RNA–Protein interactions for RNA: ENST00000482172.5

IFT88-206, Transcript of intraflagellar transport 88, humanhuman

TSL 3

Gene IFT88, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-206ENST00000482172 ABCC6O95255 1503 aa16.65■□□□□ 0.26
IFT88-206ENST00000482172 CPDO75976 1380 aa16.65■□□□□ 0.26
IFT88-206ENST00000482172 HOXC9P31274 260 aa16.65■□□□□ 0.26
IFT88-206ENST00000482172 COL22A1Q8NFW1 1626 aaPredicted RBP16.65■□□□□ 0.26
IFT88-206ENST00000482172 HSP90AB2PQ58FF8 381 aa16.64■□□□□ 0.25
IFT88-206ENST00000482172 CNKSR2Q8WXI2 1034 aa16.64■□□□□ 0.25
IFT88-206ENST00000482172 YTHDC1Q96MU7 727 aaKnown RBP16.64■□□□□ 0.25
IFT88-206ENST00000482172 EIF4A2Q14240 407 aaKnown RBP16.63■□□□□ 0.25
IFT88-206ENST00000482172 PNNQ9H307 717 aaKnown RBP16.63■□□□□ 0.25
IFT88-206ENST00000482172 U2AF1L5P0DN76 240 aaPredicted RBP16.62■□□□□ 0.25
IFT88-206ENST00000482172 U2AF1Q01081 240 aaKnown RBP eCLIP16.62■□□□□ 0.25
IFT88-206ENST00000482172 CABLES1Q8TDN4 633 aa16.62■□□□□ 0.25
IFT88-206ENST00000482172 ABCA3Q99758 1704 aa16.62■□□□□ 0.25
IFT88-206ENST00000482172 U2SURPO15042 1029 aaKnown RBP16.61■□□□□ 0.25
IFT88-206ENST00000482172 FCHSD2O94868 740 aa16.61■□□□□ 0.25
IFT88-206ENST00000482172 ZC3H6P61129 1189 aaKnown RBP16.6■□□□□ 0.25
IFT88-206ENST00000482172 HNRNPUQ00839 825 aaKnown RBP eCLIP16.6■□□□□ 0.25
IFT88-206ENST00000482172 RGPD1P0DJD0 1748 aa16.59■□□□□ 0.25
IFT88-206ENST00000482172 NGEFQ8N5V2 710 aa16.59■□□□□ 0.25
IFT88-206ENST00000482172 RUNDC1Q96C34 613 aa16.59■□□□□ 0.25
IFT88-206ENST00000482172 COL18A1P39060 1754 aa16.59■□□□□ 0.25
IFT88-206ENST00000482172 HAP1P54257 671 aaPredicted RBP16.58■□□□□ 0.24
IFT88-206ENST00000482172 KIAA0232Q92628 1395 aa16.58■□□□□ 0.24
IFT88-206ENST00000482172 ZBED9Q6R2W3 1325 aa16.57■□□□□ 0.24
IFT88-206ENST00000482172 PLEKHG5O94827 1062 aa16.57■□□□□ 0.24
IFT88-206ENST00000482172 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
IFT88-206ENST00000482172 PLEKHF1Q96S99 279 aa16.57■□□□□ 0.24
IFT88-206ENST00000482172 IGSF1Q8N6C5 1336 aa16.56■□□□□ 0.24
IFT88-206ENST00000482172 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
IFT88-206ENST00000482172 RSPH6AQ9H0K4 717 aa16.56■□□□□ 0.24
IFT88-206ENST00000482172 KDRP35968 1356 aa16.55■□□□□ 0.24
IFT88-206ENST00000482172 JCADQ9P266 1359 aa16.55■□□□□ 0.24
IFT88-206ENST00000482172 EYA1Q99502 592 aa16.55■□□□□ 0.24
IFT88-206ENST00000482172 PRDM11Q9NQV5 511 aa16.55■□□□□ 0.24
IFT88-206ENST00000482172 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
IFT88-206ENST00000482172 CCDC146Q8IYE0 955 aa16.54■□□□□ 0.24
IFT88-206ENST00000482172 LMO7Q8WWI1 1683 aa16.53■□□□□ 0.24
IFT88-206ENST00000482172 ERBB3P21860 1342 aa16.53■□□□□ 0.24
IFT88-206ENST00000482172 NEFMP07197 916 aa16.53■□□□□ 0.24
IFT88-206ENST00000482172 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
IFT88-206ENST00000482172 ANKRD24Q8TF21 1146 aa16.53■□□□□ 0.24
IFT88-206ENST00000482172 NCAPD2Q15021 1401 aa16.53■□□□□ 0.24
IFT88-206ENST00000482172 MAPK8IP3Q9UPT6 1336 aa16.52■□□□□ 0.24
IFT88-206ENST00000482172 APAF1O14727 1248 aa16.52■□□□□ 0.24
IFT88-206ENST00000482172 CENPBP07199 599 aaPredicted RBP16.52■□□□□ 0.24
IFT88-206ENST00000482172 HMOX1P09601 288 aa16.52■□□□□ 0.24
IFT88-206ENST00000482172 PRKAR2BP31323 418 aa16.52■□□□□ 0.24
IFT88-206ENST00000482172 SULT6B1Q6IMI4 303 aa16.52■□□□□ 0.24
IFT88-206ENST00000482172 LTV1Q96GA3 475 aaPredicted RBP16.52■□□□□ 0.24
IFT88-206ENST00000482172 FAM208AQ9UK61 1670 aaKnown RBP16.52■□□□□ 0.23
IFT88-206ENST00000482172 CAMTA1Q9Y6Y1 1673 aa16.51■□□□□ 0.23
IFT88-206ENST00000482172 CHRNA2Q15822 529 aa16.51■□□□□ 0.23
IFT88-206ENST00000482172 TCP11L2Q8N4U5 519 aa16.51■□□□□ 0.23
IFT88-206ENST00000482172 COL14A1Q05707 1796 aaKnown RBP16.51■□□□□ 0.23
IFT88-206ENST00000482172 RGPD5Q99666 1765 aa16.51■□□□□ 0.23
IFT88-206ENST00000482172 FAM83GA6ND36 823 aa16.5■□□□□ 0.23
IFT88-206ENST00000482172 NBPF6Q5VWK0 638 aa16.5■□□□□ 0.23
IFT88-206ENST00000482172 NBPF4Q96M43 638 aa16.5■□□□□ 0.23
IFT88-206ENST00000482172 SPATA31A6Q5VVP1 1343 aa16.49■□□□□ 0.23
IFT88-206ENST00000482172 CCDC27Q2M243 656 aa16.49■□□□□ 0.23
IFT88-206ENST00000482172 AEBP1Q8IUX7 1158 aa16.49■□□□□ 0.23
IFT88-206ENST00000482172 HSPA1LP34931 641 aa16.48■□□□□ 0.23
IFT88-206ENST00000482172 PDE3BQ13370 1112 aa16.48■□□□□ 0.23
IFT88-206ENST00000482172 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
IFT88-206ENST00000482172 COL5A2P05997 1499 aaPredicted RBP16.48■□□□□ 0.23
IFT88-206ENST00000482172 WDR17Q8IZU2 1322 aa16.47■□□□□ 0.23
IFT88-206ENST00000482172 TMPOP42166 694 aaKnown RBP16.47■□□□□ 0.23
IFT88-206ENST00000482172 ZNF521Q96K83 1311 aa16.46■□□□□ 0.23
IFT88-206ENST00000482172 NFE2L2Q16236 605 aa16.46■□□□□ 0.23
IFT88-206ENST00000482172 PHACTR3Q96KR7 559 aa16.46■□□□□ 0.23
IFT88-206ENST00000482172 RGPD2P0DJD1 1756 aa16.46■□□□□ 0.22
IFT88-206ENST00000482172 CSB-PGBD3P0DP91 1061 aa16.45■□□□□ 0.22
IFT88-206ENST00000482172 RNF216Q9NWF9 866 aaPredicted RBP16.44■□□□□ 0.22
IFT88-206ENST00000482172 NLRP2Q9NX02 1062 aa16.44■□□□□ 0.22
IFT88-206ENST00000482172 NUTM2BA6NNL0 878 aaPredicted RBP16.43■□□□□ 0.22
IFT88-206ENST00000482172 NUTM2EB1AL46 878 aaPredicted RBP16.43■□□□□ 0.22
IFT88-206ENST00000482172 EVA1CP58658 441 aa16.43■□□□□ 0.22
IFT88-206ENST00000482172 NUTM2AQ8IVF1 878 aaPredicted RBP16.43■□□□□ 0.22
IFT88-206ENST00000482172 WWC1Q8IX03 1113 aa16.43■□□□□ 0.22
IFT88-206ENST00000482172 GAS2L2Q8NHY3 880 aa16.43■□□□□ 0.22
IFT88-206ENST00000482172 BTG4Q9NY30 223 aa16.43■□□□□ 0.22
IFT88-206ENST00000482172 SALL2Q9Y467 1007 aaPredicted RBP16.43■□□□□ 0.22
IFT88-206ENST00000482172 ADAMTS2O95450 1211 aa16.42■□□□□ 0.22
IFT88-206ENST00000482172 RIPK4P57078 832 aa16.42■□□□□ 0.22
IFT88-206ENST00000482172 LMOD3Q0VAK6 560 aa16.42■□□□□ 0.22
IFT88-206ENST00000482172 WDR63Q8IWG1 891 aa16.42■□□□□ 0.22
IFT88-206ENST00000482172 USHBP1Q8N6Y0 703 aa16.42■□□□□ 0.22
IFT88-206ENST00000482172 CARD10Q9BWT7 1032 aa16.42■□□□□ 0.22
IFT88-206ENST00000482172 RRP7AQ9Y3A4 280 aaKnown RBP16.42■□□□□ 0.22
IFT88-206ENST00000482172 PLCH1Q4KWH8 1693 aa16.41■□□□□ 0.22
IFT88-206ENST00000482172 SENP3-EIF4A1A0A087X0R7 540 aa16.41■□□□□ 0.22
IFT88-206ENST00000482172 NEUROD2Q15784 382 aa16.41■□□□□ 0.22
IFT88-206ENST00000482172 AMOTQ4VCS5 1084 aa16.41■□□□□ 0.22
IFT88-206ENST00000482172 TOM1L2Q6ZVM7 507 aa16.41■□□□□ 0.22
IFT88-206ENST00000482172 CRB1P82279 1406 aa16.41■□□□□ 0.22
IFT88-206ENST00000482172 NWD2Q9ULI1 1742 aa16.41■□□□□ 0.22
IFT88-206ENST00000482172 SLIT2O94813 1529 aa16.4■□□□□ 0.22
IFT88-206ENST00000482172 GOLGA2Q08379 1002 aa16.4■□□□□ 0.22
IFT88-206ENST00000482172 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
IFT88-206ENST00000482172 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms