RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 WDR17Q8IZU2 1322 aa28.01■■■□□ 2.07
HPS4-213ENST00000483631 TMC1Q8TDI8 760 aa28.01■■■□□ 2.07
HPS4-213ENST00000483631 ZBTB7CA1YPR0 619 aa28■■■□□ 2.07
HPS4-213ENST00000483631 RGPD5Q99666 1765 aa27.99■■■□□ 2.07
HPS4-213ENST00000483631 ST20-MTHFSA0A0A6YYL1 179 aa27.99■■■□□ 2.07
HPS4-213ENST00000483631 SLC12A5Q9H2X9 1139 aa27.99■■■□□ 2.07
HPS4-213ENST00000483631 AXIN2Q9Y2T1 843 aa27.99■■■□□ 2.07
HPS4-213ENST00000483631 CLSPNQ9HAW4 1339 aa27.98■■■□□ 2.07
HPS4-213ENST00000483631 WNK3Q9BYP7 1800 aa27.98■■■□□ 2.07
HPS4-213ENST00000483631 TOM1L2Q6ZVM7 507 aa27.98■■■□□ 2.07
HPS4-213ENST00000483631 TIMELESSQ9UNS1 1208 aa27.98■■■□□ 2.07
HPS4-213ENST00000483631 PARD3Q8TEW0 1356 aa27.98■■■□□ 2.07
HPS4-213ENST00000483631 CDCA7Q9BWT1 371 aaPredicted RBP27.97■■■□□ 2.07
HPS4-213ENST00000483631 A0A1W2PP64 1363 aa27.97■■■□□ 2.07
HPS4-213ENST00000483631 EN1Q05925 392 aaPredicted RBP27.96■■■□□ 2.07
HPS4-213ENST00000483631 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.96■■■□□ 2.07
HPS4-213ENST00000483631 LRRC37A3O60309 1634 aa27.95■■■□□ 2.06
HPS4-213ENST00000483631 TRIM37O94972 964 aa27.94■■■□□ 2.06
HPS4-213ENST00000483631 NME9Q86XW9 330 aa27.93■■■□□ 2.06
HPS4-213ENST00000483631 CARD10Q9BWT7 1032 aa27.93■■■□□ 2.06
HPS4-213ENST00000483631 PEAK1Q9H792 1746 aa27.92■■■□□ 2.06
HPS4-213ENST00000483631 SRCAPQ6ZRS2 3230 aa27.92■■■□□ 2.06
HPS4-213ENST00000483631 OVOS2A0A0G2JMS6 1433 aa27.92■■■□□ 2.06
HPS4-213ENST00000483631 OVOS2A0A0J9YW53 1432 aa27.92■■■□□ 2.06
HPS4-213ENST00000483631 OVOS2Q6IE36 1432 aa27.92■■■□□ 2.06
HPS4-213ENST00000483631 LTN1O94822 1766 aa27.91■■■□□ 2.06
HPS4-213ENST00000483631 SOX12O15370 315 aa27.91■■■□□ 2.06
HPS4-213ENST00000483631 CAMKK2Q96RR4 588 aa27.91■■■□□ 2.06
HPS4-213ENST00000483631 USP47Q96K76 1375 aa27.9■■■□□ 2.06
HPS4-213ENST00000483631 CCDC7Q96M83 1385 aa27.9■■■□□ 2.06
HPS4-213ENST00000483631 DDB1Q16531 1140 aa27.9■■■□□ 2.06
HPS4-213ENST00000483631 CSB-PGBD3P0DP91 1061 aa27.89■■■□□ 2.06
HPS4-213ENST00000483631 BCL9O00512 1426 aa27.88■■■□□ 2.05
HPS4-213ENST00000483631 APBA3O96018 575 aa27.88■■■□□ 2.05
HPS4-213ENST00000483631 LRP5O75197 1615 aa27.88■■■□□ 2.05
HPS4-213ENST00000483631 SBF2Q86WG5 1849 aa27.88■■■□□ 2.05
HPS4-213ENST00000483631 TMF1P82094 1093 aa27.87■■■□□ 2.05
HPS4-213ENST00000483631 EZH2Q15910 746 aaKnown RBP27.87■■■□□ 2.05
HPS4-213ENST00000483631 RREB1Q92766 1687 aa27.87■■■□□ 2.05
HPS4-213ENST00000483631 ANKRD36BQ8N2N9 1353 aa27.86■■■□□ 2.05
HPS4-213ENST00000483631 ERBB3P21860 1342 aa27.85■■■□□ 2.05
HPS4-213ENST00000483631 RGPD3A6NKT7 1758 aaPredicted RBP27.84■■■□□ 2.05
HPS4-213ENST00000483631 RGPD4Q7Z3J3 1758 aa27.84■■■□□ 2.05
HPS4-213ENST00000483631 CDCA8Q53HL2 280 aa27.83■■■□□ 2.05
HPS4-213ENST00000483631 NUP188Q5SRE5 1749 aa27.79■■■□□ 2.04
HPS4-213ENST00000483631 PSDA5PKW4 1024 aaPredicted RBP27.79■■■□□ 2.04
HPS4-213ENST00000483631 FAM208AQ9UK61 1670 aaKnown RBP27.78■■■□□ 2.04
HPS4-213ENST00000483631 EXOC5O00471 708 aa27.78■■■□□ 2.04
HPS4-213ENST00000483631 MARCH10Q8NA82 808 aaPredicted RBP27.78■■■□□ 2.04
HPS4-213ENST00000483631 COG3Q96JB2 828 aa27.78■■■□□ 2.04
HPS4-213ENST00000483631 TNS2Q63HR2 1409 aa27.77■■■□□ 2.04
HPS4-213ENST00000483631 PLSCR1O15162 318 aa27.76■■■□□ 2.03
HPS4-213ENST00000483631 IP6K1Q92551 441 aa27.76■■■□□ 2.03
HPS4-213ENST00000483631 BCL11BQ9C0K0 894 aaPredicted RBP27.76■■■□□ 2.03
HPS4-213ENST00000483631 R3HDM1Q15032 1099 aaKnown RBP27.75■■■□□ 2.03
HPS4-213ENST00000483631 ANKRD24Q8TF21 1146 aa27.75■■■□□ 2.03
HPS4-213ENST00000483631 PCGF6Q9BYE7 350 aa27.74■■■□□ 2.03
HPS4-213ENST00000483631 NLRP2Q9NX02 1062 aa27.74■■■□□ 2.03
HPS4-213ENST00000483631 NBPF14Q5TI25 921 aa27.73■■■□□ 2.03
HPS4-213ENST00000483631 IL2RBP14784 551 aa27.71■■■□□ 2.03
HPS4-213ENST00000483631 RTL1A6NKG5 1358 aa27.69■■■□□ 2.02
HPS4-213ENST00000483631 MAP3K19Q56UN5 1328 aa27.68■■■□□ 2.02
HPS4-213ENST00000483631 FYB1O15117 783 aa27.68■■■□□ 2.02
HPS4-213ENST00000483631 KIF20BQ96Q89 1820 aa27.68■■■□□ 2.02
HPS4-213ENST00000483631 MYOM1P52179 1685 aa27.67■■■□□ 2.02
HPS4-213ENST00000483631 NHSQ6T4R5 1651 aa27.65■■■□□ 2.02
HPS4-213ENST00000483631 HOXC9P31274 260 aa27.65■■■□□ 2.02
HPS4-213ENST00000483631 AMPHP49418 695 aa27.64■■■□□ 2.02
HPS4-213ENST00000483631 KIF24Q5T7B8 1368 aa27.61■■■□□ 2.01
HPS4-213ENST00000483631 PTF1AQ7RTS3 328 aa27.61■■■□□ 2.01
HPS4-213ENST00000483631 GGNBP2Q9H3C7 697 aa27.61■■■□□ 2.01
HPS4-213ENST00000483631 KAT6BQ8WYB5 2073 aa27.58■■■□□ 2.01
HPS4-213ENST00000483631 LTV1Q96GA3 475 aaPredicted RBP27.58■■■□□ 2.01
HPS4-213ENST00000483631 PROM2Q8N271 834 aa27.57■■■□□ 2
HPS4-213ENST00000483631 RGPD2P0DJD1 1756 aa27.56■■■□□ 2
HPS4-213ENST00000483631 FBLN1P23142 703 aa27.56■■■□□ 2
HPS4-213ENST00000483631 CARD14Q9BXL6 1004 aa27.56■■■□□ 2
HPS4-213ENST00000483631 NSD3Q9BZ95 1437 aa27.56■■■□□ 2
HPS4-213ENST00000483631 RRS1Q15050 365 aaKnown RBP27.55■■■□□ 2
HPS4-213ENST00000483631 CCER1Q8TC90 406 aaPredicted RBP27.55■■■□□ 2
HPS4-213ENST00000483631 SMG6Q86US8 1419 aaKnown RBP27.55■■■□□ 2
HPS4-213ENST00000483631 INSRP06213 1382 aa27.54■■■□□ 2
HPS4-213ENST00000483631 TXNRD1Q16881 649 aa27.54■■■□□ 2
HPS4-213ENST00000483631 BTAF1O14981 1849 aa27.53■■■□□ 2
HPS4-213ENST00000483631 FLT4P35916 1363 aa27.53■■■□□ 2
HPS4-213ENST00000483631 CGNL1Q0VF96 1302 aa27.53■■■□□ 2
HPS4-213ENST00000483631 KCNQ2O43526 872 aa27.53■■■□□ 2
HPS4-213ENST00000483631 EIF4G2P78344 907 aaKnown RBP eCLIP27.53■■■□□ 2
HPS4-213ENST00000483631 ACSBG1Q96GR2 724 aa27.5■■□□□ 1.99
HPS4-213ENST00000483631 ANO8Q9HCE9 1232 aaPredicted RBP27.5■■□□□ 1.99
HPS4-213ENST00000483631 CASZ1Q86V15 1759 aa27.5■■□□□ 1.99
HPS4-213ENST00000483631 SHANK3Q9BYB0 1731 aa27.5■■□□□ 1.99
HPS4-213ENST00000483631 SPON1Q9HCB6 807 aa27.49■■□□□ 1.99
HPS4-213ENST00000483631 ANKRD26Q9UPS8 1709 aa27.49■■□□□ 1.99
HPS4-213ENST00000483631 MEGF6O75095 1541 aa27.48■■□□□ 1.99
HPS4-213ENST00000483631 NBPF6Q5VWK0 638 aa27.48■■□□□ 1.99
HPS4-213ENST00000483631 NBPF4Q96M43 638 aa27.48■■□□□ 1.99
HPS4-213ENST00000483631 ZCRB1Q8TBF4 217 aaKnown RBP27.47■■□□□ 1.99
HPS4-213ENST00000483631 DDX54Q8TDD1 881 aaKnown RBP27.47■■□□□ 1.99
HPS4-213ENST00000483631 STK32BQ9NY57 414 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms