RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
HPS4-212ENST00000481910 MAP3K19Q56UN5 1328 aa15.61■□□□□ 0.09
HPS4-212ENST00000481910 KIAA0232Q92628 1395 aa15.61■□□□□ 0.09
HPS4-212ENST00000481910 AMPHP49418 695 aa15.6■□□□□ 0.09
HPS4-212ENST00000481910 PRDM11Q9NQV5 511 aa15.6■□□□□ 0.09
HPS4-212ENST00000481910 LTN1O94822 1766 aa15.6■□□□□ 0.09
HPS4-212ENST00000481910 CHRNA2Q15822 529 aa15.59■□□□□ 0.09
HPS4-212ENST00000481910 CPDO75976 1380 aa15.59■□□□□ 0.09
HPS4-212ENST00000481910 PPP4R3CPQ6ZMV5 832 aa15.58■□□□□ 0.09
HPS4-212ENST00000481910 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
HPS4-212ENST00000481910 MIER1Q8N108 512 aa15.58■□□□□ 0.08
HPS4-212ENST00000481910 PODXL2Q9NZ53 605 aa15.57■□□□□ 0.08
HPS4-212ENST00000481910 HOXC9P31274 260 aa15.56■□□□□ 0.08
HPS4-212ENST00000481910 ILDR1Q86SU0 546 aaPredicted RBP15.56■□□□□ 0.08
HPS4-212ENST00000481910 IP6K1Q92551 441 aa15.56■□□□□ 0.08
HPS4-212ENST00000481910 MEX3CQ5U5Q3 659 aaKnown RBP15.56■□□□□ 0.08
HPS4-212ENST00000481910 FLT4P35916 1363 aa15.56■□□□□ 0.08
HPS4-212ENST00000481910 HSP90AB2PQ58FF8 381 aa15.55■□□□□ 0.08
HPS4-212ENST00000481910 CFAP53Q96M91 514 aa15.55■□□□□ 0.08
HPS4-212ENST00000481910 AXIN2Q9Y2T1 843 aa15.55■□□□□ 0.08
HPS4-212ENST00000481910 KIF24Q5T7B8 1368 aa15.55■□□□□ 0.08
HPS4-212ENST00000481910 LRP6O75581 1613 aa15.55■□□□□ 0.08
HPS4-212ENST00000481910 SMG6Q86US8 1419 aaKnown RBP15.54■□□□□ 0.08
HPS4-212ENST00000481910 PEAK1Q9H792 1746 aa15.54■□□□□ 0.08
HPS4-212ENST00000481910 RTL1A6NKG5 1358 aa15.54■□□□□ 0.08
HPS4-212ENST00000481910 NGLY1Q96IV0 654 aa15.54■□□□□ 0.08
HPS4-212ENST00000481910 C8orf37Q96NL8 207 aa15.54■□□□□ 0.08
HPS4-212ENST00000481910 TAOK2Q9UL54 1235 aa15.54■□□□□ 0.08
HPS4-212ENST00000481910 CDK12Q9NYV4 1490 aaPredicted RBP15.53■□□□□ 0.08
HPS4-212ENST00000481910 BTG4Q9NY30 223 aa15.53■□□□□ 0.08
HPS4-212ENST00000481910 COL18A1P39060 1754 aa15.52■□□□□ 0.08
HPS4-212ENST00000481910 RGPD5Q99666 1765 aa15.52■□□□□ 0.08
HPS4-212ENST00000481910 COL14A1Q05707 1796 aaKnown RBP15.52■□□□□ 0.07
HPS4-212ENST00000481910 CCDC184Q52MB2 194 aa15.52■□□□□ 0.07
HPS4-212ENST00000481910 LTV1Q96GA3 475 aaPredicted RBP15.52■□□□□ 0.07
HPS4-212ENST00000481910 BLMP54132 1417 aaPredicted RBP15.51■□□□□ 0.07
HPS4-212ENST00000481910 INSRP06213 1382 aa15.51■□□□□ 0.07
HPS4-212ENST00000481910 MRS2Q9HD23 443 aa15.51■□□□□ 0.07
HPS4-212ENST00000481910 DIAPH1O60610 1272 aaKnown RBP15.51■□□□□ 0.07
HPS4-212ENST00000481910 EVA1CP58658 441 aa15.51■□□□□ 0.07
HPS4-212ENST00000481910 CAMTA1Q9Y6Y1 1673 aa15.5■□□□□ 0.07
HPS4-212ENST00000481910 ABCC6O95255 1503 aa15.5■□□□□ 0.07
HPS4-212ENST00000481910 STRN4Q9NRL3 753 aa15.5■□□□□ 0.07
HPS4-212ENST00000481910 LMO7Q8WWI1 1683 aa15.49■□□□□ 0.07
HPS4-212ENST00000481910 CCER2I3L3R5 266 aa15.49■□□□□ 0.07
HPS4-212ENST00000481910 CSB-PGBD3P0DP91 1061 aa15.49■□□□□ 0.07
HPS4-212ENST00000481910 EIF4A2Q14240 407 aaKnown RBP15.49■□□□□ 0.07
HPS4-212ENST00000481910 ANKRD24Q8TF21 1146 aa15.49■□□□□ 0.07
HPS4-212ENST00000481910 ERBB3P21860 1342 aa15.48■□□□□ 0.07
HPS4-212ENST00000481910 PLCH1Q4KWH8 1693 aa15.48■□□□□ 0.07
HPS4-212ENST00000481910 IL13P35225 146 aa15.47■□□□□ 0.07
HPS4-212ENST00000481910 FNBP4Q8N3X1 1017 aaPredicted RBP15.47■□□□□ 0.07
HPS4-212ENST00000481910 NUDCQ9Y266 331 aa15.47■□□□□ 0.07
HPS4-212ENST00000481910 COL5A2P05997 1499 aaPredicted RBP15.47■□□□□ 0.07
HPS4-212ENST00000481910 SLIT2O94813 1529 aa15.47■□□□□ 0.07
HPS4-212ENST00000481910 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
HPS4-212ENST00000481910 COL3A1P02461 1466 aaPredicted RBP15.46■□□□□ 0.07
HPS4-212ENST00000481910 NPM3O75607 178 aaKnown RBP15.46■□□□□ 0.07
HPS4-212ENST00000481910 USP21Q9UK80 565 aa15.46■□□□□ 0.07
HPS4-212ENST00000481910 AFF2P51816 1311 aa15.46■□□□□ 0.06
HPS4-212ENST00000481910 NWD2Q9ULI1 1742 aa15.46■□□□□ 0.06
HPS4-212ENST00000481910 LARP1Q6PKG0 1096 aaKnown RBP15.45■□□□□ 0.06
HPS4-212ENST00000481910 TOM1L2Q6ZVM7 507 aa15.45■□□□□ 0.06
HPS4-212ENST00000481910 UNC5CLQ8IV45 518 aa15.45■□□□□ 0.06
HPS4-212ENST00000481910 NLRP2Q9NX02 1062 aa15.45■□□□□ 0.06
HPS4-212ENST00000481910 WDR17Q8IZU2 1322 aa15.45■□□□□ 0.06
HPS4-212ENST00000481910 PLCB2Q00722 1185 aa15.45■□□□□ 0.06
HPS4-212ENST00000481910 EYA1Q99502 592 aa15.45■□□□□ 0.06
HPS4-212ENST00000481910 BCL9LQ86UU0 1499 aa15.44■□□□□ 0.06
HPS4-212ENST00000481910 NBPF6Q5VWK0 638 aa15.44■□□□□ 0.06
HPS4-212ENST00000481910 NBPF4Q96M43 638 aa15.44■□□□□ 0.06
HPS4-212ENST00000481910 U2AF1L5P0DN76 240 aaPredicted RBP15.43■□□□□ 0.06
HPS4-212ENST00000481910 U2AF1Q01081 240 aaKnown RBP eCLIP15.43■□□□□ 0.06
HPS4-212ENST00000481910 WDR43Q15061 677 aaKnown RBP eCLIP15.43■□□□□ 0.06
HPS4-212ENST00000481910 PNISRQ8TF01 805 aaKnown RBP15.43■□□□□ 0.06
HPS4-212ENST00000481910 USP35Q9P2H5 1018 aa15.43■□□□□ 0.06
HPS4-212ENST00000481910 CCDC9Q9Y3X0 531 aaKnown RBP15.43■□□□□ 0.06
HPS4-212ENST00000481910 RGPD2P0DJD1 1756 aa15.42■□□□□ 0.06
HPS4-212ENST00000481910 USHBP1Q8N6Y0 703 aa15.42■□□□□ 0.06
HPS4-212ENST00000481910 NRAPQ86VF7 1730 aa15.42■□□□□ 0.06
HPS4-212ENST00000481910 CRB1P82279 1406 aa15.41■□□□□ 0.06
HPS4-212ENST00000481910 FAM9BQ8IZU0 186 aa15.41■□□□□ 0.06
HPS4-212ENST00000481910 FAM208AQ9UK61 1670 aaKnown RBP15.41■□□□□ 0.06
HPS4-212ENST00000481910 HMOX1P09601 288 aa15.41■□□□□ 0.06
HPS4-212ENST00000481910 SULT6B1Q6IMI4 303 aa15.41■□□□□ 0.06
HPS4-212ENST00000481910 CARD10Q9BWT7 1032 aa15.41■□□□□ 0.06
HPS4-212ENST00000481910 IGSF1Q8N6C5 1336 aa15.4■□□□□ 0.06
HPS4-212ENST00000481910 VPS72Q15906 364 aa15.4■□□□□ 0.06
HPS4-212ENST00000481910 ADAMTS8Q9UP79 889 aa15.4■□□□□ 0.06
HPS4-212ENST00000481910 ZNF772Q68DY9 489 aaPredicted RBP15.39■□□□□ 0.05
HPS4-212ENST00000481910 RGPD1P0DJD0 1748 aa15.39■□□□□ 0.05
HPS4-212ENST00000481910 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.39■□□□□ 0.05
HPS4-212ENST00000481910 AEBP1Q8IUX7 1158 aa15.39■□□□□ 0.05
HPS4-212ENST00000481910 QTRT2Q9H974 415 aaKnown RBP15.39■□□□□ 0.05
HPS4-212ENST00000481910 TRPC5Q9UL62 973 aaPredicted RBP15.39■□□□□ 0.05
HPS4-212ENST00000481910 FCHSD2O94868 740 aa15.38■□□□□ 0.05
HPS4-212ENST00000481910 SPATA31A5Q5VU36 1347 aa15.38■□□□□ 0.05
HPS4-212ENST00000481910 SPATA31A7Q8IWB4 1347 aa15.38■□□□□ 0.05
HPS4-212ENST00000481910 TCP11L2Q8N4U5 519 aa15.37■□□□□ 0.05
HPS4-212ENST00000481910 SPATA31A1Q5TZJ5 1347 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms