RNA–Protein interactions for RNA: ENST00000482659.2

SHANK2-216, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 381 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-216ENST00000482659 AMER1Q5JTC6 1135 aaPredicted RBP6.18□□□□□ -1.42
SHANK2-216ENST00000482659 POTEAQ6S8J7 498 aa6.18□□□□□ -1.42
SHANK2-216ENST00000482659 IP6K1Q92551 441 aa6.18□□□□□ -1.42
SHANK2-216ENST00000482659 CDCA7Q9BWT1 371 aaPredicted RBP6.18□□□□□ -1.42
SHANK2-216ENST00000482659 STRN4Q9NRL3 753 aa6.18□□□□□ -1.42
SHANK2-216ENST00000482659 ZRANB1Q9UGI0 708 aa6.18□□□□□ -1.42
SHANK2-216ENST00000482659 NPC1L1Q9UHC9 1359 aa6.18□□□□□ -1.42
SHANK2-216ENST00000482659 LRP6O75581 1613 aa6.17□□□□□ -1.42
SHANK2-216ENST00000482659 ZNF316A6NFI3 1004 aaPredicted RBP6.17□□□□□ -1.42
SHANK2-216ENST00000482659 ONECUT3O60422 494 aaPredicted RBP6.17□□□□□ -1.42
SHANK2-216ENST00000482659 TOM1L2Q6ZVM7 507 aa6.17□□□□□ -1.42
SHANK2-216ENST00000482659 OVOS2A0A0J9YW53 1432 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 OVOS2Q6IE36 1432 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 BCL9LQ86UU0 1499 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 SLIT2O94813 1529 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 MED1Q15648 1581 aaPredicted RBP6.16□□□□□ -1.42
SHANK2-216ENST00000482659 SPDYE4A6NLX3 237 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 PPM1GO15355 546 aaPredicted RBP6.16□□□□□ -1.42
SHANK2-216ENST00000482659 HOXC9P31274 260 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 BARGINQ6ZT62 677 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 TCP11L2Q8N4U5 519 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 CARD10Q9BWT7 1032 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 AXIN2Q9Y2T1 843 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 MAP3K19Q56UN5 1328 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 SPATA31A5Q5VU36 1347 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 SPATA31A7Q8IWB4 1347 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 WDR17Q8IZU2 1322 aa6.16□□□□□ -1.42
SHANK2-216ENST00000482659 COL22A1Q8NFW1 1626 aaPredicted RBP6.15□□□□□ -1.42
SHANK2-216ENST00000482659 SHPRHQ149N8 1683 aa6.15□□□□□ -1.42
SHANK2-216ENST00000482659 A0A0G2JS52 829 aa6.15□□□□□ -1.42
SHANK2-216ENST00000482659 MYT1Q01538 1121 aa6.15□□□□□ -1.42
SHANK2-216ENST00000482659 DDX10Q13206 875 aaKnown RBP6.15□□□□□ -1.42
SHANK2-216ENST00000482659 RRS1Q15050 365 aaKnown RBP6.15□□□□□ -1.42
SHANK2-216ENST00000482659 CC2D1BQ5T0F9 858 aaKnown RBP6.15□□□□□ -1.42
SHANK2-216ENST00000482659 LARP1Q6PKG0 1096 aaKnown RBP6.15□□□□□ -1.42
SHANK2-216ENST00000482659 ANKRD24Q8TF21 1146 aa6.15□□□□□ -1.42
SHANK2-216ENST00000482659 NLRP2Q9NX02 1062 aa6.15□□□□□ -1.42
SHANK2-216ENST00000482659 POLKQ9UBT6 870 aa6.15□□□□□ -1.42
SHANK2-216ENST00000482659 SPATA31A1Q5TZJ5 1347 aa6.15□□□□□ -1.43
SHANK2-216ENST00000482659 RTL1A6NKG5 1358 aa6.15□□□□□ -1.43
SHANK2-216ENST00000482659 BLMP54132 1417 aaPredicted RBP6.15□□□□□ -1.43
SHANK2-216ENST00000482659 TOPAZ1Q8N9V7 1692 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 ITSN1Q15811 1721 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 TNNT2P45379 298 aaPredicted RBP6.14□□□□□ -1.43
SHANK2-216ENST00000482659 PDE3BQ13370 1112 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 RALBP1Q15311 655 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 ILDR2Q71H61 639 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 SEPT12Q8IYM1 358 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 CFAP53Q96M91 514 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 USP35Q9P2H5 1018 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 ERBB3P21860 1342 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 INSRP06213 1382 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 FLT4P35916 1363 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 ATRNO75882 1429 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 SMG6Q86US8 1419 aaKnown RBP6.14□□□□□ -1.43
SHANK2-216ENST00000482659 SLIT3O75094 1523 aa6.14□□□□□ -1.43
SHANK2-216ENST00000482659 SPDYE2BA6NHP3 402 aa6.13□□□□□ -1.43
SHANK2-216ENST00000482659 EXOC5O00471 708 aa6.13□□□□□ -1.43
SHANK2-216ENST00000482659 SPDYE6P0CI01 402 aa6.13□□□□□ -1.43
SHANK2-216ENST00000482659 FAM98CQ17RN3 349 aaKnown RBP6.13□□□□□ -1.43
SHANK2-216ENST00000482659 SPDYE2Q495Y8 402 aa6.13□□□□□ -1.43
SHANK2-216ENST00000482659 HSP90AB2PQ58FF8 381 aa6.13□□□□□ -1.43
SHANK2-216ENST00000482659 CCDC125Q86Z20 511 aa6.13□□□□□ -1.43
SHANK2-216ENST00000482659 LTV1Q96GA3 475 aaPredicted RBP6.13□□□□□ -1.43
SHANK2-216ENST00000482659 CRB1P82279 1406 aa6.13□□□□□ -1.43
SHANK2-216ENST00000482659 CDK12Q9NYV4 1490 aaPredicted RBP6.13□□□□□ -1.43
SHANK2-216ENST00000482659 COL5A2P05997 1499 aaPredicted RBP6.12□□□□□ -1.43
SHANK2-216ENST00000482659 IL2RBP14784 551 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 FBLN1P23142 703 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 MTHFSP49914 203 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 DDB1Q16531 1140 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 KRT27Q7Z3Y8 459 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 RAPGEF4Q8WZA2 1011 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 NUDCQ9Y266 331 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 EMILIN1Q9Y6C2 1016 aa6.12□□□□□ -1.43
SHANK2-216ENST00000482659 TRPM3Q9HCF6 1732 aaPredicted RBP6.11□□□□□ -1.43
SHANK2-216ENST00000482659 DIAPH1O60610 1272 aaKnown RBP6.11□□□□□ -1.43
SHANK2-216ENST00000482659 CNGB1Q14028 1251 aaPredicted RBP6.11□□□□□ -1.43
SHANK2-216ENST00000482659 FAM196AQ6ZSG2 479 aa6.11□□□□□ -1.43
SHANK2-216ENST00000482659 ALS2Q96Q42 1657 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 ABCC6O95255 1503 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 ANP32CO43423 234 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 TATP17735 454 aaPredicted RBP6.1□□□□□ -1.43
SHANK2-216ENST00000482659 PPP2R1AP30153 589 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 SF3B2Q13435 895 aaKnown RBP6.1□□□□□ -1.43
SHANK2-216ENST00000482659 EIF4A2Q14240 407 aaKnown RBP6.1□□□□□ -1.43
SHANK2-216ENST00000482659 NBPF6Q5VWK0 638 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 NBPF4Q96M43 638 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 PNNQ9H307 717 aaKnown RBP6.1□□□□□ -1.43
SHANK2-216ENST00000482659 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.1□□□□□ -1.433e-7■■□□□ 11.7
SHANK2-216ENST00000482659 SPG7Q9UQ90 795 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 CAMTA1Q9Y6Y1 1673 aa6.1□□□□□ -1.43
SHANK2-216ENST00000482659 NFAT5O94916 1531 aa6.09□□□□□ -1.43
SHANK2-216ENST00000482659 NEFMP07197 916 aa6.09□□□□□ -1.43
SHANK2-216ENST00000482659 HMGB2P26583 209 aaKnown RBP6.09□□□□□ -1.43
SHANK2-216ENST00000482659 IL13P35225 146 aa6.09□□□□□ -1.43
SHANK2-216ENST00000482659 AMOTQ4VCS5 1084 aa6.09□□□□□ -1.43
SHANK2-216ENST00000482659 ZCRB1Q8TBF4 217 aaKnown RBP6.09□□□□□ -1.43
SHANK2-216ENST00000482659 EYA1Q99502 592 aa6.09□□□□□ -1.43
SHANK2-216ENST00000482659 RBM42Q9BTD8 480 aaKnown RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 143.5 ms