RNA–Protein interactions for RNA: ENST00000484006.1

THUMPD3-209, Transcript of THUMP domain containing 3, humanhuman

TSL 4

Gene THUMPD3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-209ENST00000484006 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
THUMPD3-209ENST00000484006 FAM117AQ9C073 453 aa9.52□□□□□ -0.89
THUMPD3-209ENST00000484006 GPBP1L1Q9HC44 474 aaPredicted RBP9.52□□□□□ -0.89
THUMPD3-209ENST00000484006 CC2D2AQ9P2K1 1620 aa9.52□□□□□ -0.89
THUMPD3-209ENST00000484006 MAN1A2O60476 641 aa9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 BMP2P12643 396 aa9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 CCDC116Q8IYX3 515 aa9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 PROCA1Q8NCQ7 364 aaPredicted RBP9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 LRRN4Q8WUT4 740 aa9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 ARHGAP9Q9BRR9 750 aa9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 FKBPLQ9UIM3 349 aa9.51□□□□□ -0.89
THUMPD3-209ENST00000484006 SUPT5HO00267 1087 aaKnown RBP9.5□□□□□ -0.89
THUMPD3-209ENST00000484006 GMPRP36959 345 aa9.5□□□□□ -0.89
THUMPD3-209ENST00000484006 ERFEQ4G0M1 354 aa9.5□□□□□ -0.89
THUMPD3-209ENST00000484006 MEIOBQ8N635 442 aa9.5□□□□□ -0.89
THUMPD3-209ENST00000484006 CDV3Q9UKY7 258 aaKnown RBP9.5□□□□□ -0.89
THUMPD3-209ENST00000484006 FAM181BA6NEQ2 426 aa9.49□□□□□ -0.89
THUMPD3-209ENST00000484006 ZBTB33Q86T24 672 aa9.49□□□□□ -0.89
THUMPD3-209ENST00000484006 LINC00528Q8N1L1 170 aa9.49□□□□□ -0.89
THUMPD3-209ENST00000484006 TSEN34Q9BSV6 310 aaKnown RBP9.49□□□□□ -0.89
THUMPD3-209ENST00000484006 ZC3H4Q9UPT8 1303 aaKnown RBP9.49□□□□□ -0.89
THUMPD3-209ENST00000484006 SOBPA7XYQ1 873 aa9.48□□□□□ -0.89
THUMPD3-209ENST00000484006 NR6A1Q15406 480 aa9.48□□□□□ -0.89
THUMPD3-209ENST00000484006 MROH2BQ7Z745 1585 aa9.48□□□□□ -0.89
THUMPD3-209ENST00000484006 BAZ1AQ9NRL2 1556 aaPredicted RBP9.48□□□□□ -0.89
THUMPD3-209ENST00000484006 SMARCA4P51532 1647 aa9.48□□□□□ -0.89
THUMPD3-209ENST00000484006 AP1G2O75843 785 aa9.47□□□□□ -0.89
THUMPD3-209ENST00000484006 PTK2Q05397 1052 aa9.47□□□□□ -0.89
THUMPD3-209ENST00000484006 PGPEP1Q9NXJ5 209 aa9.47□□□□□ -0.89
THUMPD3-209ENST00000484006 FBXO31Q5XUX0 539 aaPredicted RBP9.46□□□□□ -0.9
THUMPD3-209ENST00000484006 PNMA1Q8ND90 353 aa9.46□□□□□ -0.9
THUMPD3-209ENST00000484006 SLC10A4Q96EP9 437 aa9.46□□□□□ -0.9
THUMPD3-209ENST00000484006 GPSM3Q9Y4H4 160 aa9.46□□□□□ -0.9
THUMPD3-209ENST00000484006 DHX9Q08211 1270 aaKnown RBP9.45□□□□□ -0.9
THUMPD3-209ENST00000484006 PPP1R26Q5T8A7 1209 aaPredicted RBP9.45□□□□□ -0.9
THUMPD3-209ENST00000484006 ZSCAN1Q8NBB4 408 aa9.45□□□□□ -0.9
THUMPD3-209ENST00000484006 KCTD15Q96SI1 283 aaPredicted RBP9.45□□□□□ -0.9
THUMPD3-209ENST00000484006 SOS2Q07890 1332 aaPredicted RBP9.45□□□□□ -0.9
THUMPD3-209ENST00000484006 ERBB4Q15303 1308 aa9.45□□□□□ -0.9
THUMPD3-209ENST00000484006 Q6ZVU0 165 aa9.42□□□□□ -0.9
THUMPD3-209ENST00000484006 PPFIA3O75145 1194 aa9.41□□□□□ -0.9
THUMPD3-209ENST00000484006 VSIG8P0DPA2 414 aa9.41□□□□□ -0.9
THUMPD3-209ENST00000484006 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.41□□□□□ -0.9
THUMPD3-209ENST00000484006 DNMT3LQ9UJW3 386 aa9.41□□□□□ -0.9
THUMPD3-209ENST00000484006 ATAD2BQ9ULI0 1458 aa9.4□□□□□ -0.9
THUMPD3-209ENST00000484006 RSF1Q96T23 1441 aaPredicted RBP9.4□□□□□ -0.9
THUMPD3-209ENST00000484006 WIZO95785 1651 aa9.4□□□□□ -0.9
THUMPD3-209ENST00000484006 ADAM32Q8TC27 787 aa9.4□□□□□ -0.9
THUMPD3-209ENST00000484006 SMARCA2P51531 1590 aa9.39□□□□□ -0.91
THUMPD3-209ENST00000484006 TTLL8A6PVC2 850 aa9.39□□□□□ -0.91
THUMPD3-209ENST00000484006 USP17L8P0C7I0 530 aa9.39□□□□□ -0.91
THUMPD3-209ENST00000484006 RFC5P40937 340 aa9.39□□□□□ -0.91
THUMPD3-209ENST00000484006 CBLBQ13191 982 aa9.39□□□□□ -0.91
THUMPD3-209ENST00000484006 GOPCQ9HD26 462 aa9.39□□□□□ -0.91
THUMPD3-209ENST00000484006 BAZ1BQ9UIG0 1483 aaKnown RBP9.39□□□□□ -0.91
THUMPD3-209ENST00000484006 LORP23490 312 aaPredicted RBP9.38□□□□□ -0.91
THUMPD3-209ENST00000484006 NBPF20Q3BBV1 942 aa9.38□□□□□ -0.91
THUMPD3-209ENST00000484006 EPS8L1Q8TE68 723 aa9.38□□□□□ -0.91
THUMPD3-209ENST00000484006 PCMTD1Q96MG8 357 aaPredicted RBP9.38□□□□□ -0.91
THUMPD3-209ENST00000484006 OCSTAMPQ9BR26 566 aa9.38□□□□□ -0.91
THUMPD3-209ENST00000484006 SPINT1O43278 529 aa9.37□□□□□ -0.91
THUMPD3-209ENST00000484006 INTS6LQ5JSJ4 861 aaKnown RBP9.37□□□□□ -0.91
THUMPD3-209ENST00000484006 FIGNL2A6NMB9 653 aa9.36□□□□□ -0.91
THUMPD3-209ENST00000484006 TMEM259Q4ZIN3 620 aa9.36□□□□□ -0.91
THUMPD3-209ENST00000484006 DZIP3Q86Y13 1208 aaKnown RBP9.36□□□□□ -0.91
THUMPD3-209ENST00000484006 HMX1Q9NP08 348 aaPredicted RBP9.36□□□□□ -0.91
THUMPD3-209ENST00000484006 SLC24A1O60721 1099 aa9.35□□□□□ -0.91
THUMPD3-209ENST00000484006 TRIM52Q96A61 297 aa9.35□□□□□ -0.91
THUMPD3-209ENST00000484006 PTSQ03393 145 aa9.34□□□□□ -0.91
THUMPD3-209ENST00000484006 NCAPD3P42695 1498 aa9.34□□□□□ -0.91
THUMPD3-209ENST00000484006 RELBQ01201 579 aa9.32□□□□□ -0.92
THUMPD3-209ENST00000484006 AGBL1Q96MI9 1066 aa9.32□□□□□ -0.92
THUMPD3-209ENST00000484006 RAB15P59190 212 aa9.31□□□□□ -0.92
THUMPD3-209ENST00000484006 NEUROD2Q15784 382 aa9.31□□□□□ -0.92
THUMPD3-209ENST00000484006 IL27Q8NEV9 243 aa9.31□□□□□ -0.92
THUMPD3-209ENST00000484006 TMPRSS4Q9NRS4 437 aa9.31□□□□□ -0.92
THUMPD3-209ENST00000484006 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
THUMPD3-209ENST00000484006 ESPNB1AK53 854 aa9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 ERVH48-1M5A8F1 160 aa9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 CTSOP43234 321 aaPredicted RBP9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 CCDC155Q8N6L0 562 aa9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 ZNF784Q8NCA9 323 aaPredicted RBP9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 INSM2Q96T92 566 aaPredicted RBP9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 TRIM34Q9BYJ4 488 aa9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 ZNF395Q9H8N7 513 aaPredicted RBP9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 POLMQ9NP87 494 aaPredicted RBP9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 HMGXB3Q12766 1538 aa9.29□□□□□ -0.92
THUMPD3-209ENST00000484006 SLC35F4A4IF30 521 aa9.28□□□□□ -0.92
THUMPD3-209ENST00000484006 NANOS1Q8WY41 292 aaKnown RBP9.28□□□□□ -0.92
THUMPD3-209ENST00000484006 PEG3Q9GZU2 1588 aa9.28□□□□□ -0.92
THUMPD3-209ENST00000484006 ZBBXA8MT70 800 aa9.27□□□□□ -0.93
THUMPD3-209ENST00000484006 ADH1AP07327 375 aa9.27□□□□□ -0.93
THUMPD3-209ENST00000484006 ADD1P35611 737 aaKnown RBP9.27□□□□□ -0.93
THUMPD3-209ENST00000484006 GPR161Q8N6U8 529 aaKnown RBP9.27□□□□□ -0.93
THUMPD3-209ENST00000484006 TOP2AP11388 1531 aaKnown RBP9.26□□□□□ -0.93
THUMPD3-209ENST00000484006 LILRA1O75019 489 aa9.26□□□□□ -0.93
THUMPD3-209ENST00000484006 PTGIRP43119 386 aa9.26□□□□□ -0.93
THUMPD3-209ENST00000484006 CCDC125Q86Z20 511 aa9.26□□□□□ -0.93
THUMPD3-209ENST00000484006 CNTNAP3BQ96NU0 1288 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms