RNA–Protein interactions for RNA: ENST00000483159.1

MRPL55-229, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 5

Gene MRPL55, Length 790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-229ENST00000483159 POLR3GLQ9BT43 218 aa17.09■□□□□ 0.33
MRPL55-229ENST00000483159 ABCC6O95255 1503 aa17.08■□□□□ 0.32
MRPL55-229ENST00000483159 C11orf95C9JLR9 678 aaPredicted RBP17.08■□□□□ 0.32
MRPL55-229ENST00000483159 TCP11L2Q8N4U5 519 aa17.08■□□□□ 0.32
MRPL55-229ENST00000483159 CRB1P82279 1406 aa17.07■□□□□ 0.32
MRPL55-229ENST00000483159 WDR17Q8IZU2 1322 aa17.07■□□□□ 0.32
MRPL55-229ENST00000483159 A0A0G2JS52 829 aa17.07■□□□□ 0.32
MRPL55-229ENST00000483159 MYT1Q01538 1121 aa17.07■□□□□ 0.32
MRPL55-229ENST00000483159 KRT27Q7Z3Y8 459 aa17.07■□□□□ 0.32
MRPL55-229ENST00000483159 GGNBP2Q9H3C7 697 aa17.07■□□□□ 0.32
MRPL55-229ENST00000483159 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
MRPL55-229ENST00000483159 CCDC125Q86Z20 511 aa17.06■□□□□ 0.32
MRPL55-229ENST00000483159 USP35Q9P2H5 1018 aa17.06■□□□□ 0.32
MRPL55-229ENST00000483159 NSD3Q9BZ95 1437 aa17.05■□□□□ 0.32
MRPL55-229ENST00000483159 TOM1L2Q6ZVM7 507 aa17.05■□□□□ 0.32
MRPL55-229ENST00000483159 PANK3Q9H999 370 aa17.05■□□□□ 0.32
MRPL55-229ENST00000483159 COL18A1P39060 1754 aa17.05■□□□□ 0.32
MRPL55-229ENST00000483159 MYOM1P52179 1685 aa17.04■□□□□ 0.32
MRPL55-229ENST00000483159 IP6K1Q92551 441 aa17.04■□□□□ 0.32
MRPL55-229ENST00000483159 KIF7Q2M1P5 1343 aa17.03■□□□□ 0.32
MRPL55-229ENST00000483159 CSB-PGBD3P0DP91 1061 aa17.03■□□□□ 0.32
MRPL55-229ENST00000483159 CARD10Q9BWT7 1032 aa17.03■□□□□ 0.32
MRPL55-229ENST00000483159 MAP3K19Q56UN5 1328 aa17.02■□□□□ 0.32
MRPL55-229ENST00000483159 CDCA7Q9BWT1 371 aaPredicted RBP17.02■□□□□ 0.32
MRPL55-229ENST00000483159 BLMP54132 1417 aaPredicted RBP17.02■□□□□ 0.31
MRPL55-229ENST00000483159 ERBB3P21860 1342 aa17.01■□□□□ 0.31
MRPL55-229ENST00000483159 AMPHP49418 695 aa17■□□□□ 0.31
MRPL55-229ENST00000483159 ANKRD24Q8TF21 1146 aa17■□□□□ 0.31
MRPL55-229ENST00000483159 THSD7AQ9UPZ6 1657 aa17■□□□□ 0.31
MRPL55-229ENST00000483159 CCDC7Q96M83 1385 aa17■□□□□ 0.31
MRPL55-229ENST00000483159 FBLN1P23142 703 aa16.99■□□□□ 0.31
MRPL55-229ENST00000483159 HOXC9P31274 260 aa16.99■□□□□ 0.31
MRPL55-229ENST00000483159 RTL1A6NKG5 1358 aa16.99■□□□□ 0.31
MRPL55-229ENST00000483159 KIF24Q5T7B8 1368 aa16.99■□□□□ 0.31
MRPL55-229ENST00000483159 PDE3BQ13370 1112 aa16.98■□□□□ 0.31
MRPL55-229ENST00000483159 RRS1Q15050 365 aaKnown RBP16.97■□□□□ 0.31
MRPL55-229ENST00000483159 NLRP2Q9NX02 1062 aa16.97■□□□□ 0.31
MRPL55-229ENST00000483159 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
MRPL55-229ENST00000483159 NSD2O96028 1365 aa16.97■□□□□ 0.31
MRPL55-229ENST00000483159 EP400Q96L91 3159 aa16.96■□□□□ 0.31
MRPL55-229ENST00000483159 FAM196AQ6ZSG2 479 aa16.96■□□□□ 0.31
MRPL55-229ENST00000483159 DDB1Q16531 1140 aa16.95■□□□□ 0.3
MRPL55-229ENST00000483159 WASHC2AQ641Q2 1341 aa16.95■□□□□ 0.3
MRPL55-229ENST00000483159 BRWD3Q6RI45 1802 aa16.94■□□□□ 0.3
MRPL55-229ENST00000483159 LTN1O94822 1766 aa16.94■□□□□ 0.3
MRPL55-229ENST00000483159 KIF20BQ96Q89 1820 aa16.93■□□□□ 0.3
MRPL55-229ENST00000483159 INSRP06213 1382 aa16.93■□□□□ 0.3
MRPL55-229ENST00000483159 FLT4P35916 1363 aa16.93■□□□□ 0.3
MRPL55-229ENST00000483159 EXOC5O00471 708 aa16.93■□□□□ 0.3
MRPL55-229ENST00000483159 SF3B2Q13435 895 aaKnown RBP16.93■□□□□ 0.3
MRPL55-229ENST00000483159 LTV1Q96GA3 475 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-229ENST00000483159 PER1O15534 1290 aaPredicted RBP16.92■□□□□ 0.3
MRPL55-229ENST00000483159 IL2RBP14784 551 aa16.92■□□□□ 0.3
MRPL55-229ENST00000483159 HSP90AB2PQ58FF8 381 aa16.92■□□□□ 0.3
MRPL55-229ENST00000483159 FAM182BQ5T319 152 aa16.92■□□□□ 0.3
MRPL55-229ENST00000483159 DISP2A7MBM2 1401 aa16.92■□□□□ 0.3
MRPL55-229ENST00000483159 AMER1Q5JTC6 1135 aaPredicted RBP16.91■□□□□ 0.3
MRPL55-229ENST00000483159 POLKQ9UBT6 870 aa16.91■□□□□ 0.3
MRPL55-229ENST00000483159 RGPD5Q99666 1765 aa16.91■□□□□ 0.3
MRPL55-229ENST00000483159 SMG6Q86US8 1419 aaKnown RBP16.9■□□□□ 0.3
MRPL55-229ENST00000483159 MORC1Q86VD1 984 aa16.9■□□□□ 0.3
MRPL55-229ENST00000483159 EMILIN1Q9Y6C2 1016 aa16.9■□□□□ 0.3
MRPL55-229ENST00000483159 PARP4Q9UKK3 1724 aaKnown RBP16.9■□□□□ 0.3
MRPL55-229ENST00000483159 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
MRPL55-229ENST00000483159 PPM1GO15355 546 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-229ENST00000483159 TNNT2P45379 298 aaPredicted RBP16.88■□□□□ 0.29
MRPL55-229ENST00000483159 NBPF6Q5VWK0 638 aa16.88■□□□□ 0.29
MRPL55-229ENST00000483159 NBPF4Q96M43 638 aa16.88■□□□□ 0.29
MRPL55-229ENST00000483159 MARCH10Q8NA82 808 aaPredicted RBP16.87■□□□□ 0.29
MRPL55-229ENST00000483159 OVOS2A0A0G2JMS6 1433 aa16.87■□□□□ 0.29
MRPL55-229ENST00000483159 BCL9O00512 1426 aa16.87■□□□□ 0.29
MRPL55-229ENST00000483159 TRIM37O94972 964 aa16.86■□□□□ 0.29
MRPL55-229ENST00000483159 ZEB1P37275 1124 aaPredicted RBP16.86■□□□□ 0.29
MRPL55-229ENST00000483159 BAG6P46379 1132 aa16.86■□□□□ 0.29
MRPL55-229ENST00000483159 NPC1L1Q9UHC9 1359 aa16.86■□□□□ 0.29
MRPL55-229ENST00000483159 FAM208AQ9UK61 1670 aaKnown RBP16.85■□□□□ 0.29
MRPL55-229ENST00000483159 TNS2Q63HR2 1409 aa16.85■□□□□ 0.29
MRPL55-229ENST00000483159 LRRC37A3O60309 1634 aa16.85■□□□□ 0.29
MRPL55-229ENST00000483159 DEFB132Q7Z7B7 95 aa16.84■□□□□ 0.29
MRPL55-229ENST00000483159 RAPGEF4Q8WZA2 1011 aa16.83■□□□□ 0.28
MRPL55-229ENST00000483159 PEAK1Q9H792 1746 aa16.83■□□□□ 0.28
MRPL55-229ENST00000483159 ANKRD26Q9UPS8 1709 aa16.83■□□□□ 0.28
MRPL55-229ENST00000483159 APBA3O96018 575 aa16.81■□□□□ 0.28
MRPL55-229ENST00000483159 ZCRB1Q8TBF4 217 aaKnown RBP16.81■□□□□ 0.28
MRPL55-229ENST00000483159 BCL11BQ9C0K0 894 aaPredicted RBP16.81■□□□□ 0.28
MRPL55-229ENST00000483159 WNK3Q9BYP7 1800 aa16.81■□□□□ 0.28
MRPL55-229ENST00000483159 TATP17735 454 aaPredicted RBP16.8■□□□□ 0.28
MRPL55-229ENST00000483159 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
MRPL55-229ENST00000483159 CC2D1BQ5T0F9 858 aaKnown RBP16.8■□□□□ 0.28
MRPL55-229ENST00000483159 USHBP1Q8N6Y0 703 aa16.8■□□□□ 0.28
MRPL55-229ENST00000483159 EYA1Q99502 592 aa16.8■□□□□ 0.28
MRPL55-229ENST00000483159 PARD3Q8TEW0 1356 aa16.79■□□□□ 0.28
MRPL55-229ENST00000483159 EN1Q05925 392 aaPredicted RBP16.79■□□□□ 0.28
MRPL55-229ENST00000483159 RGPD1P0DJD0 1748 aa16.79■□□□□ 0.28
MRPL55-229ENST00000483159 NCAPD2Q15021 1401 aa16.79■□□□□ 0.28
MRPL55-229ENST00000483159 DDX54Q8TDD1 881 aaKnown RBP16.78■□□□□ 0.28
MRPL55-229ENST00000483159 CAMKK2Q96RR4 588 aa16.78■□□□□ 0.28
MRPL55-229ENST00000483159 MEGF6O75095 1541 aa16.77■□□□□ 0.28
MRPL55-229ENST00000483159 PLSCR1O15162 318 aa16.77■□□□□ 0.28
MRPL55-229ENST00000483159 MAP2P11137 1827 aaKnown RBP16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms