RNA–Protein interactions for RNA: ENST00000484268.1

ABCA13-206, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 3,340 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-206ENST00000484268 MAGI1Q96QZ7 1491 aaPredicted RBP8.56□□□□□ -1.04
ABCA13-206ENST00000484268 CTIFO43310 598 aaKnown RBP8.55□□□□□ -1.04
ABCA13-206ENST00000484268 SLFN14P0C7P3 912 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 ATF7IPQ6VMQ6 1270 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 DNAJC2Q99543 621 aaKnown RBP8.55□□□□□ -1.04
ABCA13-206ENST00000484268 DIAPH3Q9NSV4 1193 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 TROQ12816 1431 aaPredicted RBP8.55□□□□□ -1.04
ABCA13-206ENST00000484268 DTNBO60941 627 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 MBD3O95983 291 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 ATXN8OSP0DMR3 200 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 MTHFSP49914 203 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 RIOK3O14730 519 aaKnown RBP8.55□□□□□ -1.04
ABCA13-206ENST00000484268 RABEP1Q15276 862 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 TRERF1Q96PN7 1200 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 ZBTB40Q9NUA8 1239 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 PLB1Q6P1J6 1458 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 SHANK2Q9UPX8 1470 aa8.55□□□□□ -1.04
ABCA13-206ENST00000484268 CCDC66A2RUB6 948 aa8.54□□□□□ -1.04
ABCA13-206ENST00000484268 CFAP74Q9C0B2 1584 aa8.54□□□□□ -1.04
ABCA13-206ENST00000484268 IQSEC2Q5JU85 1478 aa8.54□□□□□ -1.04
ABCA13-206ENST00000484268 POLR3AO14802 1390 aaPredicted RBP8.54□□□□□ -1.04
ABCA13-206ENST00000484268 NAA30Q147X3 362 aaPredicted RBP8.54□□□□□ -1.04
ABCA13-206ENST00000484268 C16orf71Q8IYS4 520 aaPredicted RBP8.54□□□□□ -1.04
ABCA13-206ENST00000484268 RNF17Q9BXT8 1623 aaKnown RBP8.54□□□□□ -1.04
ABCA13-206ENST00000484268 SMARCA5O60264 1052 aaPredicted RBP8.54□□□□□ -1.04
ABCA13-206ENST00000484268 UVSSAQ2YD98 709 aa8.54□□□□□ -1.04
ABCA13-206ENST00000484268 ELL2O00472 640 aaPredicted RBP8.53□□□□□ -1.04
ABCA13-206ENST00000484268 U2SURPO15042 1029 aaKnown RBP8.53□□□□□ -1.04
ABCA13-206ENST00000484268 GADD45BO75293 160 aaPredicted RBP8.53□□□□□ -1.04
ABCA13-206ENST00000484268 CHAF1AQ13111 956 aaPredicted RBP8.53□□□□□ -1.04
ABCA13-206ENST00000484268 TIGD1Q96MW7 591 aa8.53□□□□□ -1.04
ABCA13-206ENST00000484268 ADAMTS12P58397 1594 aa8.53□□□□□ -1.04
ABCA13-206ENST00000484268 CHD1O14646 1710 aa8.53□□□□□ -1.04
ABCA13-206ENST00000484268 CCDC27Q2M243 656 aa8.53□□□□□ -1.04
ABCA13-206ENST00000484268 CTNNA3Q9UI47 895 aa8.53□□□□□ -1.04
ABCA13-206ENST00000484268 ATAD2Q6PL18 1390 aa8.53□□□□□ -1.04
ABCA13-206ENST00000484268 GSPT1P15170 499 aaKnown RBP8.52□□□□□ -1.04
ABCA13-206ENST00000484268 CERS3Q8IU89 383 aa8.52□□□□□ -1.04
ABCA13-206ENST00000484268 SPC24Q8NBT2 197 aa8.52□□□□□ -1.04
ABCA13-206ENST00000484268 OTUD7AQ8TE49 926 aaPredicted RBP8.52□□□□□ -1.04
ABCA13-206ENST00000484268 SLC12A5Q9H2X9 1139 aa8.52□□□□□ -1.04
ABCA13-206ENST00000484268 SYNJ2O15056 1496 aa8.52□□□□□ -1.05
ABCA13-206ENST00000484268 CT47B1P0C2W7 299 aaPredicted RBP8.52□□□□□ -1.05
ABCA13-206ENST00000484268 MYOM1P52179 1685 aa8.52□□□□□ -1.05
ABCA13-206ENST00000484268 ERICH4A6NGS2 130 aa8.52□□□□□ -1.05
ABCA13-206ENST00000484268 TULP2O00295 520 aa8.52□□□□□ -1.05
ABCA13-206ENST00000484268 ADCY5O95622 1261 aa8.52□□□□□ -1.05
ABCA13-206ENST00000484268 SYCP1Q15431 976 aa8.52□□□□□ -1.05
ABCA13-206ENST00000484268 FAM184AQ8NB25 1140 aa8.52□□□□□ -1.05
ABCA13-206ENST00000484268 DDX41Q9UJV9 622 aaKnown RBP8.52□□□□□ -1.05
ABCA13-206ENST00000484268 MYO5CQ9NQX4 1742 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 HCLS1P14317 486 aaPredicted RBP8.51□□□□□ -1.05
ABCA13-206ENST00000484268 NCBP1Q09161 790 aaKnown RBP8.51□□□□□ -1.05
ABCA13-206ENST00000484268 TERF2Q15554 542 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 CFAP70Q5T0N1 1121 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 PYCARDQ9ULZ3 195 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 MORC2Q9Y6X9 1032 aaPredicted RBP8.51□□□□□ -1.05
ABCA13-206ENST00000484268 PLEKHD1A6NEE1 506 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 CDC45O75419 566 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 KIAA1524Q8TCG1 905 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 SYAP1Q96A49 352 aaPredicted RBP8.51□□□□□ -1.05
ABCA13-206ENST00000484268 IRX3P78415 501 aaPredicted RBP8.51□□□□□ -1.05
ABCA13-206ENST00000484268 ZBTB9Q96C00 473 aa8.51□□□□□ -1.05
ABCA13-206ENST00000484268 CAPN2P17655 700 aa8.5□□□□□ -1.05
ABCA13-206ENST00000484268 SIRT2Q8IXJ6 389 aa8.5□□□□□ -1.05
ABCA13-206ENST00000484268 IQGAP1P46940 1657 aa8.5□□□□□ -1.05
ABCA13-206ENST00000484268 PHF14O94880 888 aa8.5□□□□□ -1.05
ABCA13-206ENST00000484268 FBLN2P98095 1184 aa8.5□□□□□ -1.05
ABCA13-206ENST00000484268 CALCOCO1Q9P1Z2 691 aa8.5□□□□□ -1.05
ABCA13-206ENST00000484268 RAPGEF6Q8TEU7 1601 aa8.5□□□□□ -1.05
ABCA13-206ENST00000484268 CDC42BPAQ5VT25 1732 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 SHPRHQ149N8 1683 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 TEX2Q8IWB9 1127 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 PPIP5K1Q6PFW1 1433 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 MYCNP04198 464 aaPredicted RBP8.49□□□□□ -1.05
ABCA13-206ENST00000484268 DISP1Q96F81 1524 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 ANKRD36BQ8N2N9 1353 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 CHRM1P11229 460 aaPredicted RBP8.49□□□□□ -1.05
ABCA13-206ENST00000484268 TMEM132AQ24JP5 1023 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 ZFP91Q96JP5 570 aaPredicted RBP8.49□□□□□ -1.05
ABCA13-206ENST00000484268 USP26Q9BXU7 913 aa8.49□□□□□ -1.05
ABCA13-206ENST00000484268 NSD3Q9BZ95 1437 aa8.48□□□□□ -1.05
ABCA13-206ENST00000484268 GCC1Q96CN9 775 aa8.48□□□□□ -1.05
ABCA13-206ENST00000484268 THUMPD2Q9BTF0 503 aaKnown RBP8.48□□□□□ -1.05
ABCA13-206ENST00000484268 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.48□□□□□ -1.05
ABCA13-206ENST00000484268 V9GYY5 206 aaPredicted RBP8.48□□□□□ -1.05
ABCA13-206ENST00000484268 NEK4P51957 841 aa8.48□□□□□ -1.05
ABCA13-206ENST00000484268 KIF18AQ8NI77 898 aa8.48□□□□□ -1.05
ABCA13-206ENST00000484268 TSPYL1Q9H0U9 437 aa8.48□□□□□ -1.05
ABCA13-206ENST00000484268 KCNF1Q9H3M0 494 aa8.48□□□□□ -1.05
ABCA13-206ENST00000484268 REREQ9P2R6 1566 aa8.48□□□□□ -1.05
ABCA13-206ENST00000484268 AP5Z1O43299 807 aa8.47□□□□□ -1.05
ABCA13-206ENST00000484268 ST18O60284 1047 aa8.47□□□□□ -1.05
ABCA13-206ENST00000484268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.47□□□□□ -1.05
ABCA13-206ENST00000484268 AEBP1Q8IUX7 1158 aa8.47□□□□□ -1.05
ABCA13-206ENST00000484268 RGS22Q8NE09 1264 aa8.47□□□□□ -1.05
ABCA13-206ENST00000484268 ST7Q9NRC1 585 aa8.47□□□□□ -1.05
ABCA13-206ENST00000484268 SCAF11Q99590 1463 aaKnown RBP8.47□□□□□ -1.05
ABCA13-206ENST00000484268 YEATS2Q9ULM3 1422 aa8.47□□□□□ -1.05
ABCA13-206ENST00000484268 TPM3P06753 285 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms