RNA–Protein interactions for RNA: ENST00000481077.6

CNKSR1-206, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 865 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-206ENST00000481077 COL18A1P39060 1754 aa21.34■■□□□ 1.01
CNKSR1-206ENST00000481077 COL5A2P05997 1499 aaPredicted RBP21.33■■□□□ 1.01
CNKSR1-206ENST00000481077 PER1O15534 1290 aaPredicted RBP21.33■■□□□ 1.01
CNKSR1-206ENST00000481077 AXIN2Q9Y2T1 843 aa21.33■■□□□ 1.01
CNKSR1-206ENST00000481077 ANKRD26Q9UPS8 1709 aa21.32■■□□□ 1
CNKSR1-206ENST00000481077 FBLN1P23142 703 aa21.32■■□□□ 1
CNKSR1-206ENST00000481077 MAP3K19Q56UN5 1328 aa21.31■■□□□ 1
CNKSR1-206ENST00000481077 AMPHP49418 695 aa21.31■■□□□ 1
CNKSR1-206ENST00000481077 RRS1Q15050 365 aaKnown RBP21.31■■□□□ 1
CNKSR1-206ENST00000481077 AMER1Q5JTC6 1135 aaPredicted RBP21.31■■□□□ 1
CNKSR1-206ENST00000481077 LARP1Q6PKG0 1096 aaKnown RBP21.3■■□□□ 1
CNKSR1-206ENST00000481077 CDK12Q9NYV4 1490 aaPredicted RBP21.3■■□□□ 1
CNKSR1-206ENST00000481077 SPATA31A5Q5VU36 1347 aa21.29■■□□□ 1
CNKSR1-206ENST00000481077 SPATA31A7Q8IWB4 1347 aa21.29■■□□□ 1
CNKSR1-206ENST00000481077 GLI3P10071 1580 aa21.29■■□□□ 1
CNKSR1-206ENST00000481077 MORC1Q86VD1 984 aa21.29■■□□□ 1
CNKSR1-206ENST00000481077 IP6K1Q92551 441 aa21.29■■□□□ 1
CNKSR1-206ENST00000481077 RGPD5Q99666 1765 aa21.28■■□□□ 1
CNKSR1-206ENST00000481077 CSB-PGBD3P0DP91 1061 aa21.28■■□□□ 1
CNKSR1-206ENST00000481077 TNNT2P45379 298 aaPredicted RBP21.28■■□□□ 1
CNKSR1-206ENST00000481077 BLMP54132 1417 aaPredicted RBP21.28■■□□□ 1
CNKSR1-206ENST00000481077 RTL1A6NKG5 1358 aa21.27■■□□□ 1
CNKSR1-206ENST00000481077 SPATA31A1Q5TZJ5 1347 aa21.27■□□□□ 0.99
CNKSR1-206ENST00000481077 WDR17Q8IZU2 1322 aa21.27■□□□□ 0.99
CNKSR1-206ENST00000481077 HOXC9P31274 260 aa21.26■□□□□ 0.99
CNKSR1-206ENST00000481077 CC2D1BQ5T0F9 858 aaKnown RBP21.26■□□□□ 0.99
CNKSR1-206ENST00000481077 TOM1L2Q6ZVM7 507 aa21.26■□□□□ 0.99
CNKSR1-206ENST00000481077 USP35Q9P2H5 1018 aa21.26■□□□□ 0.99
CNKSR1-206ENST00000481077 CRB1P82279 1406 aa21.26■□□□□ 0.99
CNKSR1-206ENST00000481077 KIF24Q5T7B8 1368 aa21.25■□□□□ 0.99
CNKSR1-206ENST00000481077 NPC1L1Q9UHC9 1359 aa21.25■□□□□ 0.99
CNKSR1-206ENST00000481077 RGS12O14924 1447 aa21.25■□□□□ 0.99
CNKSR1-206ENST00000481077 ANKRD24Q8TF21 1146 aa21.25■□□□□ 0.99
CNKSR1-206ENST00000481077 ERBB3P21860 1342 aa21.25■□□□□ 0.99
CNKSR1-206ENST00000481077 PPM1GO15355 546 aaPredicted RBP21.24■□□□□ 0.99
CNKSR1-206ENST00000481077 FAM98CQ17RN3 349 aaKnown RBP21.24■□□□□ 0.99
CNKSR1-206ENST00000481077 EMILIN1Q9Y6C2 1016 aa21.24■□□□□ 0.99
CNKSR1-206ENST00000481077 FLT4P35916 1363 aa21.23■□□□□ 0.99
CNKSR1-206ENST00000481077 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
CNKSR1-206ENST00000481077 TCP11L2Q8N4U5 519 aa21.23■□□□□ 0.99
CNKSR1-206ENST00000481077 A0A0G2JS52 829 aa21.22■□□□□ 0.99
CNKSR1-206ENST00000481077 ONECUT3O60422 494 aaPredicted RBP21.22■□□□□ 0.99
CNKSR1-206ENST00000481077 MYT1Q01538 1121 aa21.22■□□□□ 0.99
CNKSR1-206ENST00000481077 DDX10Q13206 875 aaKnown RBP21.22■□□□□ 0.99
CNKSR1-206ENST00000481077 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
CNKSR1-206ENST00000481077 POLKQ9UBT6 870 aa21.22■□□□□ 0.99
CNKSR1-206ENST00000481077 THRAP3Q9Y2W1 955 aaKnown RBP21.22■□□□□ 0.99
CNKSR1-206ENST00000481077 MAP2P11137 1827 aaKnown RBP21.21■□□□□ 0.99
CNKSR1-206ENST00000481077 CARD10Q9BWT7 1032 aa21.21■□□□□ 0.99
CNKSR1-206ENST00000481077 PEAK1Q9H792 1746 aa21.21■□□□□ 0.99
CNKSR1-206ENST00000481077 HSP90AB2PQ58FF8 381 aa21.2■□□□□ 0.98
CNKSR1-206ENST00000481077 BARGINQ6ZT62 677 aa21.2■□□□□ 0.98
CNKSR1-206ENST00000481077 SEPT12Q8IYM1 358 aa21.2■□□□□ 0.98
CNKSR1-206ENST00000481077 NLRP2Q9NX02 1062 aa21.2■□□□□ 0.98
CNKSR1-206ENST00000481077 INSRP06213 1382 aa21.2■□□□□ 0.98
CNKSR1-206ENST00000481077 SMG6Q86US8 1419 aaKnown RBP21.2■□□□□ 0.98
CNKSR1-206ENST00000481077 ZNF316A6NFI3 1004 aaPredicted RBP21.19■□□□□ 0.98
CNKSR1-206ENST00000481077 FAM208AQ9UK61 1670 aaKnown RBP21.18■□□□□ 0.98
CNKSR1-206ENST00000481077 THSD7AQ9UPZ6 1657 aa21.15■□□□□ 0.98
CNKSR1-206ENST00000481077 CDCA7Q9BWT1 371 aaPredicted RBP21.14■□□□□ 0.97
CNKSR1-206ENST00000481077 BRWD3Q6RI45 1802 aa21.11■□□□□ 0.97
CNKSR1-206ENST00000481077 MTHFSP49914 203 aa21.11■□□□□ 0.97
CNKSR1-206ENST00000481077 KRT27Q7Z3Y8 459 aa21.11■□□□□ 0.97
CNKSR1-206ENST00000481077 NBPF6Q5VWK0 638 aa21.1■□□□□ 0.97
CNKSR1-206ENST00000481077 NBPF4Q96M43 638 aa21.1■□□□□ 0.97
CNKSR1-206ENST00000481077 WNK3Q9BYP7 1800 aa21.1■□□□□ 0.97
CNKSR1-206ENST00000481077 SOCS7O14512 581 aa21.09■□□□□ 0.97
CNKSR1-206ENST00000481077 IL2RBP14784 551 aa21.09■□□□□ 0.97
CNKSR1-206ENST00000481077 RGPD2P0DJD1 1756 aa21.09■□□□□ 0.97
CNKSR1-206ENST00000481077 PARP4Q9UKK3 1724 aaKnown RBP21.09■□□□□ 0.97
CNKSR1-206ENST00000481077 DISP2A7MBM2 1401 aa21.08■□□□□ 0.97
CNKSR1-206ENST00000481077 PDE3BQ13370 1112 aa21.08■□□□□ 0.97
CNKSR1-206ENST00000481077 EIF4A2Q14240 407 aaKnown RBP21.08■□□□□ 0.97
CNKSR1-206ENST00000481077 DDB1Q16531 1140 aa21.08■□□□□ 0.97
CNKSR1-206ENST00000481077 USHBP1Q8N6Y0 703 aa21.06■□□□□ 0.96
CNKSR1-206ENST00000481077 LRRC37A3O60309 1634 aa21.05■□□□□ 0.96
CNKSR1-206ENST00000481077 PARD3Q8TEW0 1356 aa21.05■□□□□ 0.96
CNKSR1-206ENST00000481077 EP400Q96L91 3159 aa21.04■□□□□ 0.96
CNKSR1-206ENST00000481077 EXOC5O00471 708 aa21.04■□□□□ 0.96
CNKSR1-206ENST00000481077 PPP2R1AP30153 589 aa21.04■□□□□ 0.96
CNKSR1-206ENST00000481077 EYA1Q99502 592 aa21.04■□□□□ 0.96
CNKSR1-206ENST00000481077 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
CNKSR1-206ENST00000481077 RALBP1Q15311 655 aa21.02■□□□□ 0.96
CNKSR1-206ENST00000481077 CFAP53Q96M91 514 aa21.02■□□□□ 0.96
CNKSR1-206ENST00000481077 TNS2Q63HR2 1409 aa21.02■□□□□ 0.96
CNKSR1-206ENST00000481077 DIAPH1O60610 1272 aaKnown RBP21.01■□□□□ 0.95
CNKSR1-206ENST00000481077 IL13P35225 146 aa21.01■□□□□ 0.95
CNKSR1-206ENST00000481077 FAM182BQ5T319 152 aa21.01■□□□□ 0.95
CNKSR1-206ENST00000481077 NCAPD2Q15021 1401 aa21.01■□□□□ 0.95
CNKSR1-206ENST00000481077 TATP17735 454 aaPredicted RBP21■□□□□ 0.95
CNKSR1-206ENST00000481077 IGSF1Q8N6C5 1336 aa21■□□□□ 0.95
CNKSR1-206ENST00000481077 MEGF6O75095 1541 aa20.99■□□□□ 0.95
CNKSR1-206ENST00000481077 FAM196AQ6ZSG2 479 aa20.99■□□□□ 0.95
CNKSR1-206ENST00000481077 OVOS2A0A0G2JMS6 1433 aa20.98■□□□□ 0.95
CNKSR1-206ENST00000481077 UPF1Q92900 1129 aaKnown RBP eCLIP20.98■□□□□ 0.95
CNKSR1-206ENST00000481077 MARCH10Q8NA82 808 aaPredicted RBP20.97■□□□□ 0.95
CNKSR1-206ENST00000481077 ZCRB1Q8TBF4 217 aaKnown RBP20.97■□□□□ 0.95
CNKSR1-206ENST00000481077 COL3A1P02461 1466 aaPredicted RBP20.96■□□□□ 0.95
CNKSR1-206ENST00000481077 RGPD1P0DJD0 1748 aa20.95■□□□□ 0.94
CNKSR1-206ENST00000481077 SULT6B1Q6IMI4 303 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms