RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 WIPF1O43516 503 aa7.84□□□□□ -1.15
CBX3-207ENST00000481300 ARHGAP9Q9BRR9 750 aa7.84□□□□□ -1.15
CBX3-207ENST00000481300 SOBPA7XYQ1 873 aa7.83□□□□□ -1.16
CBX3-207ENST00000481300 USP17L8P0C7I0 530 aa7.83□□□□□ -1.16
CBX3-207ENST00000481300 RFC5P40937 340 aa7.83□□□□□ -1.16
CBX3-207ENST00000481300 MEIOBQ8N635 442 aa7.83□□□□□ -1.16
CBX3-207ENST00000481300 ZC3H4Q9UPT8 1303 aaKnown RBP7.82□□□□□ -1.16
CBX3-207ENST00000481300 VEGFBP49765 207 aa7.82□□□□□ -1.16
CBX3-207ENST00000481300 C6orf118Q5T5N4 469 aa7.82□□□□□ -1.16
CBX3-207ENST00000481300 CCDC116Q8IYX3 515 aa7.82□□□□□ -1.16
CBX3-207ENST00000481300 LINC00528Q8N1L1 170 aa7.81□□□□□ -1.16
CBX3-207ENST00000481300 EMILIN1Q9Y6C2 1016 aa7.81□□□□□ -1.16
CBX3-207ENST00000481300 PPP1R26Q5T8A7 1209 aaPredicted RBP7.8□□□□□ -1.16
CBX3-207ENST00000481300 NPAS3Q8IXF0 933 aa7.8□□□□□ -1.16
CBX3-207ENST00000481300 SLC10A4Q96EP9 437 aa7.8□□□□□ -1.16
CBX3-207ENST00000481300 H3BM21 787 aa7.79□□□□□ -1.16
CBX3-207ENST00000481300 PTK2Q05397 1052 aa7.79□□□□□ -1.16
CBX3-207ENST00000481300 ZBTB33Q86T24 672 aa7.79□□□□□ -1.16
CBX3-207ENST00000481300 C14orf37Q86TY3 774 aa7.79□□□□□ -1.16
CBX3-207ENST00000481300 ADAM32Q8TC27 787 aa7.79□□□□□ -1.16
CBX3-207ENST00000481300 SLC16A10Q8TF71 515 aa7.79□□□□□ -1.16
CBX3-207ENST00000481300 KCTD15Q96SI1 283 aaPredicted RBP7.79□□□□□ -1.16
CBX3-207ENST00000481300 GPSM3Q9Y4H4 160 aa7.79□□□□□ -1.16
CBX3-207ENST00000481300 ERBB4Q15303 1308 aa7.78□□□□□ -1.16
CBX3-207ENST00000481300 BMP2P12643 396 aa7.78□□□□□ -1.16
CBX3-207ENST00000481300 TRIM34Q9BYJ4 488 aa7.78□□□□□ -1.16
CBX3-207ENST00000481300 GMPRP36959 345 aa7.77□□□□□ -1.17
CBX3-207ENST00000481300 CBLBQ13191 982 aa7.77□□□□□ -1.17
CBX3-207ENST00000481300 INTS6LQ5JSJ4 861 aaKnown RBP7.77□□□□□ -1.17
CBX3-207ENST00000481300 CDV3Q9UKY7 258 aaKnown RBP7.77□□□□□ -1.17
CBX3-207ENST00000481300 SOS2Q07890 1332 aaPredicted RBP7.77□□□□□ -1.17
CBX3-207ENST00000481300 MAN1A2O60476 641 aa7.76□□□□□ -1.17
CBX3-207ENST00000481300 UPP2O95045 317 aa7.76□□□□□ -1.17
CBX3-207ENST00000481300 INSM1Q01101 510 aaPredicted RBP7.76□□□□□ -1.17
CBX3-207ENST00000481300 IRF7Q92985 503 aa7.76□□□□□ -1.17
CBX3-207ENST00000481300 TSEN34Q9BSV6 310 aaKnown RBP7.76□□□□□ -1.17
CBX3-207ENST00000481300 TIMELESSQ9UNS1 1208 aa7.76□□□□□ -1.17
CBX3-207ENST00000481300 TMEM259Q4ZIN3 620 aa7.75□□□□□ -1.17
CBX3-207ENST00000481300 Q6ZVU0 165 aa7.75□□□□□ -1.17
CBX3-207ENST00000481300 PGPEP1Q9NXJ5 209 aa7.75□□□□□ -1.17
CBX3-207ENST00000481300 DNMT3LQ9UJW3 386 aa7.75□□□□□ -1.17
CBX3-207ENST00000481300 PNMA1Q8ND90 353 aa7.74□□□□□ -1.17
CBX3-207ENST00000481300 DHX9Q08211 1270 aaKnown RBP7.73□□□□□ -1.17
CBX3-207ENST00000481300 GJD4Q96KN9 370 aaPredicted RBP7.73□□□□□ -1.17
CBX3-207ENST00000481300 STK17AQ9UEE5 414 aa7.73□□□□□ -1.17
CBX3-207ENST00000481300 LORP23490 312 aaPredicted RBP7.72□□□□□ -1.17
CBX3-207ENST00000481300 FLIIQ13045 1269 aa7.72□□□□□ -1.17
CBX3-207ENST00000481300 NBPF20Q3BBV1 942 aa7.72□□□□□ -1.17
CBX3-207ENST00000481300 TMPRSS4Q9NRS4 437 aa7.72□□□□□ -1.17
CBX3-207ENST00000481300 TTLL8A6PVC2 850 aa7.71□□□□□ -1.18
CBX3-207ENST00000481300 SPINT1O43278 529 aa7.71□□□□□ -1.18
CBX3-207ENST00000481300 VSIG8P0DPA2 414 aa7.71□□□□□ -1.18
CBX3-207ENST00000481300 AGBL1Q96MI9 1066 aa7.71□□□□□ -1.18
CBX3-207ENST00000481300 ESPNB1AK53 854 aa7.7□□□□□ -1.18
CBX3-207ENST00000481300 PPFIA3O75145 1194 aa7.7□□□□□ -1.18
CBX3-207ENST00000481300 RAB15P59190 212 aa7.7□□□□□ -1.18
CBX3-207ENST00000481300 DZIP3Q86Y13 1208 aaKnown RBP7.7□□□□□ -1.18
CBX3-207ENST00000481300 ZNF784Q8NCA9 323 aaPredicted RBP7.7□□□□□ -1.18
CBX3-207ENST00000481300 ERVH48-1M5A8F1 160 aa7.69□□□□□ -1.18
CBX3-207ENST00000481300 FIGNL2A6NMB9 653 aa7.68□□□□□ -1.18
CBX3-207ENST00000481300 ZBBXA8MT70 800 aa7.68□□□□□ -1.18
CBX3-207ENST00000481300 LILRA1O75019 489 aa7.68□□□□□ -1.18
CBX3-207ENST00000481300 FBXO45P0C2W1 286 aa7.68□□□□□ -1.18
CBX3-207ENST00000481300 RELBQ01201 579 aa7.68□□□□□ -1.18
CBX3-207ENST00000481300 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.68□□□□□ -1.185e-25■□□□□ 10.5
CBX3-207ENST00000481300 GPR37L1O60883 481 aa7.67□□□□□ -1.18
CBX3-207ENST00000481300 ADD1P35611 737 aaKnown RBP7.67□□□□□ -1.18
CBX3-207ENST00000481300 CTSOP43234 321 aaPredicted RBP7.67□□□□□ -1.18
CBX3-207ENST00000481300 PTSQ03393 145 aa7.67□□□□□ -1.18
CBX3-207ENST00000481300 KDF1Q8NAX2 398 aaPredicted RBP7.67□□□□□ -1.18
CBX3-207ENST00000481300 INSM2Q96T92 566 aaPredicted RBP7.67□□□□□ -1.18
CBX3-207ENST00000481300 ZSCAN1Q8NBB4 408 aa7.66□□□□□ -1.18
CBX3-207ENST00000481300 MTMR14Q8NCE2 650 aa7.66□□□□□ -1.18
CBX3-207ENST00000481300 ZNF395Q9H8N7 513 aaPredicted RBP7.66□□□□□ -1.18
CBX3-207ENST00000481300 ADH1AP07327 375 aa7.65□□□□□ -1.18
CBX3-207ENST00000481300 SEPT12Q8IYM1 358 aa7.65□□□□□ -1.18
CBX3-207ENST00000481300 BANK1Q8NDB2 785 aa7.65□□□□□ -1.18
CBX3-207ENST00000481300 PCDHB9Q9Y5E1 797 aa7.65□□□□□ -1.18
CBX3-207ENST00000481300 GIGYF1O75420 1035 aaPredicted RBP7.64□□□□□ -1.19
CBX3-207ENST00000481300 MCM6Q14566 821 aa7.64□□□□□ -1.19
CBX3-207ENST00000481300 SNRKQ9NRH2 765 aa7.64□□□□□ -1.19
CBX3-207ENST00000481300 SOCS7O14512 581 aa7.63□□□□□ -1.19
CBX3-207ENST00000481300 UBTFP17480 764 aaKnown RBP7.63□□□□□ -1.19
CBX3-207ENST00000481300 RNF217Q8TC41 542 aa7.63□□□□□ -1.19
CBX3-207ENST00000481300 POLMQ9NP87 494 aaPredicted RBP7.63□□□□□ -1.19
CBX3-207ENST00000481300 CYLDQ9NQC7 956 aa7.63□□□□□ -1.19
CBX3-207ENST00000481300 SLC35F4A4IF30 521 aa7.62□□□□□ -1.19
CBX3-207ENST00000481300 PTGIRP43119 386 aa7.62□□□□□ -1.19
CBX3-207ENST00000481300 FOXD4L5Q5VV16 416 aaPredicted RBP7.62□□□□□ -1.19
CBX3-207ENST00000481300 CCDC155Q8N6L0 562 aa7.62□□□□□ -1.19
CBX3-207ENST00000481300 GPR161Q8N6U8 529 aaKnown RBP7.62□□□□□ -1.19
CBX3-207ENST00000481300 ZMYND15Q9H091 742 aa7.62□□□□□ -1.19
CBX3-207ENST00000481300 APBB1O00213 710 aa7.61□□□□□ -1.19
CBX3-207ENST00000481300 KRT76Q01546 638 aa7.61□□□□□ -1.19
CBX3-207ENST00000481300 NR1H3Q13133 447 aa7.61□□□□□ -1.19
CBX3-207ENST00000481300 SENP3-EIF4A1A0A087X0R7 540 aa7.6□□□□□ -1.19
CBX3-207ENST00000481300 RAD21O60216 631 aa7.6□□□□□ -1.19
CBX3-207ENST00000481300 NDUFB9Q9Y6M9 179 aa7.6□□□□□ -1.19
CBX3-207ENST00000481300 NANOS1Q8WY41 292 aaKnown RBP7.59□□□□□ -1.19
CBX3-207ENST00000481300 PRM3Q9NNZ6 103 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms