RNA–Protein interactions for RNA: ENST00000482745.5

HLA-DQA1-206, Transcript of major histocompatibility complex, class II, DQ alpha 1, human

Gene HLA-DQA1, Length 2,135 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-DQA1-206	ENST00000482745	AATK	Q6ZMQ8	1374 aa		13.99	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	YTHDC1	Q96MU7	727 aa	Known RBP	13.98	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	BLM	P54132	1417 aa	Predicted RBP	13.98	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	USP31	Q70CQ4	1352 aa		13.98	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	ARHGEF25	Q86VW2	580 aa		13.97	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	CCDC125	Q86Z20	511 aa		13.97	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	LTN1	O94822	1766 aa		13.97	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	CRB1	P82279	1406 aa		13.97	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	FAM182B	Q5T319	152 aa		13.97	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	TCP11L2	Q8N4U5	519 aa		13.96	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	AXIN2	Q9Y2T1	843 aa		13.96	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	ANKRD36B	Q8N2N9	1353 aa		13.96	□□□□□ -0.17
HLA-DQA1-206	ENST00000482745	SF3B2	Q13435	895 aa	Known RBP	13.96	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	CDCA8	Q53HL2	280 aa		13.95	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	BARGIN	Q6ZT62	677 aa		13.95	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	TOM1L2	Q6ZVM7	507 aa		13.95	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	MYOM1	P52179	1685 aa		13.95	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	OVOS2	A0A0J9YW53	1432 aa		13.95	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	OVOS2	Q6IE36	1432 aa		13.95	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	WDR17	Q8IZU2	1322 aa		13.94	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	ABCC6	O95255	1503 aa		13.94	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	RGPD1	P0DJD0	1748 aa		13.93	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	PARP4	Q9UKK3	1724 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	WNK3	Q9BYP7	1800 aa		13.93	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	CSB-PGBD3	P0DP91	1061 aa		13.93	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	THRAP3	Q9Y2W1	955 aa	Known RBP	13.93	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	PDE3B	Q13370	1112 aa		13.92	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	DEFB132	Q7Z7B7	95 aa		13.92	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	MIER1	Q8N108	512 aa		13.91	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	KIF20B	Q96Q89	1820 aa		13.91	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	LRRC37A3	O60309	1634 aa		13.91	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	COG3	Q96JB2	828 aa		13.91	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	POLR3GL	Q9BT43	218 aa		13.91	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	TNS1	Q9HBL0	1735 aa	Known RBP	13.9	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
HLA-DQA1-206	ENST00000482745	HSPA5	P11021	654 aa	Known RBP	13.88	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	BAG6	P46379	1132 aa		13.88	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	FAM196A	Q6ZSG2	479 aa		13.88	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	ERBB3	P21860	1342 aa		13.88	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	CARD10	Q9BWT7	1032 aa		13.88	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	GGNBP2	Q9H3C7	697 aa		13.88	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	NSD3	Q9BZ95	1437 aa		13.87	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	TRIM37	O94972	964 aa		13.87	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	DDB1	Q16531	1140 aa		13.87	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	ANP32E	Q9BTT0	268 aa		13.87	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	CCDC7	Q96M83	1385 aa		13.86	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	FYB1	O15117	783 aa		13.86	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	FBLN1	P23142	703 aa		13.86	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	ANKRD24	Q8TF21	1146 aa		13.86	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	NLRP2	Q9NX02	1062 aa		13.86	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	MAP3K19	Q56UN5	1328 aa		13.85	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	OVOS2	A0A0G2JMS6	1433 aa		13.85	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	CDCA7	Q9BWT1	371 aa	Predicted RBP	13.85	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	FAM208A	Q9UK61	1670 aa	Known RBP	13.85	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	PEAK1	Q9H792	1746 aa		13.85	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	DISP2	A7MBM2	1401 aa		13.85	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	EN1	Q05925	392 aa	Predicted RBP	13.84	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	IP6K1	Q92551	441 aa		13.84	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	LTV1	Q96GA3	475 aa	Predicted RBP	13.84	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	CARD14	Q9BXL6	1004 aa		13.84	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	AMPH	P49418	695 aa		13.84	□□□□□ -0.19
HLA-DQA1-206	ENST00000482745	RRS1	Q15050	365 aa	Known RBP	13.83	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	SBF2	Q86WG5	1849 aa		13.82	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	HOXC9	P31274	260 aa		13.82	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	BCL11A	Q9H165	835 aa		13.82	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	TNS2	Q63HR2	1409 aa		13.82	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	APBA3	O96018	575 aa		13.82	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	RGPD2	P0DJD1	1756 aa		13.81	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	RTL1	A6NKG5	1358 aa		13.81	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	EXOC5	O00471	708 aa		13.81	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	EZH2	Q15910	746 aa	Known RBP	13.81	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	MARCH10	Q8NA82	808 aa	Predicted RBP	13.81	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.81	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	C11orf95	C9JLR9	678 aa	Predicted RBP	13.8	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	IL2RB	P14784	551 aa		13.8	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	CGNL1	Q0VF96	1302 aa		13.79	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	ANKRD26	Q9UPS8	1709 aa		13.78	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	RREB1	Q92766	1687 aa		13.78	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	CAMKK2	Q96RR4	588 aa		13.78	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	SMG6	Q86US8	1419 aa	Known RBP	13.78	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	SRCAP	Q6ZRS2	3230 aa		13.77	□□□□□ -0.2
HLA-DQA1-206	ENST00000482745	FLT4	P35916	1363 aa		13.77	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	PARD3	Q8TEW0	1356 aa		13.77	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	NUP188	Q5SRE5	1749 aa		13.77	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	PSD	A5PKW4	1024 aa	Predicted RBP	13.76	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	PANK3	Q9H999	370 aa		13.76	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	EMILIN1	Q9Y6C2	1016 aa		13.76	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	MAP2	P11137	1827 aa	Known RBP	13.76	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	BCL9	O00512	1426 aa		13.75	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	PPM1G	O15355	546 aa	Predicted RBP	13.75	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	HSP90AB2P	Q58FF8	381 aa		13.75	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	PTF1A	Q7RTS3	328 aa		13.75	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	INSR	P06213	1382 aa		13.75	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.75	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	TSHZ2	Q9NRE2	1034 aa		13.75	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.74	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	RGPD4	Q7Z3J3	1758 aa		13.74	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	NHS	Q6T4R5	1651 aa		13.74	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	KIF24	Q5T7B8	1368 aa		13.74	□□□□□ -0.21
HLA-DQA1-206	ENST00000482745	USHBP1	Q8N6Y0	703 aa		13.74	□□□□□ -0.21

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