RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 ATF5Q9Y2D1 282 aaPredicted RBP15.93■□□□□ 0.14
SMARCC1-205ENST00000483847 SLIT3O75094 1523 aa15.93■□□□□ 0.14
SMARCC1-205ENST00000483847 TOM1L2Q6ZVM7 507 aa15.92■□□□□ 0.14
SMARCC1-205ENST00000483847 AKAP12Q02952 1782 aa15.92■□□□□ 0.14
SMARCC1-205ENST00000483847 SRPK2P78362 688 aaKnown RBP15.91■□□□□ 0.14
SMARCC1-205ENST00000483847 CABP2Q9NPB3 220 aa15.91■□□□□ 0.14
SMARCC1-205ENST00000483847 AXIN2Q9Y2T1 843 aa15.91■□□□□ 0.14
SMARCC1-205ENST00000483847 NLRP6P59044 892 aa15.9■□□□□ 0.14
SMARCC1-205ENST00000483847 NBPF1Q3BBV0 1214 aa15.9■□□□□ 0.14
SMARCC1-205ENST00000483847 FHDC1Q9C0D6 1143 aaPredicted RBP15.9■□□□□ 0.14
SMARCC1-205ENST00000483847 KIAA1210Q9ULL0 1709 aa15.9■□□□□ 0.14
SMARCC1-205ENST00000483847 PIK3C2AO00443 1686 aa15.89■□□□□ 0.13
SMARCC1-205ENST00000483847 USP6P35125 1406 aa15.89■□□□□ 0.13
SMARCC1-205ENST00000483847 TXNRD1Q16881 649 aa15.89■□□□□ 0.13
SMARCC1-205ENST00000483847 SYT17Q9BSW7 474 aa15.89■□□□□ 0.13
SMARCC1-205ENST00000483847 WDR17Q8IZU2 1322 aa15.89■□□□□ 0.13
SMARCC1-205ENST00000483847 RGPD5Q99666 1765 aa15.88■□□□□ 0.13
SMARCC1-205ENST00000483847 BCL9O00512 1426 aa15.88■□□□□ 0.13
SMARCC1-205ENST00000483847 SLC15A2Q16348 729 aa15.88■□□□□ 0.13
SMARCC1-205ENST00000483847 STK32BQ9NY57 414 aa15.88■□□□□ 0.13
SMARCC1-205ENST00000483847 CABP1Q9NZU7 370 aa15.87■□□□□ 0.13
SMARCC1-205ENST00000483847 BRD4O60885 1362 aaPredicted RBP15.87■□□□□ 0.13
SMARCC1-205ENST00000483847 SENP3-EIF4A1A0A087X0R7 540 aa15.86■□□□□ 0.13
SMARCC1-205ENST00000483847 SGIP1Q9BQI5 828 aa15.86■□□□□ 0.13
SMARCC1-205ENST00000483847 CHD4Q14839 1912 aa15.86■□□□□ 0.13
SMARCC1-205ENST00000483847 QRICH2Q9H0J4 1663 aa15.86■□□□□ 0.13
SMARCC1-205ENST00000483847 CPSF1Q10570 1443 aaKnown RBP15.85■□□□□ 0.13
SMARCC1-205ENST00000483847 CENPJQ9HC77 1338 aaPredicted RBP15.85■□□□□ 0.13
SMARCC1-205ENST00000483847 CDCA7Q9BWT1 371 aaPredicted RBP15.84■□□□□ 0.13
SMARCC1-205ENST00000483847 MTFR1LQ9H019 292 aa15.84■□□□□ 0.13
SMARCC1-205ENST00000483847 C1QTNF8P60827 252 aa15.83■□□□□ 0.12
SMARCC1-205ENST00000483847 ARHGEF25Q86VW2 580 aa15.83■□□□□ 0.12
SMARCC1-205ENST00000483847 CARD10Q9BWT7 1032 aa15.83■□□□□ 0.12
SMARCC1-205ENST00000483847 SOX12O15370 315 aa15.82■□□□□ 0.12
SMARCC1-205ENST00000483847 PAPPAQ13219 1627 aa15.82■□□□□ 0.12
SMARCC1-205ENST00000483847 NHSQ6T4R5 1651 aa15.82■□□□□ 0.12
SMARCC1-205ENST00000483847 EXOC5O00471 708 aa15.81■□□□□ 0.12
SMARCC1-205ENST00000483847 CSB-PGBD3P0DP91 1061 aa15.81■□□□□ 0.12
SMARCC1-205ENST00000483847 TNS2Q63HR2 1409 aa15.8■□□□□ 0.12
SMARCC1-205ENST00000483847 ARXQ96QS3 562 aa15.8■□□□□ 0.12
SMARCC1-205ENST00000483847 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
SMARCC1-205ENST00000483847 ACSBG1Q96GR2 724 aa15.79■□□□□ 0.12
SMARCC1-205ENST00000483847 NFAT5O94916 1531 aa15.78■□□□□ 0.12
SMARCC1-205ENST00000483847 TTC21BQ7Z4L5 1316 aa15.78■□□□□ 0.12
SMARCC1-205ENST00000483847 BTAF1O14981 1849 aa15.78■□□□□ 0.12
SMARCC1-205ENST00000483847 CCDC7Q96M83 1385 aa15.77■□□□□ 0.12
SMARCC1-205ENST00000483847 MAP3K5Q99683 1374 aa15.77■□□□□ 0.12
SMARCC1-205ENST00000483847 ZNF827Q17R98 1081 aa15.77■□□□□ 0.12
SMARCC1-205ENST00000483847 KCNH5Q8NCM2 988 aa15.77■□□□□ 0.12
SMARCC1-205ENST00000483847 ABCC6O95255 1503 aa15.76■□□□□ 0.11
SMARCC1-205ENST00000483847 GOLGB1Q14789 3259 aaKnown RBP15.76■□□□□ 0.11
SMARCC1-205ENST00000483847 CEP350Q5VT06 3117 aa15.75■□□□□ 0.11
SMARCC1-205ENST00000483847 LRRC4BQ9NT99 713 aa15.75■□□□□ 0.11
SMARCC1-205ENST00000483847 GPR162Q16538 588 aa15.74■□□□□ 0.11
SMARCC1-205ENST00000483847 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
SMARCC1-205ENST00000483847 TTC21AQ8NDW8 1320 aa15.72■□□□□ 0.11
SMARCC1-205ENST00000483847 KLHL34Q8N239 644 aa15.72■□□□□ 0.11
SMARCC1-205ENST00000483847 ZNF692Q9BU19 519 aaPredicted RBP15.72■□□□□ 0.11
SMARCC1-205ENST00000483847 IFFO2Q5TF58 517 aa15.71■□□□□ 0.11
SMARCC1-205ENST00000483847 NLRP2Q9NX02 1062 aa15.71■□□□□ 0.11
SMARCC1-205ENST00000483847 COL24A1Q17RW2 1714 aa15.71■□□□□ 0.1
SMARCC1-205ENST00000483847 SHANK3Q9BYB0 1731 aa15.71■□□□□ 0.1
SMARCC1-205ENST00000483847 ERBB3P21860 1342 aa15.7■□□□□ 0.1
SMARCC1-205ENST00000483847 GIGYF1O75420 1035 aaPredicted RBP15.7■□□□□ 0.1
SMARCC1-205ENST00000483847 PELP1Q8IZL8 1130 aaKnown RBP15.7■□□□□ 0.1
SMARCC1-205ENST00000483847 AKT1S1Q96B36 256 aa15.7■□□□□ 0.1
SMARCC1-205ENST00000483847 LTN1O94822 1766 aa15.7■□□□□ 0.1
SMARCC1-205ENST00000483847 QSER1Q2KHR3 1735 aa15.69■□□□□ 0.1
SMARCC1-205ENST00000483847 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
SMARCC1-205ENST00000483847 TUBGCP6Q96RT7 1819 aa15.69■□□□□ 0.1
SMARCC1-205ENST00000483847 IL2RBP14784 551 aa15.69■□□□□ 0.1
SMARCC1-205ENST00000483847 NLGN2Q8NFZ4 835 aa15.69■□□□□ 0.1
SMARCC1-205ENST00000483847 KTN1Q86UP2 1357 aaKnown RBP15.69■□□□□ 0.1
SMARCC1-205ENST00000483847 KAT6BQ8WYB5 2073 aa15.69■□□□□ 0.1
SMARCC1-205ENST00000483847 PNPLA7Q6ZV29 1317 aa15.68■□□□□ 0.1
SMARCC1-205ENST00000483847 KCNQ4P56696 695 aa15.67■□□□□ 0.1
SMARCC1-205ENST00000483847 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMARCC1-205ENST00000483847 USP54Q70EL1 1684 aa15.67■□□□□ 0.1
SMARCC1-205ENST00000483847 NME9Q86XW9 330 aa15.66■□□□□ 0.1
SMARCC1-205ENST00000483847 ANKRD24Q8TF21 1146 aa15.66■□□□□ 0.1
SMARCC1-205ENST00000483847 SLC16A10Q8TF71 515 aa15.66■□□□□ 0.1
SMARCC1-205ENST00000483847 USP31Q70CQ4 1352 aa15.65■□□□□ 0.1
SMARCC1-205ENST00000483847 POLD1P28340 1107 aa15.65■□□□□ 0.1
SMARCC1-205ENST00000483847 L3MBTL2Q969R5 705 aa15.65■□□□□ 0.1
SMARCC1-205ENST00000483847 YBX3P16989 372 aaKnown RBP eCLIP15.64■□□□□ 0.09
SMARCC1-205ENST00000483847 SLC27A3Q5K4L6 730 aa15.63■□□□□ 0.09
SMARCC1-205ENST00000483847 CD163L1Q9NR16 1453 aa15.63■□□□□ 0.09
SMARCC1-205ENST00000483847 SBNO2Q9Y2G9 1366 aa15.62■□□□□ 0.09
SMARCC1-205ENST00000483847 DDX54Q8TDD1 881 aaKnown RBP15.62■□□□□ 0.09
SMARCC1-205ENST00000483847 TFCP2L1Q9NZI6 479 aa15.62■□□□□ 0.09
SMARCC1-205ENST00000483847 LY75O60449 1722 aa15.61■□□□□ 0.09
SMARCC1-205ENST00000483847 DOT1LQ8TEK3 1739 aa15.61■□□□□ 0.09
SMARCC1-205ENST00000483847 ROCK2O75116 1388 aaKnown RBP15.61■□□□□ 0.09
SMARCC1-205ENST00000483847 SYTL4Q96C24 671 aaPredicted RBP15.6■□□□□ 0.09
SMARCC1-205ENST00000483847 NSD2O96028 1365 aa15.6■□□□□ 0.09
SMARCC1-205ENST00000483847 PRIM1P49642 420 aaKnown RBP15.59■□□□□ 0.09
SMARCC1-205ENST00000483847 LTV1Q96GA3 475 aaPredicted RBP15.58■□□□□ 0.08
SMARCC1-205ENST00000483847 ANKRD36BQ8N2N9 1353 aa15.58■□□□□ 0.08
SMARCC1-205ENST00000483847 ATP10DQ9P241 1426 aa15.58■□□□□ 0.08
SMARCC1-205ENST00000483847 GRIN3BO60391 1043 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms