RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 GGNBP2Q9H3C7 697 aa36.77■■■■□ 3.48
SMDT1-203ENST00000484235 BRWD3Q6RI45 1802 aa36.75■■■■□ 3.47
SMDT1-203ENST00000484235 SPATA31A5Q5VU36 1347 aa36.75■■■■□ 3.47
SMDT1-203ENST00000484235 SPATA31A7Q8IWB4 1347 aa36.75■■■■□ 3.47
SMDT1-203ENST00000484235 LMO7Q8WWI1 1683 aa36.74■■■■□ 3.47
SMDT1-203ENST00000484235 AXIN2Q9Y2T1 843 aa36.73■■■■□ 3.47
SMDT1-203ENST00000484235 CGNL1Q0VF96 1302 aa36.72■■■■□ 3.47
SMDT1-203ENST00000484235 LARP1Q6PKG0 1096 aaKnown RBP36.7■■■■□ 3.47
SMDT1-203ENST00000484235 SPATA31A1Q5TZJ5 1347 aa36.69■■■■□ 3.46
SMDT1-203ENST00000484235 DEFB132Q7Z7B7 95 aa36.69■■■■□ 3.46
SMDT1-203ENST00000484235 COL5A2P05997 1499 aaPredicted RBP36.69■■■■□ 3.46
SMDT1-203ENST00000484235 COL18A1P39060 1754 aa36.66■■■■□ 3.46
SMDT1-203ENST00000484235 KRT27Q7Z3Y8 459 aa36.66■■■■□ 3.46
SMDT1-203ENST00000484235 CCDC7Q96M83 1385 aa36.66■■■■□ 3.46
SMDT1-203ENST00000484235 WASHC2AQ641Q2 1341 aa36.65■■■■□ 3.46
SMDT1-203ENST00000484235 FAM98CQ17RN3 349 aaKnown RBP36.65■■■■□ 3.46
SMDT1-203ENST00000484235 ZEB1P37275 1124 aaPredicted RBP36.64■■■■□ 3.46
SMDT1-203ENST00000484235 ABCC6O95255 1503 aa36.63■■■■□ 3.45
SMDT1-203ENST00000484235 FBLN1P23142 703 aa36.62■■■■□ 3.45
SMDT1-203ENST00000484235 USP35Q9P2H5 1018 aa36.62■■■■□ 3.45
SMDT1-203ENST00000484235 WDR17Q8IZU2 1322 aa36.6■■■■□ 3.45
SMDT1-203ENST00000484235 IP6K1Q92551 441 aa36.6■■■■□ 3.45
SMDT1-203ENST00000484235 KNSTRNQ9Y448 316 aa36.6■■■■□ 3.45
SMDT1-203ENST00000484235 MAP3K19Q56UN5 1328 aa36.59■■■■□ 3.45
SMDT1-203ENST00000484235 TOM1L2Q6ZVM7 507 aa36.59■■■■□ 3.45
SMDT1-203ENST00000484235 TCP11L2Q8N4U5 519 aa36.59■■■■□ 3.45
SMDT1-203ENST00000484235 THRAP3Q9Y2W1 955 aaKnown RBP36.59■■■■□ 3.45
SMDT1-203ENST00000484235 KIF20BQ96Q89 1820 aa36.59■■■■□ 3.45
SMDT1-203ENST00000484235 CRB1P82279 1406 aa36.59■■■■□ 3.45
SMDT1-203ENST00000484235 BARGINQ6ZT62 677 aa36.58■■■■□ 3.45
SMDT1-203ENST00000484235 A0A0G2JS52 829 aa36.57■■■■□ 3.44
SMDT1-203ENST00000484235 CSB-PGBD3P0DP91 1061 aa36.57■■■■□ 3.44
SMDT1-203ENST00000484235 MYT1Q01538 1121 aa36.57■■■■□ 3.44
SMDT1-203ENST00000484235 AMPHP49418 695 aa36.56■■■■□ 3.44
SMDT1-203ENST00000484235 RRS1Q15050 365 aaKnown RBP36.55■■■■□ 3.44
SMDT1-203ENST00000484235 SF3B2Q13435 895 aaKnown RBP36.54■■■■□ 3.44
SMDT1-203ENST00000484235 LTN1O94822 1766 aa36.53■■■■□ 3.44
SMDT1-203ENST00000484235 HOXC9P31274 260 aa36.52■■■■□ 3.44
SMDT1-203ENST00000484235 CARD10Q9BWT7 1032 aa36.52■■■■□ 3.44
SMDT1-203ENST00000484235 ERBB3P21860 1342 aa36.52■■■■□ 3.44
SMDT1-203ENST00000484235 NSD2O96028 1365 aa36.52■■■■□ 3.44
SMDT1-203ENST00000484235 ANKRD24Q8TF21 1146 aa36.51■■■■□ 3.44
SMDT1-203ENST00000484235 PER1O15534 1290 aaPredicted RBP36.5■■■■□ 3.43
SMDT1-203ENST00000484235 RGPD5Q99666 1765 aa36.48■■■■□ 3.43
SMDT1-203ENST00000484235 RTL1A6NKG5 1358 aa36.48■■■■□ 3.43
SMDT1-203ENST00000484235 KIF24Q5T7B8 1368 aa36.46■■■■□ 3.43
SMDT1-203ENST00000484235 AMER1Q5JTC6 1135 aaPredicted RBP36.46■■■■□ 3.43
SMDT1-203ENST00000484235 NLRP2Q9NX02 1062 aa36.45■■■■□ 3.43
SMDT1-203ENST00000484235 THSD7AQ9UPZ6 1657 aa36.43■■■■□ 3.42
SMDT1-203ENST00000484235 MORC1Q86VD1 984 aa36.43■■■■□ 3.42
SMDT1-203ENST00000484235 LTV1Q96GA3 475 aaPredicted RBP36.43■■■■□ 3.42
SMDT1-203ENST00000484235 TNNT2P45379 298 aaPredicted RBP36.42■■■■□ 3.42
SMDT1-203ENST00000484235 CDCA7Q9BWT1 371 aaPredicted RBP36.42■■■■□ 3.42
SMDT1-203ENST00000484235 BAG6P46379 1132 aa36.41■■■■□ 3.42
SMDT1-203ENST00000484235 FAM182BQ5T319 152 aa36.41■■■■□ 3.42
SMDT1-203ENST00000484235 EMILIN1Q9Y6C2 1016 aa36.41■■■■□ 3.42
SMDT1-203ENST00000484235 FLT4P35916 1363 aa36.4■■■■□ 3.42
SMDT1-203ENST00000484235 HSP90AB2PQ58FF8 381 aa36.39■■■■□ 3.42
SMDT1-203ENST00000484235 POLKQ9UBT6 870 aa36.39■■■■□ 3.42
SMDT1-203ENST00000484235 PPM1GO15355 546 aaPredicted RBP36.38■■■■□ 3.41
SMDT1-203ENST00000484235 INSRP06213 1382 aa36.38■■■■□ 3.41
SMDT1-203ENST00000484235 PDE3BQ13370 1112 aa36.37■■■■□ 3.41
SMDT1-203ENST00000484235 ANKRD26Q9UPS8 1709 aa36.36■■■■□ 3.41
SMDT1-203ENST00000484235 EN1Q05925 392 aaPredicted RBP36.33■■■■□ 3.41
SMDT1-203ENST00000484235 NPC1L1Q9UHC9 1359 aa36.31■■■■□ 3.4
SMDT1-203ENST00000484235 DDB1Q16531 1140 aa36.31■■■■□ 3.4
SMDT1-203ENST00000484235 SMG6Q86US8 1419 aaKnown RBP36.31■■■■□ 3.4
SMDT1-203ENST00000484235 PSDA5PKW4 1024 aaPredicted RBP36.3■■■■□ 3.4
SMDT1-203ENST00000484235 CC2D1BQ5T0F9 858 aaKnown RBP36.3■■■■□ 3.4
SMDT1-203ENST00000484235 DISP2A7MBM2 1401 aa36.3■■■■□ 3.4
SMDT1-203ENST00000484235 PEAK1Q9H792 1746 aa36.3■■■■□ 3.4
SMDT1-203ENST00000484235 IL2RBP14784 551 aa36.28■■■■□ 3.4
SMDT1-203ENST00000484235 EXOC5O00471 708 aa36.27■■■■□ 3.4
SMDT1-203ENST00000484235 NBPF6Q5VWK0 638 aa36.27■■■■□ 3.4
SMDT1-203ENST00000484235 NBPF4Q96M43 638 aa36.27■■■■□ 3.4
SMDT1-203ENST00000484235 LRP5O75197 1615 aa36.26■■■■□ 3.4
SMDT1-203ENST00000484235 PARP4Q9UKK3 1724 aaKnown RBP36.26■■■■□ 3.4
SMDT1-203ENST00000484235 FAM196AQ6ZSG2 479 aa36.26■■■■□ 3.4
SMDT1-203ENST00000484235 MAP2P11137 1827 aaKnown RBP36.26■■■■□ 3.39
SMDT1-203ENST00000484235 RGPD1P0DJD0 1748 aa36.25■■■■□ 3.39
SMDT1-203ENST00000484235 FAM208AQ9UK61 1670 aaKnown RBP36.25■■■■□ 3.39
SMDT1-203ENST00000484235 TNS1Q9HBL0 1735 aaKnown RBP36.2■■■■□ 3.39
SMDT1-203ENST00000484235 CAMKK2Q96RR4 588 aa36.2■■■■□ 3.39
SMDT1-203ENST00000484235 TRIM37O94972 964 aa36.19■■■■□ 3.38
SMDT1-203ENST00000484235 EZH2Q15910 746 aaKnown RBP36.19■■■■□ 3.38
SMDT1-203ENST00000484235 CNGB1Q14028 1251 aaPredicted RBP36.18■■■■□ 3.38
SMDT1-203ENST00000484235 MARCH10Q8NA82 808 aaPredicted RBP36.17■■■■□ 3.38
SMDT1-203ENST00000484235 WNK3Q9BYP7 1800 aa36.17■■■■□ 3.38
SMDT1-203ENST00000484235 LRRC37A3O60309 1634 aa36.16■■■■□ 3.38
SMDT1-203ENST00000484235 USHBP1Q8N6Y0 703 aa36.16■■■■□ 3.38
SMDT1-203ENST00000484235 EIF4A2Q14240 407 aaKnown RBP36.15■■■■□ 3.38
SMDT1-203ENST00000484235 R3HDM1Q15032 1099 aaKnown RBP36.14■■■■□ 3.38
SMDT1-203ENST00000484235 MTHFSP49914 203 aa36.13■■■■□ 3.37
SMDT1-203ENST00000484235 EYA1Q99502 592 aa36.13■■■■□ 3.37
SMDT1-203ENST00000484235 TNS2Q63HR2 1409 aa36.13■■■■□ 3.37
SMDT1-203ENST00000484235 RAPGEF4Q8WZA2 1011 aa36.12■■■■□ 3.37
SMDT1-203ENST00000484235 OVOS2A0A0G2JMS6 1433 aa36.11■■■■□ 3.37
SMDT1-203ENST00000484235 RGPD2P0DJD1 1756 aa36.11■■■■□ 3.37
SMDT1-203ENST00000484235 DDX10Q13206 875 aaKnown RBP36.09■■■■□ 3.37
SMDT1-203ENST00000484235 APBA3O96018 575 aa36.08■■■■□ 3.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms