RNA–Protein interactions for RNA: ENST00000483031.1

RPA3-207, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 641 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-207ENST00000483031 PPP1R26Q5T8A7 1209 aaPredicted RBP8.95□□□□□ -0.98
RPA3-207ENST00000483031 KRTAP4-6Q9BYQ5 205 aa8.95□□□□□ -0.98
RPA3-207ENST00000483031 FIGNL2A6NMB9 653 aa8.94□□□□□ -0.98
RPA3-207ENST00000483031 RNF225M0QZC1 329 aaPredicted RBP8.94□□□□□ -0.98
RPA3-207ENST00000483031 KRT76Q01546 638 aa8.94□□□□□ -0.98
RPA3-207ENST00000483031 GPR161Q8N6U8 529 aaKnown RBP8.94□□□□□ -0.98
RPA3-207ENST00000483031 SPINT1O43278 529 aa8.93□□□□□ -0.98
RPA3-207ENST00000483031 Q6ZVU0 165 aa8.93□□□□□ -0.98
RPA3-207ENST00000483031 TMEM151AQ8N4L1 468 aa8.93□□□□□ -0.98
RPA3-207ENST00000483031 KCTD17Q8N5Z5 321 aa8.93□□□□□ -0.98
RPA3-207ENST00000483031 SLC10A4Q96EP9 437 aa8.93□□□□□ -0.98
RPA3-207ENST00000483031 CDV3Q9UKY7 258 aaKnown RBP8.93□□□□□ -0.98
RPA3-207ENST00000483031 GSK3AP49840 483 aa8.92□□□□□ -0.98
RPA3-207ENST00000483031 CBLBQ13191 982 aa8.92□□□□□ -0.98
RPA3-207ENST00000483031 PDXDC2PQ6P474 469 aa8.92□□□□□ -0.98
RPA3-207ENST00000483031 CCDC155Q8N6L0 562 aa8.92□□□□□ -0.98
RPA3-207ENST00000483031 NANOS1Q8WY41 292 aaKnown RBP8.92□□□□□ -0.98
RPA3-207ENST00000483031 ARHGAP9Q9BRR9 750 aa8.92□□□□□ -0.98
RPA3-207ENST00000483031 COL25A1Q9BXS0 654 aaPredicted RBP8.92□□□□□ -0.98
RPA3-207ENST00000483031 RSPH6AQ9H0K4 717 aa8.92□□□□□ -0.98
RPA3-207ENST00000483031 DHX9Q08211 1270 aaKnown RBP8.91□□□□□ -0.98
RPA3-207ENST00000483031 ADAMTS8Q9UP79 889 aa8.91□□□□□ -0.98
RPA3-207ENST00000483031 GDF11O95390 407 aa8.9□□□□□ -0.98
RPA3-207ENST00000483031 RASSF7Q02833 373 aa8.9□□□□□ -0.98
RPA3-207ENST00000483031 SUZ12Q15022 739 aaKnown RBP8.9□□□□□ -0.98
RPA3-207ENST00000483031 KCTD15Q96SI1 283 aaPredicted RBP8.9□□□□□ -0.98
RPA3-207ENST00000483031 CTDSPL2Q05D32 466 aa8.89□□□□□ -0.99
RPA3-207ENST00000483031 ZBTB33Q86T24 672 aa8.89□□□□□ -0.99
RPA3-207ENST00000483031 POLR3EQ9NVU0 708 aa8.89□□□□□ -0.99
RPA3-207ENST00000483031 FKBPLQ9UIM3 349 aa8.89□□□□□ -0.99
RPA3-207ENST00000483031 SLC35F4A4IF30 521 aa8.88□□□□□ -0.99
RPA3-207ENST00000483031 SVOPQ8N4V2 548 aa8.88□□□□□ -0.99
RPA3-207ENST00000483031 ZC3H4Q9UPT8 1303 aaKnown RBP8.87□□□□□ -0.99
RPA3-207ENST00000483031 ITGA6P23229 1130 aa8.87□□□□□ -0.99
RPA3-207ENST00000483031 CDC14CA4D256 554 aa8.86□□□□□ -0.99
RPA3-207ENST00000483031 RNFT1Q5M7Z0 435 aa8.86□□□□□ -0.99
RPA3-207ENST00000483031 ZNF385CQ66K41 422 aaPredicted RBP8.86□□□□□ -0.99
RPA3-207ENST00000483031 SV2AQ7L0J3 742 aa8.86□□□□□ -0.99
RPA3-207ENST00000483031 CTSOP43234 321 aaPredicted RBP8.85□□□□□ -0.99
RPA3-207ENST00000483031 RELBQ01201 579 aa8.85□□□□□ -0.99
RPA3-207ENST00000483031 INTS6LQ5JSJ4 861 aaKnown RBP8.85□□□□□ -0.99
RPA3-207ENST00000483031 VWA5B2Q8N398 1253 aa8.85□□□□□ -0.99
RPA3-207ENST00000483031 LRRN4Q8WUT4 740 aa8.85□□□□□ -0.99
RPA3-207ENST00000483031 AGBL1Q96MI9 1066 aa8.85□□□□□ -0.99
RPA3-207ENST00000483031 POLMQ9NP87 494 aaPredicted RBP8.85□□□□□ -0.99
RPA3-207ENST00000483031 SLURP2P0DP57 97 aa8.84□□□□□ -0.99
RPA3-207ENST00000483031 PTK2Q05397 1052 aa8.84□□□□□ -0.99
RPA3-207ENST00000483031 INSM2Q96T92 566 aaPredicted RBP8.84□□□□□ -0.99
RPA3-207ENST00000483031 SLC24A3Q9HC58 644 aa8.84□□□□□ -0.99
RPA3-207ENST00000483031 NR6A1Q15406 480 aa8.83□□□□□ -1
RPA3-207ENST00000483031 GPSM3Q9Y4H4 160 aa8.83□□□□□ -1
RPA3-207ENST00000483031 NBPF20Q3BBV1 942 aa8.82□□□□□ -1
RPA3-207ENST00000483031 RNF217Q8TC41 542 aa8.82□□□□□ -1
RPA3-207ENST00000483031 WHAMMQ8TF30 809 aa8.81□□□□□ -1
RPA3-207ENST00000483031 ZNF395Q9H8N7 513 aaPredicted RBP8.81□□□□□ -1
RPA3-207ENST00000483031 MARSP56192 900 aaKnown RBP8.8□□□□□ -1
RPA3-207ENST00000483031 PNMA1Q8ND90 353 aa8.8□□□□□ -1
RPA3-207ENST00000483031 ADAM32Q8TC27 787 aa8.8□□□□□ -1
RPA3-207ENST00000483031 ARHGEF15O94989 841 aa8.79□□□□□ -1
RPA3-207ENST00000483031 IRS1P35568 1242 aa8.79□□□□□ -1
RPA3-207ENST00000483031 OCSTAMPQ9BR26 566 aa8.79□□□□□ -1
RPA3-207ENST00000483031 DNMT3AQ9Y6K1 912 aaPredicted RBP8.79□□□□□ -1
RPA3-207ENST00000483031 SENP3-EIF4A1A0A087X0R7 540 aa8.78□□□□□ -1
RPA3-207ENST00000483031 ADH1AP07327 375 aa8.78□□□□□ -1
RPA3-207ENST00000483031 SKIV2LQ15477 1246 aaKnown RBP8.78□□□□□ -1
RPA3-207ENST00000483031 KANK3Q6NY19 840 aa8.78□□□□□ -1
RPA3-207ENST00000483031 ZNF784Q8NCA9 323 aaPredicted RBP8.78□□□□□ -1
RPA3-207ENST00000483031 TMPRSS4Q9NRS4 437 aa8.78□□□□□ -1
RPA3-207ENST00000483031 ATP1B4Q9UN42 357 aaPredicted RBP8.78□□□□□ -1
RPA3-207ENST00000483031 RAB15P59190 212 aa8.77□□□□□ -1.01
RPA3-207ENST00000483031 SCARF2Q96GP6 870 aaPredicted RBP8.77□□□□□ -1.01
RPA3-207ENST00000483031 ADAMTS2O95450 1211 aa8.76□□□□□ -1.01
RPA3-207ENST00000483031 MAP3K10Q02779 954 aa8.76□□□□□ -1.01
RPA3-207ENST00000483031 SH3D19Q5HYK7 790 aa8.76□□□□□ -1.01
RPA3-207ENST00000483031 FOXD4L5Q5VV16 416 aaPredicted RBP8.76□□□□□ -1.01
RPA3-207ENST00000483031 PPP2R2DQ66LE6 453 aa8.76□□□□□ -1.01
RPA3-207ENST00000483031 GPAT2Q6NUI2 795 aa8.76□□□□□ -1.01
RPA3-207ENST00000483031 DZIP3Q86Y13 1208 aaKnown RBP8.76□□□□□ -1.01
RPA3-207ENST00000483031 AP1G2O75843 785 aa8.75□□□□□ -1.01
RPA3-207ENST00000483031 IGHA1P01876 353 aa8.75□□□□□ -1.01
RPA3-207ENST00000483031 PTGIRP43119 386 aa8.75□□□□□ -1.01
RPA3-207ENST00000483031 SRSF11Q05519 484 aaKnown RBP8.75□□□□□ -1.01
RPA3-207ENST00000483031 LYSMD3Q7Z3D4 306 aa8.75□□□□□ -1.01
RPA3-207ENST00000483031 TRIM52Q96A61 297 aa8.75□□□□□ -1.01
RPA3-207ENST00000483031 ERVH48-1M5A8F1 160 aa8.74□□□□□ -1.01
RPA3-207ENST00000483031 LILRA1O75019 489 aa8.74□□□□□ -1.01
RPA3-207ENST00000483031 FOXK2Q01167 660 aa8.74□□□□□ -1.01
RPA3-207ENST00000483031 FBXO31Q5XUX0 539 aaPredicted RBP8.74□□□□□ -1.01
RPA3-207ENST00000483031 PROCA1Q8NCQ7 364 aaPredicted RBP8.74□□□□□ -1.01
RPA3-207ENST00000483031 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
RPA3-207ENST00000483031 ADD1P35611 737 aaKnown RBP8.72□□□□□ -1.01
RPA3-207ENST00000483031 LYPD4Q6UWN0 246 aa8.72□□□□□ -1.01
RPA3-207ENST00000483031 ESPNB1AK53 854 aa8.71□□□□□ -1.02
RPA3-207ENST00000483031 KDF1Q8NAX2 398 aaPredicted RBP8.71□□□□□ -1.02
RPA3-207ENST00000483031 EPS8L1Q8TE68 723 aa8.71□□□□□ -1.02
RPA3-207ENST00000483031 DDRGK1Q96HY6 314 aa8.71□□□□□ -1.02
RPA3-207ENST00000483031 ENAMQ9NRM1 1142 aa8.71□□□□□ -1.02
RPA3-207ENST00000483031 CELA2BP08218 269 aaPredicted RBP8.7□□□□□ -1.02
RPA3-207ENST00000483031 GAS6Q14393 721 aa8.7□□□□□ -1.02
RPA3-207ENST00000483031 SEPT12Q8IYM1 358 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms