RNA–Protein interactions for RNA: ENST00000482968.1

PHGDH-205, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-205ENST00000482968 IP6K1Q92551 441 aa20.05■□□□□ 0.8
PHGDH-205ENST00000482968 KIF24Q5T7B8 1368 aa20.04■□□□□ 0.8
PHGDH-205ENST00000482968 U2AF1L5P0DN76 240 aaPredicted RBP20.04■□□□□ 0.8
PHGDH-205ENST00000482968 U2AF1Q01081 240 aaKnown RBP eCLIP20.04■□□□□ 0.8
PHGDH-205ENST00000482968 EIF4A2Q14240 407 aaKnown RBP20.04■□□□□ 0.8
PHGDH-205ENST00000482968 CHRNA2Q15822 529 aa20.02■□□□□ 0.8
PHGDH-205ENST00000482968 LTV1Q96GA3 475 aaPredicted RBP20.02■□□□□ 0.8
PHGDH-205ENST00000482968 KIAA0232Q92628 1395 aa20.02■□□□□ 0.79
PHGDH-205ENST00000482968 AXIN2Q9Y2T1 843 aa20.01■□□□□ 0.79
PHGDH-205ENST00000482968 RTL1A6NKG5 1358 aa20.01■□□□□ 0.79
PHGDH-205ENST00000482968 SENP3-EIF4A1A0A087X0R7 540 aa20■□□□□ 0.79
PHGDH-205ENST00000482968 HNRNPUQ00839 825 aaKnown RBP eCLIP20■□□□□ 0.79
PHGDH-205ENST00000482968 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
PHGDH-205ENST00000482968 HSPA1LP34931 641 aa19.99■□□□□ 0.79
PHGDH-205ENST00000482968 PRDM11Q9NQV5 511 aa19.99■□□□□ 0.79
PHGDH-205ENST00000482968 ABCA3Q99758 1704 aa19.99■□□□□ 0.79
PHGDH-205ENST00000482968 CPDO75976 1380 aa19.98■□□□□ 0.79
PHGDH-205ENST00000482968 COL22A1Q8NFW1 1626 aaPredicted RBP19.98■□□□□ 0.79
PHGDH-205ENST00000482968 HMOX1P09601 288 aa19.98■□□□□ 0.79
PHGDH-205ENST00000482968 RGPD5Q99666 1765 aa19.97■□□□□ 0.79
PHGDH-205ENST00000482968 NUTM2BA6NNL0 878 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-205ENST00000482968 NUTM2EB1AL46 878 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-205ENST00000482968 NUTM2AQ8IVF1 878 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-205ENST00000482968 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
PHGDH-205ENST00000482968 ANKRD24Q8TF21 1146 aa19.95■□□□□ 0.78
PHGDH-205ENST00000482968 EYA1Q99502 592 aa19.95■□□□□ 0.78
PHGDH-205ENST00000482968 BLMP54132 1417 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-205ENST00000482968 COL18A1P39060 1754 aa19.94■□□□□ 0.78
PHGDH-205ENST00000482968 JCADQ9P266 1359 aa19.94■□□□□ 0.78
PHGDH-205ENST00000482968 FCHSD2O94868 740 aa19.94■□□□□ 0.78
PHGDH-205ENST00000482968 SULT6B1Q6IMI4 303 aa19.94■□□□□ 0.78
PHGDH-205ENST00000482968 ADAMTS2O95450 1211 aa19.93■□□□□ 0.78
PHGDH-205ENST00000482968 MYT1Q01538 1121 aa19.93■□□□□ 0.78
PHGDH-205ENST00000482968 RUNDC1Q96C34 613 aa19.93■□□□□ 0.78
PHGDH-205ENST00000482968 SALL2Q9Y467 1007 aaPredicted RBP19.93■□□□□ 0.78
PHGDH-205ENST00000482968 AEBP1Q8IUX7 1158 aa19.92■□□□□ 0.78
PHGDH-205ENST00000482968 RSPH6AQ9H0K4 717 aa19.92■□□□□ 0.78
PHGDH-205ENST00000482968 PNNQ9H307 717 aaKnown RBP19.92■□□□□ 0.78
PHGDH-205ENST00000482968 APAF1O14727 1248 aa19.91■□□□□ 0.78
PHGDH-205ENST00000482968 PRKAR2BP31323 418 aa19.91■□□□□ 0.78
PHGDH-205ENST00000482968 NBPF6Q5VWK0 638 aa19.91■□□□□ 0.78
PHGDH-205ENST00000482968 NBPF4Q96M43 638 aa19.91■□□□□ 0.78
PHGDH-205ENST00000482968 PLEKHF1Q96S99 279 aa19.91■□□□□ 0.78
PHGDH-205ENST00000482968 ERBB3P21860 1342 aa19.91■□□□□ 0.78
PHGDH-205ENST00000482968 CSB-PGBD3P0DP91 1061 aa19.9■□□□□ 0.78
PHGDH-205ENST00000482968 IGSF1Q8N6C5 1336 aa19.9■□□□□ 0.78
PHGDH-205ENST00000482968 USHBP1Q8N6Y0 703 aa19.9■□□□□ 0.78
PHGDH-205ENST00000482968 RGPD1P0DJD0 1748 aa19.89■□□□□ 0.78
PHGDH-205ENST00000482968 CAMTA1Q9Y6Y1 1673 aa19.89■□□□□ 0.77
PHGDH-205ENST00000482968 RGPD2P0DJD1 1756 aa19.89■□□□□ 0.77
PHGDH-205ENST00000482968 TCP11L2Q8N4U5 519 aa19.88■□□□□ 0.77
PHGDH-205ENST00000482968 ABCC6O95255 1503 aa19.88■□□□□ 0.77
PHGDH-205ENST00000482968 NEFMP07197 916 aa19.88■□□□□ 0.77
PHGDH-205ENST00000482968 EVA1CP58658 441 aa19.88■□□□□ 0.77
PHGDH-205ENST00000482968 NLRP2Q9NX02 1062 aa19.88■□□□□ 0.77
PHGDH-205ENST00000482968 BTG4Q9NY30 223 aa19.88■□□□□ 0.77
PHGDH-205ENST00000482968 MAPK8IP3Q9UPT6 1336 aa19.87■□□□□ 0.77
PHGDH-205ENST00000482968 NEUROD2Q15784 382 aa19.87■□□□□ 0.77
PHGDH-205ENST00000482968 PHACTR3Q96KR7 559 aa19.87■□□□□ 0.77
PHGDH-205ENST00000482968 STRN4Q9NRL3 753 aa19.87■□□□□ 0.77
PHGDH-205ENST00000482968 LMO7Q8WWI1 1683 aa19.86■□□□□ 0.77
PHGDH-205ENST00000482968 RRP7AQ9Y3A4 280 aaKnown RBP19.86■□□□□ 0.77
PHGDH-205ENST00000482968 SPATA31A6Q5VVP1 1343 aa19.86■□□□□ 0.77
PHGDH-205ENST00000482968 COL14A1Q05707 1796 aaKnown RBP19.84■□□□□ 0.77
PHGDH-205ENST00000482968 KDRP35968 1356 aa19.84■□□□□ 0.77
PHGDH-205ENST00000482968 COL5A2P05997 1499 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-205ENST00000482968 TOM1L2Q6ZVM7 507 aa19.83■□□□□ 0.77
PHGDH-205ENST00000482968 ZBED9Q6R2W3 1325 aa19.83■□□□□ 0.77
PHGDH-205ENST00000482968 WDR17Q8IZU2 1322 aa19.83■□□□□ 0.77
PHGDH-205ENST00000482968 TMPOP42166 694 aaKnown RBP19.82■□□□□ 0.76
PHGDH-205ENST00000482968 LARP1Q6PKG0 1096 aaKnown RBP19.82■□□□□ 0.76
PHGDH-205ENST00000482968 C8orf37Q96NL8 207 aa19.81■□□□□ 0.76
PHGDH-205ENST00000482968 NGLY1Q96IV0 654 aa19.8■□□□□ 0.76
PHGDH-205ENST00000482968 RIPK4P57078 832 aa19.8■□□□□ 0.76
PHGDH-205ENST00000482968 FBXO41Q8TF61 875 aa19.8■□□□□ 0.76
PHGDH-205ENST00000482968 LRP6O75581 1613 aa19.78■□□□□ 0.76
PHGDH-205ENST00000482968 NFE2L2Q16236 605 aa19.78■□□□□ 0.76
PHGDH-205ENST00000482968 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
PHGDH-205ENST00000482968 USP35Q9P2H5 1018 aa19.78■□□□□ 0.76
PHGDH-205ENST00000482968 FAM208AQ9UK61 1670 aaKnown RBP19.78■□□□□ 0.76
PHGDH-205ENST00000482968 PLCH1Q4KWH8 1693 aa19.78■□□□□ 0.76
PHGDH-205ENST00000482968 NGEFQ8N5V2 710 aa19.78■□□□□ 0.76
PHGDH-205ENST00000482968 NCAPD2Q15021 1401 aa19.77■□□□□ 0.76
PHGDH-205ENST00000482968 MTHFSDQ2M296 383 aaKnown RBP19.77■□□□□ 0.76
PHGDH-205ENST00000482968 CARD10Q9BWT7 1032 aa19.77■□□□□ 0.76
PHGDH-205ENST00000482968 WWC1Q8IX03 1113 aa19.76■□□□□ 0.75
PHGDH-205ENST00000482968 RAPGEF4Q8WZA2 1011 aa19.76■□□□□ 0.75
PHGDH-205ENST00000482968 GTF3C3Q9Y5Q9 886 aa19.76■□□□□ 0.75
PHGDH-205ENST00000482968 CRB1P82279 1406 aa19.75■□□□□ 0.75
PHGDH-205ENST00000482968 TRIM35Q9UPQ4 493 aa19.75■□□□□ 0.75
PHGDH-205ENST00000482968 SLIT2O94813 1529 aa19.74■□□□□ 0.75
PHGDH-205ENST00000482968 TATP17735 454 aaPredicted RBP19.74■□□□□ 0.75
PHGDH-205ENST00000482968 CCDC27Q2M243 656 aa19.73■□□□□ 0.75
PHGDH-205ENST00000482968 NCBP3Q53F19 620 aaKnown RBP19.73■□□□□ 0.75
PHGDH-205ENST00000482968 ZNF521Q96K83 1311 aa19.73■□□□□ 0.75
PHGDH-205ENST00000482968 PLEKHO1Q53GL0 409 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-205ENST00000482968 UNC5CLQ8IV45 518 aa19.72■□□□□ 0.75
PHGDH-205ENST00000482968 FNBP4Q8N3X1 1017 aaPredicted RBP19.72■□□□□ 0.75
PHGDH-205ENST00000482968 GAS2L2Q8NHY3 880 aa19.72■□□□□ 0.75
PHGDH-205ENST00000482968 DLG5Q8TDM6 1919 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms