RNA–Protein interactions for RNA: ENST00000483881.1

PKP4-212, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-212ENST00000483881 HOXA2O43364 376 aa6.77□□□□□ -1.33
PKP4-212ENST00000483881 ALYREFQ86V81 257 aaKnown RBP6.77□□□□□ -1.33
PKP4-212ENST00000483881 RETREG3Q86VR2 466 aa6.77□□□□□ -1.33
PKP4-212ENST00000483881 SPINT1O43278 529 aa6.76□□□□□ -1.33
PKP4-212ENST00000483881 DOC2BQ14184 412 aa6.76□□□□□ -1.33
PKP4-212ENST00000483881 CD163Q86VB7 1156 aa6.76□□□□□ -1.33
PKP4-212ENST00000483881 FOXJ1Q92949 421 aa6.76□□□□□ -1.33
PKP4-212ENST00000483881 USP46P62068 366 aa6.75□□□□□ -1.33
PKP4-212ENST00000483881 PTPRNQ16849 979 aa6.74□□□□□ -1.33
PKP4-212ENST00000483881 NBPF11Q86T75 865 aa6.74□□□□□ -1.33
PKP4-212ENST00000483881 KRTAP17-1Q9BYP8 105 aa6.74□□□□□ -1.33
PKP4-212ENST00000483881 LRRC4BQ9NT99 713 aa6.73□□□□□ -1.33
PKP4-212ENST00000483881 P3H3Q8IVL6 736 aa6.72□□□□□ -1.33
PKP4-212ENST00000483881 MKL2Q9ULH7 1088 aa6.72□□□□□ -1.33
PKP4-212ENST00000483881 GPR25O00155 361 aa6.71□□□□□ -1.34
PKP4-212ENST00000483881 OIP5O43482 229 aa6.71□□□□□ -1.34
PKP4-212ENST00000483881 CTSOP43234 321 aaPredicted RBP6.71□□□□□ -1.34
PKP4-212ENST00000483881 CHRNA4P43681 627 aa6.71□□□□□ -1.34
PKP4-212ENST00000483881 C4orf48Q5BLP8 95 aa6.71□□□□□ -1.34
PKP4-212ENST00000483881 SUV39H2Q9H5I1 410 aa6.71□□□□□ -1.34
PKP4-212ENST00000483881 GNPATO15228 680 aa6.7□□□□□ -1.34
PKP4-212ENST00000483881 CBLBQ13191 982 aa6.7□□□□□ -1.34
PKP4-212ENST00000483881 GRIN2CQ14957 1233 aa6.7□□□□□ -1.34
PKP4-212ENST00000483881 ARHGEF1Q92888 912 aaKnown RBP6.7□□□□□ -1.34
PKP4-212ENST00000483881 KDM2AQ9Y2K7 1162 aa6.7□□□□□ -1.34
PKP4-212ENST00000483881 Q6ZVU0 165 aa6.68□□□□□ -1.34
PKP4-212ENST00000483881 EMILIN1Q9Y6C2 1016 aa6.68□□□□□ -1.34
PKP4-212ENST00000483881 SHISA8B8ZZ34 492 aa6.67□□□□□ -1.34
PKP4-212ENST00000483881 FSHRP23945 695 aa6.67□□□□□ -1.34
PKP4-212ENST00000483881 ZNF837Q96EG3 531 aaPredicted RBP6.66□□□□□ -1.34
PKP4-212ENST00000483881 INSM2Q96T92 566 aaPredicted RBP6.66□□□□□ -1.34
PKP4-212ENST00000483881 PCDHGC3Q9UN70 934 aa6.66□□□□□ -1.34
PKP4-212ENST00000483881 ARID1BQ8NFD5 2236 aaPredicted RBP6.66□□□□□ -1.34
PKP4-212ENST00000483881 C6orf229H3BNL8 230 aa6.65□□□□□ -1.34
PKP4-212ENST00000483881 LINC00114Q6XXX2 140 aa6.65□□□□□ -1.34
PKP4-212ENST00000483881 RNF217Q8TC41 542 aa6.65□□□□□ -1.34
PKP4-212ENST00000483881 RSPO4Q2I0M5 234 aaPredicted RBP6.64□□□□□ -1.35
PKP4-212ENST00000483881 RRAGCQ9HB90 399 aa6.64□□□□□ -1.35
PKP4-212ENST00000483881 TULP1O00294 542 aaPredicted RBP6.63□□□□□ -1.35
PKP4-212ENST00000483881 YBX3P16989 372 aaKnown RBP eCLIP6.63□□□□□ -1.35
PKP4-212ENST00000483881 C1orf229Q6ZS94 237 aaPredicted RBP6.63□□□□□ -1.35
PKP4-212ENST00000483881 CCDC116Q8IYX3 515 aa6.63□□□□□ -1.35
PKP4-212ENST00000483881 AGBL1Q96MI9 1066 aa6.63□□□□□ -1.35
PKP4-212ENST00000483881 GPR37O15354 613 aa6.62□□□□□ -1.35
PKP4-212ENST00000483881 HOXB4P17483 251 aaPredicted RBP6.62□□□□□ -1.35
PKP4-212ENST00000483881 AGERQ15109 404 aa6.62□□□□□ -1.35
PKP4-212ENST00000483881 DBN1Q16643 649 aa6.62□□□□□ -1.35
PKP4-212ENST00000483881 POLMQ9NP87 494 aaPredicted RBP6.62□□□□□ -1.35
PKP4-212ENST00000483881 CTHP32929 405 aa6.61□□□□□ -1.35
PKP4-212ENST00000483881 NKAPLQ5M9Q1 402 aa6.61□□□□□ -1.35
PKP4-212ENST00000483881 FOXR1Q6PIV2 292 aa6.61□□□□□ -1.35
PKP4-212ENST00000483881 TRIM22Q8IYM9 498 aa6.61□□□□□ -1.35
PKP4-212ENST00000483881 OXCT2Q9BYC2 517 aaPredicted RBP6.6□□□□□ -1.35
PKP4-212ENST00000483881 FDX1P10109 184 aa6.59□□□□□ -1.35
PKP4-212ENST00000483881 RELBQ01201 579 aa6.59□□□□□ -1.35
PKP4-212ENST00000483881 LAMC2Q13753 1193 aa6.59□□□□□ -1.35
PKP4-212ENST00000483881 PPP1R26Q5T8A7 1209 aaPredicted RBP6.59□□□□□ -1.35
PKP4-212ENST00000483881 RBM26Q5T8P6 1007 aaKnown RBP6.59□□□□□ -1.35
PKP4-212ENST00000483881 VASH1Q7L8A9 365 aaPredicted RBP6.59□□□□□ -1.35
PKP4-212ENST00000483881 BPHLQ86WA6 291 aaPredicted RBP6.59□□□□□ -1.35
PKP4-212ENST00000483881 PRR7Q8TB68 274 aa6.59□□□□□ -1.35
PKP4-212ENST00000483881 MAP4K5Q9Y4K4 846 aa6.59□□□□□ -1.35
PKP4-212ENST00000483881 MX2P20592 715 aa6.58□□□□□ -1.36
PKP4-212ENST00000483881 FZD5Q13467 585 aa6.58□□□□□ -1.36
PKP4-212ENST00000483881 GTPBP3Q969Y2 492 aaKnown RBP6.58□□□□□ -1.36
PKP4-212ENST00000483881 GMCL1Q96IK5 515 aa6.58□□□□□ -1.36
PKP4-212ENST00000483881 C1QTNF2Q9BXJ5 285 aa6.58□□□□□ -1.36
PKP4-212ENST00000483881 ZNF395Q9H8N7 513 aaPredicted RBP6.58□□□□□ -1.36
PKP4-212ENST00000483881 GATA4P43694 442 aa6.57□□□□□ -1.36
PKP4-212ENST00000483881 MCTP1Q6DN14 999 aa6.57□□□□□ -1.36
PKP4-212ENST00000483881 KCNV2Q8TDN2 545 aa6.57□□□□□ -1.36
PKP4-212ENST00000483881 KRTAP4-11Q9BYQ6 195 aa6.57□□□□□ -1.36
PKP4-212ENST00000483881 HYAL3O43820 417 aaPredicted RBP6.56□□□□□ -1.36
PKP4-212ENST00000483881 TXKP42681 527 aa6.56□□□□□ -1.36
PKP4-212ENST00000483881 FOXD4L5Q5VV16 416 aaPredicted RBP6.56□□□□□ -1.36
PKP4-212ENST00000483881 SMYD5Q6GMV2 418 aa6.56□□□□□ -1.36
PKP4-212ENST00000483881 DESI1Q6ICB0 168 aa6.56□□□□□ -1.36
PKP4-212ENST00000483881 PGPEP1Q9NXJ5 209 aa6.56□□□□□ -1.36
PKP4-212ENST00000483881 SEMA3EO15041 775 aa6.55□□□□□ -1.36
PKP4-212ENST00000483881 LRP8Q14114 963 aa6.55□□□□□ -1.36
PKP4-212ENST00000483881 MAP10Q9P2G4 905 aa6.55□□□□□ -1.36
PKP4-212ENST00000483881 NSFL1CQ9UNZ2 370 aaKnown RBP6.55□□□□□ -1.36
PKP4-212ENST00000483881 DYRK3O43781 588 aa6.54□□□□□ -1.36
PKP4-212ENST00000483881 PRSS36Q5K4E3 855 aa6.54□□□□□ -1.36
PKP4-212ENST00000483881 PRPF38BQ5VTL8 546 aaKnown RBP6.54□□□□□ -1.36
PKP4-212ENST00000483881 EDARADDQ8WWZ3 215 aa6.54□□□□□ -1.36
PKP4-212ENST00000483881 KRTAP4-5Q9BYR2 181 aa6.54□□□□□ -1.36
PKP4-212ENST00000483881 GNB5O14775 395 aa6.53□□□□□ -1.36
PKP4-212ENST00000483881 LYPD8Q6UX82 237 aa6.53□□□□□ -1.36
PKP4-212ENST00000483881 RIPOR1Q6ZS17 1223 aa6.53□□□□□ -1.36
PKP4-212ENST00000483881 RHOQP17081 205 aa6.52□□□□□ -1.37
PKP4-212ENST00000483881 LYSMD3Q7Z3D4 306 aa6.52□□□□□ -1.37
PKP4-212ENST00000483881 NUTM1Q86Y26 1132 aa6.52□□□□□ -1.37
PKP4-212ENST00000483881 TRMT44Q8IYL2 757 aaKnown RBP6.52□□□□□ -1.37
PKP4-212ENST00000483881 TRERF1Q96PN7 1200 aa6.52□□□□□ -1.37
PKP4-212ENST00000483881 FMNL2Q96PY5 1086 aa6.52□□□□□ -1.37
PKP4-212ENST00000483881 TPSG1Q9NRR2 321 aa6.52□□□□□ -1.37
PKP4-212ENST00000483881 PAX4O43316 350 aa6.51□□□□□ -1.37
PKP4-212ENST00000483881 F12P00748 615 aaPredicted RBP6.51□□□□□ -1.37
PKP4-212ENST00000483881 MAP2K3P46734 347 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms