RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 SYMPKQ92797 1274 aaKnown RBP8.74□□□□□ -1.01
COPA-204ENST00000481522 GUCA2AQ02747 115 aa8.73□□□□□ -1.01
COPA-204ENST00000481522 ARTNQ5T4W7 220 aa8.73□□□□□ -1.01
COPA-204ENST00000481522 RETREG3Q86VR2 466 aa8.73□□□□□ -1.01
COPA-204ENST00000481522 ACDQ96AP0 544 aa8.73□□□□□ -1.01
COPA-204ENST00000481522 ZFP64Q9NPA5 681 aa8.73□□□□□ -1.01
COPA-204ENST00000481522 SENP3-EIF4A1A0A087X0R7 540 aa8.72□□□□□ -1.01
COPA-204ENST00000481522 SPTLC1O15269 473 aa8.72□□□□□ -1.01
COPA-204ENST00000481522 MDM2Q00987 491 aaPredicted RBP8.72□□□□□ -1.01
COPA-204ENST00000481522 MAP2K5Q13163 448 aa8.72□□□□□ -1.01
COPA-204ENST00000481522 IGF1RP08069 1367 aa8.72□□□□□ -1.01
COPA-204ENST00000481522 MBIPQ9NS73 344 aa8.71□□□□□ -1.02
COPA-204ENST00000481522 C1QTNF9BB2RNN3 333 aa8.7□□□□□ -1.02
COPA-204ENST00000481522 COBLO75128 1261 aa8.7□□□□□ -1.02
COPA-204ENST00000481522 EVA1BQ9NVM1 165 aa8.7□□□□□ -1.02
COPA-204ENST00000481522 CUEDC1Q9NWM3 386 aaPredicted RBP8.7□□□□□ -1.02
COPA-204ENST00000481522 ARID5BQ14865 1188 aa8.69□□□□□ -1.02
COPA-204ENST00000481522 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.69□□□□□ -1.02
COPA-204ENST00000481522 LRRC4BQ9NT99 713 aa8.69□□□□□ -1.02
COPA-204ENST00000481522 IRF6O14896 467 aa8.68□□□□□ -1.02
COPA-204ENST00000481522 MS4A1P11836 297 aa8.68□□□□□ -1.02
COPA-204ENST00000481522 SPINT1O43278 529 aa8.67□□□□□ -1.02
COPA-204ENST00000481522 CD163Q86VB7 1156 aa8.67□□□□□ -1.02
COPA-204ENST00000481522 NUTM1Q86Y26 1132 aa8.67□□□□□ -1.02
COPA-204ENST00000481522 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
COPA-204ENST00000481522 PTPRNQ16849 979 aa8.66□□□□□ -1.02
COPA-204ENST00000481522 MINK1Q8N4C8 1332 aaPredicted RBP8.65□□□□□ -1.02
COPA-204ENST00000481522 C6orf229H3BNL8 230 aa8.65□□□□□ -1.02
COPA-204ENST00000481522 FDX1P10109 184 aa8.64□□□□□ -1.03
COPA-204ENST00000481522 CHRNA4P43681 627 aa8.64□□□□□ -1.03
COPA-204ENST00000481522 DOC2BQ14184 412 aa8.64□□□□□ -1.03
COPA-204ENST00000481522 GPCPD1Q9NPB8 672 aa8.64□□□□□ -1.03
COPA-204ENST00000481522 FAM217BQ9NTX9 383 aaPredicted RBP8.64□□□□□ -1.03
COPA-204ENST00000481522 CLCN1P35523 988 aa8.63□□□□□ -1.03
COPA-204ENST00000481522 NBPF11Q86T75 865 aa8.63□□□□□ -1.03
COPA-204ENST00000481522 MKL2Q9ULH7 1088 aa8.63□□□□□ -1.03
COPA-204ENST00000481522 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
COPA-204ENST00000481522 OIP5O43482 229 aa8.62□□□□□ -1.03
COPA-204ENST00000481522 FOXJ1Q92949 421 aa8.62□□□□□ -1.03
COPA-204ENST00000481522 C4orf48Q5BLP8 95 aa8.6□□□□□ -1.03
COPA-204ENST00000481522 CCDC102AQ96A19 550 aa8.6□□□□□ -1.03
COPA-204ENST00000481522 SUV39H2Q9H5I1 410 aa8.6□□□□□ -1.03
COPA-204ENST00000481522 CTSOP43234 321 aaPredicted RBP8.59□□□□□ -1.03
COPA-204ENST00000481522 GRIN2CQ14957 1233 aa8.59□□□□□ -1.03
COPA-204ENST00000481522 KRI1Q8N9T8 703 aaKnown RBP8.59□□□□□ -1.03
COPA-204ENST00000481522 ARID1BQ8NFD5 2236 aaPredicted RBP8.59□□□□□ -1.03
COPA-204ENST00000481522 ZC3H15Q8WU90 426 aaKnown RBP8.58□□□□□ -1.04
COPA-204ENST00000481522 GPR25O00155 361 aa8.57□□□□□ -1.04
COPA-204ENST00000481522 Q6ZVU0 165 aa8.57□□□□□ -1.04
COPA-204ENST00000481522 ZNF837Q96EG3 531 aaPredicted RBP8.57□□□□□ -1.04
COPA-204ENST00000481522 KRTAP4-11Q9BYQ6 195 aa8.57□□□□□ -1.04
COPA-204ENST00000481522 SHISA8B8ZZ34 492 aa8.56□□□□□ -1.04
COPA-204ENST00000481522 FSHRP23945 695 aa8.56□□□□□ -1.04
COPA-204ENST00000481522 CBLBQ13191 982 aa8.56□□□□□ -1.04
COPA-204ENST00000481522 DESI1Q6ICB0 168 aa8.56□□□□□ -1.04
COPA-204ENST00000481522 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
COPA-204ENST00000481522 EMILIN1Q9Y6C2 1016 aa8.56□□□□□ -1.04
COPA-204ENST00000481522 RSPO4Q2I0M5 234 aaPredicted RBP8.55□□□□□ -1.04
COPA-204ENST00000481522 RNF217Q8TC41 542 aa8.55□□□□□ -1.04
COPA-204ENST00000481522 SPDYE5A6NIY4 337 aa8.54□□□□□ -1.04
COPA-204ENST00000481522 YBX3P16989 372 aaKnown RBP eCLIP8.54□□□□□ -1.045e-11■■□□□ 12.8
COPA-204ENST00000481522 ZMYND10O75800 440 aa8.53□□□□□ -1.04
COPA-204ENST00000481522 HOXB4P17483 251 aaPredicted RBP8.53□□□□□ -1.04
COPA-204ENST00000481522 NDUFV2P19404 249 aa8.53□□□□□ -1.04
COPA-204ENST00000481522 MTMR2Q13614 643 aa8.53□□□□□ -1.04
COPA-204ENST00000481522 LINC00114Q6XXX2 140 aa8.53□□□□□ -1.04
COPA-204ENST00000481522 SPIRE2Q8WWL2 714 aa8.53□□□□□ -1.04
COPA-204ENST00000481522 KRTAP4-5Q9BYR2 181 aa8.52□□□□□ -1.05
COPA-204ENST00000481522 MOXD2PA6NHM9 499 aa8.51□□□□□ -1.05
COPA-204ENST00000481522 SSTR3P32745 418 aaPredicted RBP8.51□□□□□ -1.05
COPA-204ENST00000481522 CTHP32929 405 aa8.51□□□□□ -1.05
COPA-204ENST00000481522 NKAPLQ5M9Q1 402 aa8.51□□□□□ -1.05
COPA-204ENST00000481522 BARGINQ6ZT62 677 aa8.51□□□□□ -1.05
COPA-204ENST00000481522 LAMC2Q13753 1193 aa8.5□□□□□ -1.05
COPA-204ENST00000481522 MCTP1Q6DN14 999 aa8.5□□□□□ -1.05
COPA-204ENST00000481522 CCDC116Q8IYX3 515 aa8.5□□□□□ -1.05
COPA-204ENST00000481522 INSM2Q96T92 566 aaPredicted RBP8.5□□□□□ -1.05
COPA-204ENST00000481522 MAP4K5Q9Y4K4 846 aa8.5□□□□□ -1.05
COPA-204ENST00000481522 C1orf229Q6ZS94 237 aaPredicted RBP8.49□□□□□ -1.05
COPA-204ENST00000481522 LYPD8Q6UX82 237 aa8.48□□□□□ -1.05
COPA-204ENST00000481522 C1QTNF2Q9BXJ5 285 aa8.48□□□□□ -1.05
COPA-204ENST00000481522 TRIM22Q8IYM9 498 aa8.47□□□□□ -1.05
COPA-204ENST00000481522 LRP8Q14114 963 aa8.46□□□□□ -1.06
COPA-204ENST00000481522 GMCL1Q96IK5 515 aa8.46□□□□□ -1.06
COPA-204ENST00000481522 OXCT2Q9BYC2 517 aaPredicted RBP8.46□□□□□ -1.06
COPA-204ENST00000481522 GJA5P36382 358 aa8.44□□□□□ -1.06
COPA-204ENST00000481522 FZD5Q13467 585 aa8.44□□□□□ -1.06
COPA-204ENST00000481522 AGERQ15109 404 aa8.44□□□□□ -1.06
COPA-204ENST00000481522 DBN1Q16643 649 aa8.44□□□□□ -1.06
COPA-204ENST00000481522 AGBL1Q96MI9 1066 aa8.44□□□□□ -1.06
COPA-204ENST00000481522 RRAGCQ9HB90 399 aa8.44□□□□□ -1.06
COPA-204ENST00000481522 POLMQ9NP87 494 aaPredicted RBP8.44□□□□□ -1.06
COPA-204ENST00000481522 MAP10Q9P2G4 905 aa8.44□□□□□ -1.06
COPA-204ENST00000481522 DYRK3O43781 588 aa8.43□□□□□ -1.06
COPA-204ENST00000481522 F12P00748 615 aaPredicted RBP8.43□□□□□ -1.06
COPA-204ENST00000481522 PPP1R26Q5T8A7 1209 aaPredicted RBP8.43□□□□□ -1.06
COPA-204ENST00000481522 FOXD4L5Q5VV16 416 aaPredicted RBP8.43□□□□□ -1.06
COPA-204ENST00000481522 KRTAP5-3Q6L8H2 238 aa8.43□□□□□ -1.06
COPA-204ENST00000481522 BPHLQ86WA6 291 aaPredicted RBP8.43□□□□□ -1.06
COPA-204ENST00000481522 AK7Q96M32 723 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms