RNA–Protein interactions for RNA: ENST00000483671.1

RFTN1-209, Transcript of raftlin, lipid raft linker 1, humanhuman

TSL 2

Gene RFTN1, Length 1,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-209ENST00000483671 APAF1O14727 1248 aa21.45■■□□□ 1.02
RFTN1-209ENST00000483671 ARHGEF25Q86VW2 580 aa21.45■■□□□ 1.02
RFTN1-209ENST00000483671 LTN1O94822 1766 aa21.45■■□□□ 1.02
RFTN1-209ENST00000483671 CRYBG1Q9Y4K1 1723 aa21.44■■□□□ 1.02
RFTN1-209ENST00000483671 IP6K1Q92551 441 aa21.44■■□□□ 1.02
RFTN1-209ENST00000483671 RSPH6AQ9H0K4 717 aa21.44■■□□□ 1.02
RFTN1-209ENST00000483671 ABCC6O95255 1503 aa21.43■■□□□ 1.02
RFTN1-209ENST00000483671 LMOD2Q6P5Q4 547 aa21.43■■□□□ 1.02
RFTN1-209ENST00000483671 ROBO1Q9Y6N7 1651 aa21.42■■□□□ 1.02
RFTN1-209ENST00000483671 PHF23Q9BUL5 403 aaPredicted RBP21.42■■□□□ 1.02
RFTN1-209ENST00000483671 CCDC27Q2M243 656 aa21.41■■□□□ 1.02
RFTN1-209ENST00000483671 TCP11L2Q8N4U5 519 aa21.41■■□□□ 1.02
RFTN1-209ENST00000483671 CPDO75976 1380 aa21.4■■□□□ 1.02
RFTN1-209ENST00000483671 KDRP35968 1356 aa21.4■■□□□ 1.02
RFTN1-209ENST00000483671 IGSF1Q8N6C5 1336 aa21.39■■□□□ 1.01
RFTN1-209ENST00000483671 MAPK8IP3Q9UPT6 1336 aa21.38■■□□□ 1.01
RFTN1-209ENST00000483671 PRKAR2BP31323 418 aa21.37■■□□□ 1.01
RFTN1-209ENST00000483671 TOM1O60784 492 aa21.36■■□□□ 1.01
RFTN1-209ENST00000483671 SENP3-EIF4A1A0A087X0R7 540 aa21.35■■□□□ 1.01
RFTN1-209ENST00000483671 SALL2Q9Y467 1007 aaPredicted RBP21.35■■□□□ 1.01
RFTN1-209ENST00000483671 HMOX1P09601 288 aa21.34■■□□□ 1.01
RFTN1-209ENST00000483671 TMPOP42166 694 aaKnown RBP21.34■■□□□ 1.01
RFTN1-209ENST00000483671 WWC1Q8IX03 1113 aa21.34■■□□□ 1.01
RFTN1-209ENST00000483671 NCAPD2Q15021 1401 aa21.33■■□□□ 1.01
RFTN1-209ENST00000483671 NEFMP07197 916 aa21.33■■□□□ 1.01
RFTN1-209ENST00000483671 GOLGA2Q08379 1002 aa21.33■■□□□ 1.01
RFTN1-209ENST00000483671 SULT6B1Q6IMI4 303 aa21.33■■□□□ 1.01
RFTN1-209ENST00000483671 EYA1Q99502 592 aa21.33■■□□□ 1.01
RFTN1-209ENST00000483671 COL18A1P39060 1754 aa21.33■■□□□ 1.01
RFTN1-209ENST00000483671 LRRC59Q96AG4 307 aaKnown RBP21.32■■□□□ 1
RFTN1-209ENST00000483671 ABCA3Q99758 1704 aa21.32■■□□□ 1
RFTN1-209ENST00000483671 WDR63Q8IWG1 891 aa21.31■■□□□ 1
RFTN1-209ENST00000483671 COL22A1Q8NFW1 1626 aaPredicted RBP21.31■■□□□ 1
RFTN1-209ENST00000483671 NFE2L2Q16236 605 aa21.3■■□□□ 1
RFTN1-209ENST00000483671 AEBP1Q8IUX7 1158 aa21.3■■□□□ 1
RFTN1-209ENST00000483671 TRMT2AQ8IZ69 625 aaKnown RBP21.3■■□□□ 1
RFTN1-209ENST00000483671 CAMTA1Q9Y6Y1 1673 aa21.3■■□□□ 1
RFTN1-209ENST00000483671 CABLES1Q8TDN4 633 aa21.29■■□□□ 1
RFTN1-209ENST00000483671 CDCA7LQ96GN5 454 aa21.29■■□□□ 1
RFTN1-209ENST00000483671 PHACTR3Q96KR7 559 aa21.29■■□□□ 1
RFTN1-209ENST00000483671 ZC3H6P61129 1189 aaKnown RBP21.29■■□□□ 1
RFTN1-209ENST00000483671 SLFN5Q08AF3 891 aa21.29■■□□□ 1
RFTN1-209ENST00000483671 RRP7AQ9Y3A4 280 aaKnown RBP21.29■■□□□ 1
RFTN1-209ENST00000483671 COL16A1Q07092 1604 aaPredicted RBP21.28■■□□□ 1
RFTN1-209ENST00000483671 KIAA0232Q92628 1395 aa21.28■■□□□ 1
RFTN1-209ENST00000483671 E9PSI1 815 aa21.28■■□□□ 1
RFTN1-209ENST00000483671 TRIM35Q9UPQ4 493 aa21.28■■□□□ 1
RFTN1-209ENST00000483671 AXIN2Q9Y2T1 843 aa21.28■■□□□ 1
RFTN1-209ENST00000483671 LMO7Q8WWI1 1683 aa21.27■■□□□ 1
RFTN1-209ENST00000483671 ERBB3P21860 1342 aa21.27■■□□□ 1
RFTN1-209ENST00000483671 RIPK4P57078 832 aa21.27■□□□□ 0.99
RFTN1-209ENST00000483671 DUSP27Q5VZP5 1158 aa21.26■□□□□ 0.99
RFTN1-209ENST00000483671 ANKRD24Q8TF21 1146 aa21.26■□□□□ 0.99
RFTN1-209ENST00000483671 PHLPP1O60346 1717 aa21.25■□□□□ 0.99
RFTN1-209ENST00000483671 IL16Q14005 1332 aa21.25■□□□□ 0.99
RFTN1-209ENST00000483671 LMOD3Q0VAK6 560 aa21.25■□□□□ 0.99
RFTN1-209ENST00000483671 NEUROD2Q15784 382 aa21.25■□□□□ 0.99
RFTN1-209ENST00000483671 CERKQ8TCT0 537 aa21.25■□□□□ 0.99
RFTN1-209ENST00000483671 LTV1Q96GA3 475 aaPredicted RBP21.25■□□□□ 0.99
RFTN1-209ENST00000483671 FAM208AQ9UK61 1670 aaKnown RBP21.24■□□□□ 0.99
RFTN1-209ENST00000483671 ZBTB7CA1YPR0 619 aa21.24■□□□□ 0.99
RFTN1-209ENST00000483671 UBAP1LF5GYI3 381 aa21.24■□□□□ 0.99
RFTN1-209ENST00000483671 NBPF6Q5VWK0 638 aa21.24■□□□□ 0.99
RFTN1-209ENST00000483671 NBPF4Q96M43 638 aa21.24■□□□□ 0.99
RFTN1-209ENST00000483671 PLEKHG2Q9H7P9 1386 aa21.24■□□□□ 0.99
RFTN1-209ENST00000483671 PLEKHG5O94827 1062 aa21.23■□□□□ 0.99
RFTN1-209ENST00000483671 SPINK5Q9NQ38 1064 aaPredicted RBP21.22■□□□□ 0.99
RFTN1-209ENST00000483671 RGPD5Q99666 1765 aa21.21■□□□□ 0.99
RFTN1-209ENST00000483671 PRDM11Q9NQV5 511 aa21.21■□□□□ 0.99
RFTN1-209ENST00000483671 CALD1Q05682 793 aaKnown RBP21.2■□□□□ 0.98
RFTN1-209ENST00000483671 GAS2L2Q8NHY3 880 aa21.2■□□□□ 0.98
RFTN1-209ENST00000483671 HAP1P54257 671 aaPredicted RBP21.19■□□□□ 0.98
RFTN1-209ENST00000483671 RNF123Q5XPI4 1314 aa21.19■□□□□ 0.98
RFTN1-209ENST00000483671 RGPD2P0DJD1 1756 aa21.19■□□□□ 0.98
RFTN1-209ENST00000483671 DLG5Q8TDM6 1919 aa21.19■□□□□ 0.98
RFTN1-209ENST00000483671 CHRNA2Q15822 529 aa21.18■□□□□ 0.98
RFTN1-209ENST00000483671 MYH16Q9H6N6 1097 aa21.18■□□□□ 0.98
RFTN1-209ENST00000483671 PIP4K2BP78356 416 aa21.17■□□□□ 0.98
RFTN1-209ENST00000483671 COL5A2P05997 1499 aaPredicted RBP21.16■□□□□ 0.98
RFTN1-209ENST00000483671 HTATSF1O43719 755 aaKnown RBP21.16■□□□□ 0.98
RFTN1-209ENST00000483671 MTHFSDQ2M296 383 aaKnown RBP21.16■□□□□ 0.98
RFTN1-209ENST00000483671 USHBP1Q8N6Y0 703 aa21.15■□□□□ 0.98
RFTN1-209ENST00000483671 RCAN3Q9UKA8 241 aa21.15■□□□□ 0.98
RFTN1-209ENST00000483671 SUPT16HQ9Y5B9 1047 aaKnown RBP21.15■□□□□ 0.98
RFTN1-209ENST00000483671 COL14A1Q05707 1796 aaKnown RBP21.14■□□□□ 0.98
RFTN1-209ENST00000483671 GTF3C3Q9Y5Q9 886 aa21.14■□□□□ 0.97
RFTN1-209ENST00000483671 WDR17Q8IZU2 1322 aa21.14■□□□□ 0.97
RFTN1-209ENST00000483671 FAM83GA6ND36 823 aa21.13■□□□□ 0.97
RFTN1-209ENST00000483671 AMOTQ4VCS5 1084 aa21.13■□□□□ 0.97
RFTN1-209ENST00000483671 IFT57Q9NWB7 429 aa21.12■□□□□ 0.97
RFTN1-209ENST00000483671 ZNF853P0CG23 659 aa21.11■□□□□ 0.97
RFTN1-209ENST00000483671 NLRP2Q9NX02 1062 aa21.11■□□□□ 0.97
RFTN1-209ENST00000483671 CT47B1P0C2W7 299 aaPredicted RBP21.1■□□□□ 0.97
RFTN1-209ENST00000483671 CSB-PGBD3P0DP91 1061 aa21.1■□□□□ 0.97
RFTN1-209ENST00000483671 PLEKHO1Q53GL0 409 aaPredicted RBP21.1■□□□□ 0.97
RFTN1-209ENST00000483671 MAP3K5Q99683 1374 aa21.1■□□□□ 0.97
RFTN1-209ENST00000483671 FANCIQ9NVI1 1328 aa21.1■□□□□ 0.97
RFTN1-209ENST00000483671 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.1■□□□□ 0.97
RFTN1-209ENST00000483671 LRRC37A3O60309 1634 aa21.09■□□□□ 0.97
RFTN1-209ENST00000483671 GNAI1P63096 354 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms