RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 CABP2Q9NPB3 220 aa18.6■□□□□ 0.57
DNMT3A-213ENST00000484184 AXIN2Q9Y2T1 843 aa18.6■□□□□ 0.57
DNMT3A-213ENST00000484184 WNK3Q9BYP7 1800 aa18.59■□□□□ 0.57
DNMT3A-213ENST00000484184 DCAF8L1A6NGE4 600 aa18.58■□□□□ 0.56
DNMT3A-213ENST00000484184 NLRP6P59044 892 aa18.58■□□□□ 0.56
DNMT3A-213ENST00000484184 SRPK2P78362 688 aaKnown RBP18.58■□□□□ 0.56
DNMT3A-213ENST00000484184 MYOM1P52179 1685 aa18.57■□□□□ 0.56
DNMT3A-213ENST00000484184 WDR17Q8IZU2 1322 aa18.57■□□□□ 0.56
DNMT3A-213ENST00000484184 CABP1Q9NZU7 370 aa18.57■□□□□ 0.56
DNMT3A-213ENST00000484184 PIK3C2AO00443 1686 aa18.57■□□□□ 0.56
DNMT3A-213ENST00000484184 CENPJQ9HC77 1338 aaPredicted RBP18.56■□□□□ 0.56
DNMT3A-213ENST00000484184 ZBTB7CA1YPR0 619 aa18.56■□□□□ 0.56
DNMT3A-213ENST00000484184 ZBTB7AO95365 584 aa18.56■□□□□ 0.56
DNMT3A-213ENST00000484184 TOM1L2Q6ZVM7 507 aa18.56■□□□□ 0.56
DNMT3A-213ENST00000484184 AKAP12Q02952 1782 aa18.54■□□□□ 0.56
DNMT3A-213ENST00000484184 RGPD5Q99666 1765 aa18.53■□□□□ 0.56
DNMT3A-213ENST00000484184 CPSF1Q10570 1443 aaKnown RBP18.53■□□□□ 0.56
DNMT3A-213ENST00000484184 TXNRD1Q16881 649 aa18.53■□□□□ 0.56
DNMT3A-213ENST00000484184 ARHGEF25Q86VW2 580 aa18.53■□□□□ 0.56
DNMT3A-213ENST00000484184 ZNF784Q8NCA9 323 aaPredicted RBP18.53■□□□□ 0.56
DNMT3A-213ENST00000484184 SGIP1Q9BQI5 828 aa18.53■□□□□ 0.56
DNMT3A-213ENST00000484184 ATF5Q9Y2D1 282 aaPredicted RBP18.53■□□□□ 0.56
DNMT3A-213ENST00000484184 CDCA7Q9BWT1 371 aaPredicted RBP18.52■□□□□ 0.56
DNMT3A-213ENST00000484184 CARD10Q9BWT7 1032 aa18.52■□□□□ 0.56
DNMT3A-213ENST00000484184 QRICH2Q9H0J4 1663 aa18.52■□□□□ 0.56
DNMT3A-213ENST00000484184 SLC15A2Q16348 729 aa18.51■□□□□ 0.55
DNMT3A-213ENST00000484184 SYT17Q9BSW7 474 aa18.51■□□□□ 0.55
DNMT3A-213ENST00000484184 FHDC1Q9C0D6 1143 aaPredicted RBP18.5■□□□□ 0.55
DNMT3A-213ENST00000484184 STK32BQ9NY57 414 aa18.48■□□□□ 0.55
DNMT3A-213ENST00000484184 TTC21BQ7Z4L5 1316 aa18.48■□□□□ 0.55
DNMT3A-213ENST00000484184 MTFR1LQ9H019 292 aa18.47■□□□□ 0.55
DNMT3A-213ENST00000484184 NFAT5O94916 1531 aa18.47■□□□□ 0.55
DNMT3A-213ENST00000484184 CHD4Q14839 1912 aa18.47■□□□□ 0.55
DNMT3A-213ENST00000484184 TRPM1Q7Z4N2 1603 aa18.46■□□□□ 0.55
DNMT3A-213ENST00000484184 EXOC5O00471 708 aa18.46■□□□□ 0.55
DNMT3A-213ENST00000484184 KCNH5Q8NCM2 988 aa18.45■□□□□ 0.54
DNMT3A-213ENST00000484184 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
DNMT3A-213ENST00000484184 PAPPAQ13219 1627 aa18.45■□□□□ 0.54
DNMT3A-213ENST00000484184 NHSQ6T4R5 1651 aa18.44■□□□□ 0.54
DNMT3A-213ENST00000484184 CSB-PGBD3P0DP91 1061 aa18.44■□□□□ 0.54
DNMT3A-213ENST00000484184 CCDC7Q96M83 1385 aa18.43■□□□□ 0.54
DNMT3A-213ENST00000484184 SOX12O15370 315 aa18.43■□□□□ 0.54
DNMT3A-213ENST00000484184 ZNF692Q9BU19 519 aaPredicted RBP18.43■□□□□ 0.54
DNMT3A-213ENST00000484184 ABCC6O95255 1503 aa18.42■□□□□ 0.54
DNMT3A-213ENST00000484184 EVC2Q86UK5 1308 aa18.42■□□□□ 0.54
DNMT3A-213ENST00000484184 MAP3K5Q99683 1374 aa18.42■□□□□ 0.54
DNMT3A-213ENST00000484184 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
DNMT3A-213ENST00000484184 GOLGB1Q14789 3259 aaKnown RBP18.4■□□□□ 0.54
DNMT3A-213ENST00000484184 ARXQ96QS3 562 aa18.4■□□□□ 0.54
DNMT3A-213ENST00000484184 ZNF827Q17R98 1081 aa18.39■□□□□ 0.53
DNMT3A-213ENST00000484184 ACSBG1Q96GR2 724 aa18.39■□□□□ 0.53
DNMT3A-213ENST00000484184 BTAF1O14981 1849 aa18.39■□□□□ 0.53
DNMT3A-213ENST00000484184 C1QTNF8P60827 252 aa18.38■□□□□ 0.53
DNMT3A-213ENST00000484184 LRRC4BQ9NT99 713 aa18.38■□□□□ 0.53
DNMT3A-213ENST00000484184 KAT6BQ8WYB5 2073 aa18.37■□□□□ 0.53
DNMT3A-213ENST00000484184 L3MBTL2Q969R5 705 aa18.37■□□□□ 0.53
DNMT3A-213ENST00000484184 ERBB3P21860 1342 aa18.37■□□□□ 0.53
DNMT3A-213ENST00000484184 USP31Q70CQ4 1352 aa18.36■□□□□ 0.53
DNMT3A-213ENST00000484184 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
DNMT3A-213ENST00000484184 MON2Q7Z3U7 1717 aa18.36■□□□□ 0.53
DNMT3A-213ENST00000484184 KTN1Q86UP2 1357 aaKnown RBP18.35■□□□□ 0.53
DNMT3A-213ENST00000484184 SENP3-EIF4A1A0A087X0R7 540 aa18.35■□□□□ 0.53
DNMT3A-213ENST00000484184 COL24A1Q17RW2 1714 aa18.35■□□□□ 0.53
DNMT3A-213ENST00000484184 IL2RBP14784 551 aa18.33■□□□□ 0.52
DNMT3A-213ENST00000484184 AKT1S1Q96B36 256 aa18.33■□□□□ 0.52
DNMT3A-213ENST00000484184 NLRP2Q9NX02 1062 aa18.33■□□□□ 0.52
DNMT3A-213ENST00000484184 CEP350Q5VT06 3117 aa18.33■□□□□ 0.52
DNMT3A-213ENST00000484184 CD163L1Q9NR16 1453 aa18.33■□□□□ 0.52
DNMT3A-213ENST00000484184 QSER1Q2KHR3 1735 aa18.32■□□□□ 0.52
DNMT3A-213ENST00000484184 SBNO2Q9Y2G9 1366 aa18.31■□□□□ 0.52
DNMT3A-213ENST00000484184 NME9Q86XW9 330 aa18.31■□□□□ 0.52
DNMT3A-213ENST00000484184 LTN1O94822 1766 aa18.31■□□□□ 0.52
DNMT3A-213ENST00000484184 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.3■□□□□ 0.52
DNMT3A-213ENST00000484184 PNPLA7Q6ZV29 1317 aa18.29■□□□□ 0.52
DNMT3A-213ENST00000484184 ANKRD24Q8TF21 1146 aa18.29■□□□□ 0.52
DNMT3A-213ENST00000484184 SLC16A10Q8TF71 515 aa18.29■□□□□ 0.52
DNMT3A-213ENST00000484184 TUBGCP6Q96RT7 1819 aa18.28■□□□□ 0.52
DNMT3A-213ENST00000484184 GPR162Q16538 588 aa18.28■□□□□ 0.52
DNMT3A-213ENST00000484184 ROCK2O75116 1388 aaKnown RBP18.28■□□□□ 0.52
DNMT3A-213ENST00000484184 SLC27A3Q5K4L6 730 aa18.27■□□□□ 0.52
DNMT3A-213ENST00000484184 SHANK3Q9BYB0 1731 aa18.26■□□□□ 0.51
DNMT3A-213ENST00000484184 KCNQ4P56696 695 aa18.25■□□□□ 0.51
DNMT3A-213ENST00000484184 NLGN2Q8NFZ4 835 aa18.25■□□□□ 0.51
DNMT3A-213ENST00000484184 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
DNMT3A-213ENST00000484184 NSD2O96028 1365 aa18.23■□□□□ 0.51
DNMT3A-213ENST00000484184 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
DNMT3A-213ENST00000484184 LY75O60449 1722 aa18.23■□□□□ 0.51
DNMT3A-213ENST00000484184 POLD1P28340 1107 aa18.22■□□□□ 0.51
DNMT3A-213ENST00000484184 KLHL34Q8N239 644 aa18.22■□□□□ 0.51
DNMT3A-213ENST00000484184 DDX54Q8TDD1 881 aaKnown RBP18.22■□□□□ 0.51
DNMT3A-213ENST00000484184 SLC12A5Q9H2X9 1139 aa18.22■□□□□ 0.51
DNMT3A-213ENST00000484184 YBX3P16989 372 aaKnown RBP eCLIP18.21■□□□□ 0.51
DNMT3A-213ENST00000484184 PRIM1P49642 420 aaKnown RBP18.21■□□□□ 0.51
DNMT3A-213ENST00000484184 IP6K1Q92551 441 aa18.21■□□□□ 0.51
DNMT3A-213ENST00000484184 EDC4Q6P2E9 1401 aaKnown RBP18.21■□□□□ 0.51
DNMT3A-213ENST00000484184 ANKRD36BQ8N2N9 1353 aa18.2■□□□□ 0.5
DNMT3A-213ENST00000484184 PELP1Q8IZL8 1130 aaKnown RBP18.2■□□□□ 0.5
DNMT3A-213ENST00000484184 TFCP2L1Q9NZI6 479 aa18.2■□□□□ 0.5
DNMT3A-213ENST00000484184 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
DNMT3A-213ENST00000484184 IFFO2Q5TF58 517 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms