RNA–Protein interactions for RNA: ENST00000481897.1

RAB3IP-206, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 3,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-206ENST00000481897 DISP2A7MBM2 1401 aa3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 PAK3O75914 559 aaPredicted RBP3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 COL24A1Q17RW2 1714 aa3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 PARD3Q8TEW0 1356 aa3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 PRR29P0C7W0 189 aa3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 NLRP13Q86W25 1043 aa3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 CDK19Q9BWU1 502 aa3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 PCGF6Q9BYE7 350 aa3.76□□□□□ -1.81
RAB3IP-206ENST00000481897 A0A1W2PP64 1363 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 PRR36Q9H6K5 1346 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 RGL3Q3MIN7 710 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 BCANQ96GW7 911 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 PAPPAQ13219 1627 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 RREB1Q92766 1687 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 UBAP1LF5GYI3 381 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 ZNF772Q68DY9 489 aaPredicted RBP3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 SIN3AQ96ST3 1273 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 MRC1P22897 1456 aa3.75□□□□□ -1.81
RAB3IP-206ENST00000481897 GABBR2O75899 941 aa3.74□□□□□ -1.81
RAB3IP-206ENST00000481897 FNBP4Q8N3X1 1017 aaPredicted RBP3.74□□□□□ -1.81
RAB3IP-206ENST00000481897 COL3A1P02461 1466 aaPredicted RBP3.74□□□□□ -1.81
RAB3IP-206ENST00000481897 SHANK3Q9BYB0 1731 aa3.74□□□□□ -1.81
RAB3IP-206ENST00000481897 RGS12O14924 1447 aa3.74□□□□□ -1.81
RAB3IP-206ENST00000481897 FLT4P35916 1363 aa3.74□□□□□ -1.81
RAB3IP-206ENST00000481897 RALBP1Q15311 655 aa3.74□□□□□ -1.81
RAB3IP-206ENST00000481897 COL5A2P05997 1499 aaPredicted RBP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 NBPF1Q3BBV0 1214 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 BARGINQ6ZT62 677 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 MAP2P11137 1827 aaKnown RBP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 CRB1P82279 1406 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 ACEP12821 1306 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 C5P01031 1676 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 KRT28Q7Z3Y7 464 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 SGIP1Q9BQI5 828 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 PNNQ9H307 717 aaKnown RBP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 TRAK1Q9UPV9 953 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 SIPA1L3O60292 1781 aaPredicted RBP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 TNS2Q63HR2 1409 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 NSD3Q9BZ95 1437 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 TNS1Q9HBL0 1735 aaKnown RBP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 RGL2O15211 777 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 ONECUT3O60422 494 aaPredicted RBP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 HSPA5P11021 654 aaKnown RBP3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 C14orf37Q86TY3 774 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 KDM2AQ9Y2K7 1162 aa3.73□□□□□ -1.81
RAB3IP-206ENST00000481897 KDRP35968 1356 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 MAP3K5Q99683 1374 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 SOS1Q07889 1333 aaPredicted RBP3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 ST20-MTHFSA0A0A6YYL1 179 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 VPS72Q15906 364 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 CCDC125Q86Z20 511 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 COL26A1Q96A83 441 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 LAMB4A4D0S4 1761 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 SCN11AQ9UI33 1791 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 IBTKQ9P2D0 1353 aaPredicted RBP3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 LY75O60449 1722 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 KIF7Q2M1P5 1343 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 SBF2Q86WG5 1849 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 UBR2Q8IWV8 1755 aa3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 SRPK2P78362 688 aaKnown RBP3.72□□□□□ -1.81
RAB3IP-206ENST00000481897 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.81
RAB3IP-206ENST00000481897 NEUROD1Q13562 356 aa3.71□□□□□ -1.81
RAB3IP-206ENST00000481897 TMEM132EQ6IEE7 984 aa3.71□□□□□ -1.81
RAB3IP-206ENST00000481897 KRTAP4-6Q9BYQ5 205 aa3.71□□□□□ -1.81
RAB3IP-206ENST00000481897 BABAM1Q9NWV8 329 aa3.71□□□□□ -1.81
RAB3IP-206ENST00000481897 VIRMAQ69YN4 1812 aaKnown RBP3.71□□□□□ -1.82
RAB3IP-206ENST00000481897 MINK1Q8N4C8 1332 aaPredicted RBP3.71□□□□□ -1.82
RAB3IP-206ENST00000481897 WAPLQ7Z5K2 1190 aa3.71□□□□□ -1.82
RAB3IP-206ENST00000481897 NGDNQ8NEJ9 315 aaKnown RBP3.71□□□□□ -1.82
RAB3IP-206ENST00000481897 BCL9LQ86UU0 1499 aa3.71□□□□□ -1.82
RAB3IP-206ENST00000481897 ARHGEF25Q86VW2 580 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 COG3Q96JB2 828 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 CHMP4AQ9BY43 222 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 TRPC5Q9UL62 973 aaPredicted RBP3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 WDR17Q8IZU2 1322 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 RGPD5Q99666 1765 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 HTATSF1O43719 755 aaKnown RBP3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 ESCO1Q5FWF5 840 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 SLC51AQ86UW1 340 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 IP6K1Q92551 441 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 NGLY1Q96IV0 654 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 CARD10Q9BWT7 1032 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 FARP1Q9Y4F1 1045 aaPredicted RBP3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 N4BP2Q86UW6 1770 aaPredicted RBP3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 MAP3K19Q56UN5 1328 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 PER1O15534 1290 aaPredicted RBP3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 CACNA1FO60840 1977 aa3.7□□□□□ -1.82
RAB3IP-206ENST00000481897 KDM3BQ7LBC6 1761 aa3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 AMER1Q5JTC6 1135 aaPredicted RBP3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 SLC39A7Q92504 469 aa3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 STK26Q9P289 416 aa3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 ATF5Q9Y2D1 282 aaPredicted RBP3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 KNSTRNQ9Y448 316 aa3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 SPATA31A5Q5VU36 1347 aa3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 SPATA31A7Q8IWB4 1347 aa3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 CCER2I3L3R5 266 aa3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 HSP90AB1P08238 724 aaKnown RBP3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 RBM6P78332 1123 aaKnown RBP3.69□□□□□ -1.82
RAB3IP-206ENST00000481897 UNC5CLQ8IV45 518 aa3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms