RNA–Protein interactions for RNA: ENST00000481231.5

SMARCE1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-210ENST00000481231 ZBTB7CA1YPR0 619 aa13.9□□□□□ -0.18
SMARCE1-210ENST00000481231 NUDT16Q96DE0 195 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-210ENST00000481231 RAB3GAP2Q9H2M9 1393 aa13.89□□□□□ -0.19
SMARCE1-210ENST00000481231 ABTB2Q8N961 1025 aa13.89□□□□□ -0.19
SMARCE1-210ENST00000481231 ITSN1Q15811 1721 aa13.88□□□□□ -0.19
SMARCE1-210ENST00000481231 ACEP12821 1306 aa13.88□□□□□ -0.19
SMARCE1-210ENST00000481231 POLR3AO14802 1390 aaPredicted RBP13.87□□□□□ -0.19
SMARCE1-210ENST00000481231 GCP02774 474 aa13.87□□□□□ -0.19
SMARCE1-210ENST00000481231 TOM1L2Q6ZVM7 507 aa13.86□□□□□ -0.19
SMARCE1-210ENST00000481231 BCL9O00512 1426 aa13.86□□□□□ -0.19
SMARCE1-210ENST00000481231 PAPPAQ13219 1627 aa13.86□□□□□ -0.19
SMARCE1-210ENST00000481231 AATKQ6ZMQ8 1374 aa13.85□□□□□ -0.19
SMARCE1-210ENST00000481231 ATP10DQ9P241 1426 aa13.85□□□□□ -0.19
SMARCE1-210ENST00000481231 ZNF827Q17R98 1081 aa13.85□□□□□ -0.19
SMARCE1-210ENST00000481231 NLGN2Q8NFZ4 835 aa13.85□□□□□ -0.19
SMARCE1-210ENST00000481231 HSPA6P17066 643 aa13.84□□□□□ -0.19
SMARCE1-210ENST00000481231 WNK3Q9BYP7 1800 aa13.84□□□□□ -0.19
SMARCE1-210ENST00000481231 TOPAZ1Q8N9V7 1692 aa13.84□□□□□ -0.19
SMARCE1-210ENST00000481231 YBX3P16989 372 aaKnown RBP eCLIP13.83□□□□□ -0.22e-7■■□□□ 12.5
SMARCE1-210ENST00000481231 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
SMARCE1-210ENST00000481231 AKAP12Q02952 1782 aa13.83□□□□□ -0.2
SMARCE1-210ENST00000481231 NLRP13Q86W25 1043 aa13.82□□□□□ -0.2
SMARCE1-210ENST00000481231 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
SMARCE1-210ENST00000481231 CDK19Q9BWU1 502 aa13.82□□□□□ -0.2
SMARCE1-210ENST00000481231 ACSBG1Q96GR2 724 aa13.81□□□□□ -0.2
SMARCE1-210ENST00000481231 ZNF526Q8TF50 670 aaPredicted RBP13.8□□□□□ -0.2
SMARCE1-210ENST00000481231 AXIN2Q9Y2T1 843 aa13.8□□□□□ -0.2
SMARCE1-210ENST00000481231 WDR17Q8IZU2 1322 aa13.8□□□□□ -0.2
SMARCE1-210ENST00000481231 ARHGEF28Q8N1W1 1705 aaKnown RBP13.79□□□□□ -0.2
SMARCE1-210ENST00000481231 POLD1P28340 1107 aa13.79□□□□□ -0.2
SMARCE1-210ENST00000481231 GPBP1L1Q9HC44 474 aaPredicted RBP13.79□□□□□ -0.2
SMARCE1-210ENST00000481231 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
SMARCE1-210ENST00000481231 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
SMARCE1-210ENST00000481231 PLEKHG3A1L390 1219 aa13.78□□□□□ -0.2
SMARCE1-210ENST00000481231 CDCA7Q9BWT1 371 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-210ENST00000481231 LRRC4BQ9NT99 713 aa13.78□□□□□ -0.2
SMARCE1-210ENST00000481231 SLIT3O75094 1523 aa13.77□□□□□ -0.21
SMARCE1-210ENST00000481231 TNS2Q63HR2 1409 aa13.77□□□□□ -0.21
SMARCE1-210ENST00000481231 STAC3Q96MF2 364 aa13.77□□□□□ -0.21
SMARCE1-210ENST00000481231 COL18A1P39060 1754 aa13.76□□□□□ -0.21
SMARCE1-210ENST00000481231 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
SMARCE1-210ENST00000481231 EXOC5O00471 708 aa13.76□□□□□ -0.21
SMARCE1-210ENST00000481231 GRIN3BO60391 1043 aa13.76□□□□□ -0.21
SMARCE1-210ENST00000481231 CPSF1Q10570 1443 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-210ENST00000481231 BRD4O60885 1362 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-210ENST00000481231 CAPN15O75808 1086 aa13.75□□□□□ -0.21
SMARCE1-210ENST00000481231 CSB-PGBD3P0DP91 1061 aa13.75□□□□□ -0.21
SMARCE1-210ENST00000481231 NLRP6P59044 892 aa13.75□□□□□ -0.21
SMARCE1-210ENST00000481231 AKT1S1Q96B36 256 aa13.75□□□□□ -0.21
SMARCE1-210ENST00000481231 USP6P35125 1406 aa13.74□□□□□ -0.21
SMARCE1-210ENST00000481231 PPIP5K1Q6PFW1 1433 aa13.74□□□□□ -0.21
SMARCE1-210ENST00000481231 ADCY9O60503 1353 aa13.74□□□□□ -0.21
SMARCE1-210ENST00000481231 CARD10Q9BWT7 1032 aa13.74□□□□□ -0.21
SMARCE1-210ENST00000481231 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
SMARCE1-210ENST00000481231 COL24A1Q17RW2 1714 aa13.73□□□□□ -0.21
SMARCE1-210ENST00000481231 BTAF1O14981 1849 aa13.72□□□□□ -0.21
SMARCE1-210ENST00000481231 SOX12O15370 315 aa13.72□□□□□ -0.21
SMARCE1-210ENST00000481231 KCNQ4P56696 695 aa13.72□□□□□ -0.21
SMARCE1-210ENST00000481231 ABCC6O95255 1503 aa13.72□□□□□ -0.21
SMARCE1-210ENST00000481231 TRPM1Q7Z4N2 1603 aa13.71□□□□□ -0.22
SMARCE1-210ENST00000481231 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
SMARCE1-210ENST00000481231 TFCP2L1Q9NZI6 479 aa13.7□□□□□ -0.22
SMARCE1-210ENST00000481231 CCDC7Q96M83 1385 aa13.7□□□□□ -0.22
SMARCE1-210ENST00000481231 TUBGCP6Q96RT7 1819 aa13.69□□□□□ -0.22
SMARCE1-210ENST00000481231 SRPK2P78362 688 aaKnown RBP13.69□□□□□ -0.22
SMARCE1-210ENST00000481231 COL13A1Q5TAT6 717 aaPredicted RBP13.69□□□□□ -0.22
SMARCE1-210ENST00000481231 ARHGEF25Q86VW2 580 aa13.69□□□□□ -0.22
SMARCE1-210ENST00000481231 CABP2Q9NPB3 220 aa13.69□□□□□ -0.22
SMARCE1-210ENST00000481231 QSER1Q2KHR3 1735 aa13.69□□□□□ -0.22
SMARCE1-210ENST00000481231 RGPD5Q99666 1765 aa13.68□□□□□ -0.22
SMARCE1-210ENST00000481231 KIF3CO14782 793 aa13.68□□□□□ -0.22
SMARCE1-210ENST00000481231 MSL1Q68DK7 614 aa13.68□□□□□ -0.22
SMARCE1-210ENST00000481231 APLP1P51693 650 aa13.67□□□□□ -0.22
SMARCE1-210ENST00000481231 DNAJC5GQ8N7S2 189 aa13.67□□□□□ -0.22
SMARCE1-210ENST00000481231 WWC3Q9ULE0 1092 aa13.67□□□□□ -0.22
SMARCE1-210ENST00000481231 NBPF1Q3BBV0 1214 aa13.66□□□□□ -0.22
SMARCE1-210ENST00000481231 CABP1Q9NZU7 370 aa13.66□□□□□ -0.22
SMARCE1-210ENST00000481231 MSH5O43196 834 aa13.65□□□□□ -0.22
SMARCE1-210ENST00000481231 SLC27A3Q5K4L6 730 aa13.65□□□□□ -0.22
SMARCE1-210ENST00000481231 NFAT5O94916 1531 aa13.64□□□□□ -0.23
SMARCE1-210ENST00000481231 IL2RBP14784 551 aa13.63□□□□□ -0.23
SMARCE1-210ENST00000481231 NLRP2Q9NX02 1062 aa13.63□□□□□ -0.23
SMARCE1-210ENST00000481231 CENPJQ9HC77 1338 aaPredicted RBP13.63□□□□□ -0.23
SMARCE1-210ENST00000481231 QRICH2Q9H0J4 1663 aa13.63□□□□□ -0.23
SMARCE1-210ENST00000481231 KIAA1210Q9ULL0 1709 aa13.62□□□□□ -0.23
SMARCE1-210ENST00000481231 COL23A1Q86Y22 540 aaPredicted RBP13.62□□□□□ -0.23
SMARCE1-210ENST00000481231 KCNH5Q8NCM2 988 aa13.62□□□□□ -0.23
SMARCE1-210ENST00000481231 HTRA3P83110 453 aa13.61□□□□□ -0.23
SMARCE1-210ENST00000481231 TNS4Q8IZW8 715 aa13.61□□□□□ -0.23
SMARCE1-210ENST00000481231 SYTL4Q96C24 671 aaPredicted RBP13.61□□□□□ -0.23
SMARCE1-210ENST00000481231 ERBB3P21860 1342 aa13.61□□□□□ -0.23
SMARCE1-210ENST00000481231 PRELPP51888 382 aa13.6□□□□□ -0.23
SMARCE1-210ENST00000481231 CD2APQ9Y5K6 639 aa13.6□□□□□ -0.23
SMARCE1-210ENST00000481231 TTC21BQ7Z4L5 1316 aa13.6□□□□□ -0.23
SMARCE1-210ENST00000481231 DDX54Q8TDD1 881 aaKnown RBP13.59□□□□□ -0.23
SMARCE1-210ENST00000481231 NSD2O96028 1365 aa13.58□□□□□ -0.23
SMARCE1-210ENST00000481231 CCNL1Q9UK58 526 aaPredicted RBP13.58□□□□□ -0.24
SMARCE1-210ENST00000481231 IGSF1Q8N6C5 1336 aa13.58□□□□□ -0.24
SMARCE1-210ENST00000481231 TOMM70O94826 608 aa13.57□□□□□ -0.24
SMARCE1-210ENST00000481231 PRIM1P49642 420 aaKnown RBP13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms