RNA–Protein interactions for RNA: ENST00000483962.1

SNED1-210, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 2

Gene SNED1, Length 938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-210ENST00000483962 RRS1Q15050 365 aaKnown RBP26.62■■□□□ 1.85
SNED1-210ENST00000483962 MAP2P11137 1827 aaKnown RBP26.62■■□□□ 1.85
SNED1-210ENST00000483962 NPC1L1Q9UHC9 1359 aa26.61■■□□□ 1.85
SNED1-210ENST00000483962 ABCC6O95255 1503 aa26.61■■□□□ 1.85
SNED1-210ENST00000483962 MORC1Q86VD1 984 aa26.61■■□□□ 1.85
SNED1-210ENST00000483962 TRPC5Q9UL62 973 aaPredicted RBP26.61■■□□□ 1.85
SNED1-210ENST00000483962 TNNT2P45379 298 aaPredicted RBP26.6■■□□□ 1.85
SNED1-210ENST00000483962 CC2D1BQ5T0F9 858 aaKnown RBP26.6■■□□□ 1.85
SNED1-210ENST00000483962 COL5A2P05997 1499 aaPredicted RBP26.6■■□□□ 1.85
SNED1-210ENST00000483962 STRN4Q9NRL3 753 aa26.59■■□□□ 1.85
SNED1-210ENST00000483962 PEAK1Q9H792 1746 aa26.59■■□□□ 1.85
SNED1-210ENST00000483962 VPS72Q15906 364 aa26.58■■□□□ 1.85
SNED1-210ENST00000483962 CNGB1Q14028 1251 aaPredicted RBP26.57■■□□□ 1.84
SNED1-210ENST00000483962 IP6K1Q92551 441 aa26.57■■□□□ 1.84
SNED1-210ENST00000483962 EVA1CP58658 441 aa26.56■■□□□ 1.84
SNED1-210ENST00000483962 EMILIN1Q9Y6C2 1016 aa26.56■■□□□ 1.84
SNED1-210ENST00000483962 HOXC9P31274 260 aa26.55■■□□□ 1.84
SNED1-210ENST00000483962 AMPHP49418 695 aa26.55■■□□□ 1.84
SNED1-210ENST00000483962 POLKQ9UBT6 870 aa26.55■■□□□ 1.84
SNED1-210ENST00000483962 GLI3P10071 1580 aa26.54■■□□□ 1.84
SNED1-210ENST00000483962 LARP1Q6PKG0 1096 aaKnown RBP26.54■■□□□ 1.84
SNED1-210ENST00000483962 GJD4Q96KN9 370 aaPredicted RBP26.54■■□□□ 1.84
SNED1-210ENST00000483962 RXRBP28702 533 aa26.53■■□□□ 1.84
SNED1-210ENST00000483962 RBM6P78332 1123 aaKnown RBP26.53■■□□□ 1.84
SNED1-210ENST00000483962 CCDC9Q9Y3X0 531 aaKnown RBP26.53■■□□□ 1.84
SNED1-210ENST00000483962 RTL1A6NKG5 1358 aa26.53■■□□□ 1.84
SNED1-210ENST00000483962 BLMP54132 1417 aaPredicted RBP26.52■■□□□ 1.84
SNED1-210ENST00000483962 SPATA31A5Q5VU36 1347 aa26.52■■□□□ 1.84
SNED1-210ENST00000483962 SPATA31A7Q8IWB4 1347 aa26.52■■□□□ 1.84
SNED1-210ENST00000483962 KIF24Q5T7B8 1368 aa26.5■■□□□ 1.83
SNED1-210ENST00000483962 WDR17Q8IZU2 1322 aa26.5■■□□□ 1.83
SNED1-210ENST00000483962 FLT4P35916 1363 aa26.49■■□□□ 1.83
SNED1-210ENST00000483962 ERBB3P21860 1342 aa26.49■■□□□ 1.83
SNED1-210ENST00000483962 PPM1GO15355 546 aaPredicted RBP26.49■■□□□ 1.83
SNED1-210ENST00000483962 ANKRD24Q8TF21 1146 aa26.49■■□□□ 1.83
SNED1-210ENST00000483962 SPATA31A1Q5TZJ5 1347 aa26.48■■□□□ 1.83
SNED1-210ENST00000483962 HSP90AB2PQ58FF8 381 aa26.48■■□□□ 1.83
SNED1-210ENST00000483962 CRB1P82279 1406 aa26.48■■□□□ 1.83
SNED1-210ENST00000483962 SMG6Q86US8 1419 aaKnown RBP26.48■■□□□ 1.83
SNED1-210ENST00000483962 ILDR2Q71H61 639 aa26.47■■□□□ 1.83
SNED1-210ENST00000483962 LTV1Q96GA3 475 aaPredicted RBP26.47■■□□□ 1.83
SNED1-210ENST00000483962 INSRP06213 1382 aa26.46■■□□□ 1.83
SNED1-210ENST00000483962 CSB-PGBD3P0DP91 1061 aa26.46■■□□□ 1.83
SNED1-210ENST00000483962 RGPD2P0DJD1 1756 aa26.46■■□□□ 1.83
SNED1-210ENST00000483962 TOM1L2Q6ZVM7 507 aa26.45■■□□□ 1.82
SNED1-210ENST00000483962 USP35Q9P2H5 1018 aa26.45■■□□□ 1.82
SNED1-210ENST00000483962 CDK12Q9NYV4 1490 aaPredicted RBP26.43■■□□□ 1.82
SNED1-210ENST00000483962 FAM208AQ9UK61 1670 aaKnown RBP26.43■■□□□ 1.82
SNED1-210ENST00000483962 RGS12O14924 1447 aa26.42■■□□□ 1.82
SNED1-210ENST00000483962 FAM98CQ17RN3 349 aaKnown RBP26.42■■□□□ 1.82
SNED1-210ENST00000483962 CARD10Q9BWT7 1032 aa26.42■■□□□ 1.82
SNED1-210ENST00000483962 ONECUT3O60422 494 aaPredicted RBP26.41■■□□□ 1.82
SNED1-210ENST00000483962 MTHFSP49914 203 aa26.41■■□□□ 1.82
SNED1-210ENST00000483962 TCP11L2Q8N4U5 519 aa26.4■■□□□ 1.82
SNED1-210ENST00000483962 NLRP2Q9NX02 1062 aa26.4■■□□□ 1.82
SNED1-210ENST00000483962 PARD3Q8TEW0 1356 aa26.4■■□□□ 1.82
SNED1-210ENST00000483962 THSD7AQ9UPZ6 1657 aa26.38■■□□□ 1.81
SNED1-210ENST00000483962 WNK3Q9BYP7 1800 aa26.38■■□□□ 1.81
SNED1-210ENST00000483962 BARGINQ6ZT62 677 aa26.38■■□□□ 1.81
SNED1-210ENST00000483962 THRAP3Q9Y2W1 955 aaKnown RBP26.38■■□□□ 1.81
SNED1-210ENST00000483962 BRWD3Q6RI45 1802 aa26.37■■□□□ 1.81
SNED1-210ENST00000483962 PPP2R1AP30153 589 aa26.36■■□□□ 1.81
SNED1-210ENST00000483962 SEPT12Q8IYM1 358 aa26.36■■□□□ 1.81
SNED1-210ENST00000483962 EIF4A2Q14240 407 aaKnown RBP26.35■■□□□ 1.81
SNED1-210ENST00000483962 NBPF6Q5VWK0 638 aa26.35■■□□□ 1.81
SNED1-210ENST00000483962 NBPF4Q96M43 638 aa26.35■■□□□ 1.81
SNED1-210ENST00000483962 DISP2A7MBM2 1401 aa26.32■■□□□ 1.8
SNED1-210ENST00000483962 PARP4Q9UKK3 1724 aaKnown RBP26.31■■□□□ 1.8
SNED1-210ENST00000483962 A0A0G2JS52 829 aa26.31■■□□□ 1.8
SNED1-210ENST00000483962 MYT1Q01538 1121 aa26.31■■□□□ 1.8
SNED1-210ENST00000483962 RALBP1Q15311 655 aa26.31■■□□□ 1.8
SNED1-210ENST00000483962 USHBP1Q8N6Y0 703 aa26.31■■□□□ 1.8
SNED1-210ENST00000483962 EYA1Q99502 592 aa26.3■■□□□ 1.8
SNED1-210ENST00000483962 COL3A1P02461 1466 aaPredicted RBP26.3■■□□□ 1.8
SNED1-210ENST00000483962 IL13P35225 146 aa26.28■■□□□ 1.8
SNED1-210ENST00000483962 PRKRIP1Q9H875 184 aaPredicted RBP26.28■■□□□ 1.8
SNED1-210ENST00000483962 NCAPD2Q15021 1401 aa26.28■■□□□ 1.8
SNED1-210ENST00000483962 LRRC37A3O60309 1634 aa26.27■■□□□ 1.8
SNED1-210ENST00000483962 RGPD1P0DJD0 1748 aa26.27■■□□□ 1.8
SNED1-210ENST00000483962 CDCA7Q9BWT1 371 aaPredicted RBP26.26■■□□□ 1.79
SNED1-210ENST00000483962 IL2RBP14784 551 aa26.25■■□□□ 1.79
SNED1-210ENST00000483962 IGSF1Q8N6C5 1336 aa26.24■■□□□ 1.79
SNED1-210ENST00000483962 DIAPH1O60610 1272 aaKnown RBP26.23■■□□□ 1.79
SNED1-210ENST00000483962 MEGF6O75095 1541 aa26.23■■□□□ 1.79
SNED1-210ENST00000483962 MYBBP1AQ9BQG0 1328 aaKnown RBP26.22■■□□□ 1.79
SNED1-210ENST00000483962 KRT27Q7Z3Y8 459 aa26.22■■□□□ 1.79
SNED1-210ENST00000483962 DDB1Q16531 1140 aa26.21■■□□□ 1.79
SNED1-210ENST00000483962 CFAP53Q96M91 514 aa26.21■■□□□ 1.79
SNED1-210ENST00000483962 OVOS2A0A0G2JMS6 1433 aa26.18■■□□□ 1.78
SNED1-210ENST00000483962 EXOC5O00471 708 aa26.18■■□□□ 1.78
SNED1-210ENST00000483962 PDE3BQ13370 1112 aa26.18■■□□□ 1.78
SNED1-210ENST00000483962 FAM182BQ5T319 152 aa26.18■■□□□ 1.78
SNED1-210ENST00000483962 TNS2Q63HR2 1409 aa26.18■■□□□ 1.78
SNED1-210ENST00000483962 AEBP1Q8IUX7 1158 aa26.18■■□□□ 1.78
SNED1-210ENST00000483962 RAPGEF4Q8WZA2 1011 aa26.18■■□□□ 1.78
SNED1-210ENST00000483962 SHANK3Q9BYB0 1731 aa26.17■■□□□ 1.78
SNED1-210ENST00000483962 TATP17735 454 aaPredicted RBP26.16■■□□□ 1.78
SNED1-210ENST00000483962 SULT6B1Q6IMI4 303 aa26.16■■□□□ 1.78
SNED1-210ENST00000483962 KDRP35968 1356 aa26.15■■□□□ 1.78
SNED1-210ENST00000483962 MARCH10Q8NA82 808 aaPredicted RBP26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms