENST00000484546 TATP17735 454 aaPredicted RBP15.85■□□□□ 0.13
CDK5RAP2-217ENST00000484546 EN1Q05925 392 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms