RNA–Protein interactions for RNA: ENST00000481038.5

GPCPD1-205, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 2

Gene GPCPD1, Length 6,649 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-205ENST00000481038 MIPOL1Q8TD10 442 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 SHROOM2Q13796 1616 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 HDAC1Q13547 482 aaPredicted RBP5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 CWC22Q9HCG8 908 aaKnown RBP5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 SMC4Q9NTJ3 1288 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 CCDC70Q6NSX1 233 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 RASSF8Q8NHQ8 419 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 USP47Q96K76 1375 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 KRI1Q8N9T8 703 aaKnown RBP5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 DNAJC5Q9H3Z4 198 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 PRM3Q9NNZ6 103 aa5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 ZCCHC11Q5TAX3 1644 aaKnown RBP5.44□□□□□ -1.54
GPCPD1-205ENST00000481038 NPHP1O15259 732 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 NAP1L4Q99733 375 aaKnown RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 CHMP5Q9NZZ3 219 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 MLH3Q9UHC1 1453 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 ADCY10Q96PN6 1610 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 TRAK2O60296 914 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 NEBLO76041 1014 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 MYCNP04198 464 aaPredicted RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 DMTNQ08495 405 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 FMNL3Q8IVF7 1028 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 GPRASP1Q5JY77 1395 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 ATAD2Q6PL18 1390 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 DBN1Q16643 649 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 CREBRFQ8IUR6 639 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 RPRD2Q5VT52 1461 aaKnown RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 ZNF692Q9BU19 519 aaPredicted RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 GBP2P32456 591 aaPredicted RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 MAP2K2P36507 400 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 FOXD1Q16676 465 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 FAM161AQ3B820 660 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 RNF20Q5VTR2 975 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 SENP3Q9H4L4 574 aaPredicted RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 NINLQ9Y2I6 1382 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 GOLGA6L7A0A1B0GV03 622 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 GBP6Q6ZN66 633 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 CEP120Q8N960 986 aa5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 ZNHIT6Q9NWK9 470 aaKnown RBP5.43□□□□□ -1.54
GPCPD1-205ENST00000481038 POLD1P28340 1107 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 SKIDA1Q1XH10 827 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 NBPF6Q5VWK0 638 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 NBPF5PQ86XG9 351 aaPredicted RBP5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 NUP133Q8WUM0 1156 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 NBPF4Q96M43 638 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 ADGBQ8N7X0 1667 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 APBB1O00213 710 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 ATP6V1AP38606 617 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 NEXNQ0ZGT2 675 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 TPD52L1Q16890 204 aaPredicted RBP5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 CAVIN1Q6NZI2 390 aaKnown RBP5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 CCDC112Q8NEF3 446 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 RABEP1Q15276 862 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 PREX2Q70Z35 1606 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 CCAR1Q8IX12 1150 aaKnown RBP5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 RPUSD2Q8IZ73 545 aaKnown RBP5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 RNF214Q8ND24 703 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 NUCKS1Q9H1E3 243 aaKnown RBP5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 U2SURPO15042 1029 aaKnown RBP5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 HOMER1Q86YM7 354 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 C10orf67Q8IYJ2 551 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 COG3Q96JB2 828 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 EFCC1Q9HA90 598 aa5.42□□□□□ -1.54
GPCPD1-205ENST00000481038 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 MICALCLQ6ZW33 695 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 ZNF513Q8N8E2 541 aaPredicted RBP5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 EIF3JO75822 258 aaKnown RBP5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 NLRP13Q86W25 1043 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 TRAK1Q9UPV9 953 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 LRPPRCP42704 1394 aaKnown RBP5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 EIF2AK4Q9P2K8 1649 aaKnown RBP5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 BIRC2Q13490 618 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 TMX1Q9H3N1 280 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 TRAPPC8Q9Y2L5 1435 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 PPP2R5AQ15172 486 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.41□□□□□ -1.541e-6■■■■□ 22.4
GPCPD1-205ENST00000481038 A0A1B0GUA9 196 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 GTF2E1P29083 439 aaPredicted RBP5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 KRT222Q8N1A0 295 aa5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 RTF1Q92541 710 aaKnown RBP5.41□□□□□ -1.54
GPCPD1-205ENST00000481038 IVLP07476 585 aa5.4□□□□□ -1.54
GPCPD1-205ENST00000481038 PROSER2Q86WR7 435 aaPredicted RBP5.4□□□□□ -1.54
GPCPD1-205ENST00000481038 RBBP5Q15291 538 aaKnown RBP5.4□□□□□ -1.54
GPCPD1-205ENST00000481038 TRIM63Q969Q1 353 aa5.4□□□□□ -1.54
GPCPD1-205ENST00000481038 GOPCQ9HD26 462 aa5.4□□□□□ -1.54
GPCPD1-205ENST00000481038 RSPH14Q9UHP6 348 aa5.4□□□□□ -1.54
GPCPD1-205ENST00000481038 ABCC1P33527 1531 aa5.4□□□□□ -1.54
GPCPD1-205ENST00000481038 TAX1BP1Q86VP1 789 aa5.4□□□□□ -1.55
GPCPD1-205ENST00000481038 ANKRD18AQ8IVF6 992 aa5.4□□□□□ -1.55
GPCPD1-205ENST00000481038 GLI2P10070 1586 aa5.4□□□□□ -1.55
GPCPD1-205ENST00000481038 GOLGA6L9A6NEM1 432 aa5.4□□□□□ -1.55
GPCPD1-205ENST00000481038 MAST1Q9Y2H9 1570 aa5.4□□□□□ -1.55
GPCPD1-205ENST00000481038 ARHGEF12Q9NZN5 1544 aa5.39□□□□□ -1.55
GPCPD1-205ENST00000481038 SHTN1A0MZ66 631 aa5.39□□□□□ -1.55
GPCPD1-205ENST00000481038 ZMAT2Q96NC0 199 aaKnown RBP5.39□□□□□ -1.55
GPCPD1-205ENST00000481038 HECW2Q9P2P5 1572 aa5.39□□□□□ -1.55
GPCPD1-205ENST00000481038 CSB-PGBD3P0DP91 1061 aa5.39□□□□□ -1.55
GPCPD1-205ENST00000481038 MFAP1P55081 439 aaKnown RBP5.39□□□□□ -1.55
GPCPD1-205ENST00000481038 PDE3BQ13370 1112 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms