RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 COL18A1P39060 1754 aa27.12■■□□□ 1.93
NDUFA3-213ENST00000484103 RGPD5Q99666 1765 aa27.12■■□□□ 1.93
NDUFA3-213ENST00000484103 ST20-MTHFSA0A0A6YYL1 179 aa27.12■■□□□ 1.93
NDUFA3-213ENST00000484103 ARHGEF25Q86VW2 580 aa27.12■■□□□ 1.93
NDUFA3-213ENST00000484103 NFAT5O94916 1531 aa27.09■■□□□ 1.93
NDUFA3-213ENST00000484103 WDR17Q8IZU2 1322 aa27.09■■□□□ 1.93
NDUFA3-213ENST00000484103 PARP4Q9UKK3 1724 aaKnown RBP27.08■■□□□ 1.93
NDUFA3-213ENST00000484103 R3HDM1Q15032 1099 aaKnown RBP27.08■■□□□ 1.93
NDUFA3-213ENST00000484103 A0A1W2PP64 1363 aa27.08■■□□□ 1.93
NDUFA3-213ENST00000484103 PCGF6Q9BYE7 350 aa27.07■■□□□ 1.92
NDUFA3-213ENST00000484103 LRRC37A3O60309 1634 aa27.06■■□□□ 1.92
NDUFA3-213ENST00000484103 DDB1Q16531 1140 aa27.06■■□□□ 1.92
NDUFA3-213ENST00000484103 TERF2IPQ9NYB0 399 aa27.06■■□□□ 1.92
NDUFA3-213ENST00000484103 CAMKK2Q96RR4 588 aa27.04■■□□□ 1.92
NDUFA3-213ENST00000484103 TESK2Q96S53 571 aa27.04■■□□□ 1.92
NDUFA3-213ENST00000484103 DISP2A7MBM2 1401 aa27.04■■□□□ 1.92
NDUFA3-213ENST00000484103 EDC4Q6P2E9 1401 aaKnown RBP27.02■■□□□ 1.92
NDUFA3-213ENST00000484103 WNK3Q9BYP7 1800 aa27.01■■□□□ 1.91
NDUFA3-213ENST00000484103 OVOS2A0A0G2JMS6 1433 aa27■■□□□ 1.91
NDUFA3-213ENST00000484103 OVOS2A0A0J9YW53 1432 aa27■■□□□ 1.91
NDUFA3-213ENST00000484103 OVOS2Q6IE36 1432 aa27■■□□□ 1.91
NDUFA3-213ENST00000484103 USP31Q70CQ4 1352 aa27■■□□□ 1.91
NDUFA3-213ENST00000484103 LTN1O94822 1766 aa26.99■■□□□ 1.91
NDUFA3-213ENST00000484103 USP47Q96K76 1375 aa26.99■■□□□ 1.91
NDUFA3-213ENST00000484103 CARD10Q9BWT7 1032 aa26.99■■□□□ 1.91
NDUFA3-213ENST00000484103 NLRP2Q9NX02 1062 aa26.98■■□□□ 1.91
NDUFA3-213ENST00000484103 PTF1AQ7RTS3 328 aa26.97■■□□□ 1.91
NDUFA3-213ENST00000484103 MARCH10Q8NA82 808 aaPredicted RBP26.96■■□□□ 1.91
NDUFA3-213ENST00000484103 PEAK1Q9H792 1746 aa26.96■■□□□ 1.91
NDUFA3-213ENST00000484103 LTV1Q96GA3 475 aaPredicted RBP26.95■■□□□ 1.9
NDUFA3-213ENST00000484103 USP54Q70EL1 1684 aa26.95■■□□□ 1.9
NDUFA3-213ENST00000484103 ANKRD24Q8TF21 1146 aa26.94■■□□□ 1.9
NDUFA3-213ENST00000484103 FBLN1P23142 703 aa26.93■■□□□ 1.9
NDUFA3-213ENST00000484103 TMF1P82094 1093 aa26.93■■□□□ 1.9
NDUFA3-213ENST00000484103 PUS7Q96PZ0 661 aaKnown RBP26.93■■□□□ 1.9
NDUFA3-213ENST00000484103 ERBB3P21860 1342 aa26.92■■□□□ 1.9
NDUFA3-213ENST00000484103 EXOC5O00471 708 aa26.92■■□□□ 1.9
NDUFA3-213ENST00000484103 CDCA7Q9BWT1 371 aaPredicted RBP26.92■■□□□ 1.9
NDUFA3-213ENST00000484103 NUP188Q5SRE5 1749 aa26.92■■□□□ 1.9
NDUFA3-213ENST00000484103 RREB1Q92766 1687 aa26.92■■□□□ 1.9
NDUFA3-213ENST00000484103 PARD3Q8TEW0 1356 aa26.91■■□□□ 1.9
NDUFA3-213ENST00000484103 CCDC7Q96M83 1385 aa26.91■■□□□ 1.9
NDUFA3-213ENST00000484103 LRP5O75197 1615 aa26.9■■□□□ 1.9
NDUFA3-213ENST00000484103 NINLQ9Y2I6 1382 aa26.9■■□□□ 1.9
NDUFA3-213ENST00000484103 COG3Q96JB2 828 aa26.9■■□□□ 1.9
NDUFA3-213ENST00000484103 ABCC6O95255 1503 aa26.9■■□□□ 1.9
NDUFA3-213ENST00000484103 SBF2Q86WG5 1849 aa26.89■■□□□ 1.9
NDUFA3-213ENST00000484103 NBPF14Q5TI25 921 aa26.88■■□□□ 1.89
NDUFA3-213ENST00000484103 C11orf95C9JLR9 678 aaPredicted RBP26.87■■□□□ 1.89
NDUFA3-213ENST00000484103 ANKRD36BQ8N2N9 1353 aa26.86■■□□□ 1.89
NDUFA3-213ENST00000484103 TNS2Q63HR2 1409 aa26.86■■□□□ 1.89
NDUFA3-213ENST00000484103 ACSBG1Q96GR2 724 aa26.86■■□□□ 1.89
NDUFA3-213ENST00000484103 SLC24A1O60721 1099 aa26.85■■□□□ 1.89
NDUFA3-213ENST00000484103 BCL11BQ9C0K0 894 aaPredicted RBP26.85■■□□□ 1.89
NDUFA3-213ENST00000484103 GGNBP2Q9H3C7 697 aa26.85■■□□□ 1.89
NDUFA3-213ENST00000484103 IL2RBP14784 551 aa26.84■■□□□ 1.89
NDUFA3-213ENST00000484103 AMPHP49418 695 aa26.84■■□□□ 1.89
NDUFA3-213ENST00000484103 POLR3GLQ9BT43 218 aa26.83■■□□□ 1.89
NDUFA3-213ENST00000484103 MAP3K19Q56UN5 1328 aa26.83■■□□□ 1.89
NDUFA3-213ENST00000484103 KCNQ2O43526 872 aa26.82■■□□□ 1.88
NDUFA3-213ENST00000484103 IP6K1Q92551 441 aa26.82■■□□□ 1.88
NDUFA3-213ENST00000484103 RRS1Q15050 365 aaKnown RBP26.81■■□□□ 1.88
NDUFA3-213ENST00000484103 HOXC9P31274 260 aa26.78■■□□□ 1.88
NDUFA3-213ENST00000484103 ANO8Q9HCE9 1232 aaPredicted RBP26.78■■□□□ 1.88
NDUFA3-213ENST00000484103 FYB1O15117 783 aa26.77■■□□□ 1.88
NDUFA3-213ENST00000484103 PLSCR1O15162 318 aa26.77■■□□□ 1.88
NDUFA3-213ENST00000484103 DDX54Q8TDD1 881 aaKnown RBP26.77■■□□□ 1.88
NDUFA3-213ENST00000484103 CDCA8Q53HL2 280 aa26.76■■□□□ 1.87
NDUFA3-213ENST00000484103 CCER1Q8TC90 406 aaPredicted RBP26.76■■□□□ 1.87
NDUFA3-213ENST00000484103 PROM2Q8N271 834 aa26.74■■□□□ 1.87
NDUFA3-213ENST00000484103 RGPD3A6NKT7 1758 aaPredicted RBP26.74■■□□□ 1.87
NDUFA3-213ENST00000484103 RGPD4Q7Z3J3 1758 aa26.74■■□□□ 1.87
NDUFA3-213ENST00000484103 BCL9O00512 1426 aa26.73■■□□□ 1.87
NDUFA3-213ENST00000484103 USHBP1Q8N6Y0 703 aa26.73■■□□□ 1.87
NDUFA3-213ENST00000484103 RGPD2P0DJD1 1756 aa26.73■■□□□ 1.87
NDUFA3-213ENST00000484103 KIF20BQ96Q89 1820 aa26.72■■□□□ 1.87
NDUFA3-213ENST00000484103 TXNRD1Q16881 649 aa26.72■■□□□ 1.87
NDUFA3-213ENST00000484103 TIMELESSQ9UNS1 1208 aa26.72■■□□□ 1.87
NDUFA3-213ENST00000484103 MYOM1P52179 1685 aa26.72■■□□□ 1.87
NDUFA3-213ENST00000484103 NSD3Q9BZ95 1437 aa26.72■■□□□ 1.87
NDUFA3-213ENST00000484103 NHSQ6T4R5 1651 aa26.71■■□□□ 1.87
NDUFA3-213ENST00000484103 CLSPNQ9HAW4 1339 aa26.7■■□□□ 1.87
NDUFA3-213ENST00000484103 FAM208AQ9UK61 1670 aaKnown RBP26.7■■□□□ 1.87
NDUFA3-213ENST00000484103 CARD14Q9BXL6 1004 aa26.7■■□□□ 1.86
NDUFA3-213ENST00000484103 PDGFDQ9GZP0 370 aaPredicted RBP26.7■■□□□ 1.86
NDUFA3-213ENST00000484103 PPP1R1BQ9UD71 204 aaPredicted RBP26.69■■□□□ 1.86
NDUFA3-213ENST00000484103 SYTL4Q96C24 671 aaPredicted RBP26.67■■□□□ 1.86
NDUFA3-213ENST00000484103 KAT6BQ8WYB5 2073 aa26.67■■□□□ 1.86
NDUFA3-213ENST00000484103 PPM1GO15355 546 aaPredicted RBP26.66■■□□□ 1.86
NDUFA3-213ENST00000484103 SPON1Q9HCB6 807 aa26.66■■□□□ 1.86
NDUFA3-213ENST00000484103 STK32BQ9NY57 414 aa26.66■■□□□ 1.86
NDUFA3-213ENST00000484103 MEGF6O75095 1541 aa26.65■■□□□ 1.86
NDUFA3-213ENST00000484103 HSP90AB2PQ58FF8 381 aa26.65■■□□□ 1.86
NDUFA3-213ENST00000484103 NBPF6Q5VWK0 638 aa26.65■■□□□ 1.86
NDUFA3-213ENST00000484103 NBPF4Q96M43 638 aa26.65■■□□□ 1.86
NDUFA3-213ENST00000484103 RTL1A6NKG5 1358 aa26.65■■□□□ 1.86
NDUFA3-213ENST00000484103 BTAF1O14981 1849 aa26.65■■□□□ 1.86
NDUFA3-213ENST00000484103 ZBTB7AO95365 584 aa26.64■■□□□ 1.86
NDUFA3-213ENST00000484103 SMG6Q86US8 1419 aaKnown RBP26.64■■□□□ 1.85
NDUFA3-213ENST00000484103 EMILIN1Q9Y6C2 1016 aa26.63■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms