RNA–Protein interactions for RNA: ENST00000480952.1

NDC1-202, Transcript of NDC1 transmembrane nucleoporin, humanhuman

TSL 3

Gene NDC1, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-202ENST00000480952 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
NDC1-202ENST00000480952 SLC15A2Q16348 729 aa19.42■□□□□ 0.7
NDC1-202ENST00000480952 NBPF1Q3BBV0 1214 aa19.42■□□□□ 0.7
NDC1-202ENST00000480952 SYT17Q9BSW7 474 aa19.42■□□□□ 0.7
NDC1-202ENST00000480952 FHDC1Q9C0D6 1143 aaPredicted RBP19.42■□□□□ 0.7
NDC1-202ENST00000480952 AXIN2Q9Y2T1 843 aa19.42■□□□□ 0.7
NDC1-202ENST00000480952 WDR17Q8IZU2 1322 aa19.42■□□□□ 0.7
NDC1-202ENST00000480952 CSB-PGBD3P0DP91 1061 aa19.41■□□□□ 0.7
NDC1-202ENST00000480952 RGPD3A6NKT7 1758 aaPredicted RBP19.4■□□□□ 0.7
NDC1-202ENST00000480952 RGPD4Q7Z3J3 1758 aa19.4■□□□□ 0.7
NDC1-202ENST00000480952 EXOC5O00471 708 aa19.4■□□□□ 0.7
NDC1-202ENST00000480952 CENPJQ9HC77 1338 aaPredicted RBP19.4■□□□□ 0.7
NDC1-202ENST00000480952 MTFR1LQ9H019 292 aa19.39■□□□□ 0.69
NDC1-202ENST00000480952 BCL9O00512 1426 aa19.39■□□□□ 0.69
NDC1-202ENST00000480952 LRRC37A3O60309 1634 aa19.39■□□□□ 0.69
NDC1-202ENST00000480952 CASZ1Q86V15 1759 aa19.39■□□□□ 0.69
NDC1-202ENST00000480952 SENP3-EIF4A1A0A087X0R7 540 aa19.38■□□□□ 0.69
NDC1-202ENST00000480952 USP6P35125 1406 aa19.38■□□□□ 0.69
NDC1-202ENST00000480952 CARD10Q9BWT7 1032 aa19.38■□□□□ 0.69
NDC1-202ENST00000480952 UTRNP46939 3433 aa19.38■□□□□ 0.69
NDC1-202ENST00000480952 SOX12O15370 315 aa19.36■□□□□ 0.69
NDC1-202ENST00000480952 ARHGEF25Q86VW2 580 aa19.36■□□□□ 0.69
NDC1-202ENST00000480952 KCNH5Q8NCM2 988 aa19.36■□□□□ 0.69
NDC1-202ENST00000480952 SBF2Q86WG5 1849 aa19.36■□□□□ 0.69
NDC1-202ENST00000480952 SLIT3O75094 1523 aa19.35■□□□□ 0.69
NDC1-202ENST00000480952 C1QTNF8P60827 252 aa19.35■□□□□ 0.69
NDC1-202ENST00000480952 MYOM1P52179 1685 aa19.35■□□□□ 0.69
NDC1-202ENST00000480952 ARXQ96QS3 562 aa19.34■□□□□ 0.69
NDC1-202ENST00000480952 SGIP1Q9BQI5 828 aa19.33■□□□□ 0.68
NDC1-202ENST00000480952 CPSF1Q10570 1443 aaKnown RBP19.33■□□□□ 0.68
NDC1-202ENST00000480952 ACSBG1Q96GR2 724 aa19.31■□□□□ 0.68
NDC1-202ENST00000480952 ZNF692Q9BU19 519 aaPredicted RBP19.31■□□□□ 0.68
NDC1-202ENST00000480952 TTC21BQ7Z4L5 1316 aa19.3■□□□□ 0.68
NDC1-202ENST00000480952 EVC2Q86UK5 1308 aa19.3■□□□□ 0.68
NDC1-202ENST00000480952 GPR162Q16538 588 aa19.3■□□□□ 0.68
NDC1-202ENST00000480952 KIAA1210Q9ULL0 1709 aa19.3■□□□□ 0.68
NDC1-202ENST00000480952 CCDC7Q96M83 1385 aa19.3■□□□□ 0.68
NDC1-202ENST00000480952 COL18A1P39060 1754 aa19.29■□□□□ 0.68
NDC1-202ENST00000480952 PIK3C2AO00443 1686 aa19.26■□□□□ 0.67
NDC1-202ENST00000480952 AKAP12Q02952 1782 aa19.26■□□□□ 0.67
NDC1-202ENST00000480952 TTC21AQ8NDW8 1320 aa19.25■□□□□ 0.67
NDC1-202ENST00000480952 KLHL34Q8N239 644 aa19.25■□□□□ 0.67
NDC1-202ENST00000480952 NLRP2Q9NX02 1062 aa19.25■□□□□ 0.67
NDC1-202ENST00000480952 TNS2Q63HR2 1409 aa19.25■□□□□ 0.67
NDC1-202ENST00000480952 MAP3K5Q99683 1374 aa19.24■□□□□ 0.67
NDC1-202ENST00000480952 WNK3Q9BYP7 1800 aa19.23■□□□□ 0.67
NDC1-202ENST00000480952 ZNF827Q17R98 1081 aa19.23■□□□□ 0.67
NDC1-202ENST00000480952 QRICH2Q9H0J4 1663 aa19.22■□□□□ 0.67
NDC1-202ENST00000480952 GIGYF1O75420 1035 aaPredicted RBP19.22■□□□□ 0.67
NDC1-202ENST00000480952 IL2RBP14784 551 aa19.22■□□□□ 0.67
NDC1-202ENST00000480952 POLD1P28340 1107 aa19.22■□□□□ 0.67
NDC1-202ENST00000480952 PELP1Q8IZL8 1130 aaKnown RBP19.22■□□□□ 0.67
NDC1-202ENST00000480952 LRRC4BQ9NT99 713 aa19.21■□□□□ 0.67
NDC1-202ENST00000480952 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
NDC1-202ENST00000480952 SLC16A10Q8TF71 515 aa19.2■□□□□ 0.66
NDC1-202ENST00000480952 CHD4Q14839 1912 aa19.19■□□□□ 0.66
NDC1-202ENST00000480952 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.19■□□□□ 0.66
NDC1-202ENST00000480952 ERBB3P21860 1342 aa19.19■□□□□ 0.66
NDC1-202ENST00000480952 RGPD5Q99666 1765 aa19.19■□□□□ 0.66
NDC1-202ENST00000480952 TRPM1Q7Z4N2 1603 aa19.18■□□□□ 0.66
NDC1-202ENST00000480952 IFFO2Q5TF58 517 aa19.18■□□□□ 0.66
NDC1-202ENST00000480952 AKT1S1Q96B36 256 aa19.18■□□□□ 0.66
NDC1-202ENST00000480952 NHSQ6T4R5 1651 aa19.17■□□□□ 0.66
NDC1-202ENST00000480952 NFAT5O94916 1531 aa19.17■□□□□ 0.66
NDC1-202ENST00000480952 SLC27A3Q5K4L6 730 aa19.17■□□□□ 0.66
NDC1-202ENST00000480952 ABCC6O95255 1503 aa19.16■□□□□ 0.66
NDC1-202ENST00000480952 ANKRD24Q8TF21 1146 aa19.16■□□□□ 0.66
NDC1-202ENST00000480952 L3MBTL2Q969R5 705 aa19.16■□□□□ 0.66
NDC1-202ENST00000480952 TFCP2L1Q9NZI6 479 aa19.16■□□□□ 0.66
NDC1-202ENST00000480952 DDX54Q8TDD1 881 aaKnown RBP19.15■□□□□ 0.66
NDC1-202ENST00000480952 PAPPAQ13219 1627 aa19.14■□□□□ 0.66
NDC1-202ENST00000480952 NME9Q86XW9 330 aa19.13■□□□□ 0.65
NDC1-202ENST00000480952 PNPLA7Q6ZV29 1317 aa19.13■□□□□ 0.65
NDC1-202ENST00000480952 USP31Q70CQ4 1352 aa19.13■□□□□ 0.65
NDC1-202ENST00000480952 NLGN2Q8NFZ4 835 aa19.12■□□□□ 0.65
NDC1-202ENST00000480952 SYTL4Q96C24 671 aaPredicted RBP19.12■□□□□ 0.65
NDC1-202ENST00000480952 ROCK2O75116 1388 aaKnown RBP19.11■□□□□ 0.65
NDC1-202ENST00000480952 GRIN3BO60391 1043 aa19.11■□□□□ 0.65
NDC1-202ENST00000480952 KCNQ4P56696 695 aa19.11■□□□□ 0.65
NDC1-202ENST00000480952 GOLGB1Q14789 3259 aaKnown RBP19.11■□□□□ 0.65
NDC1-202ENST00000480952 TMC1Q8TDI8 760 aa19.1■□□□□ 0.65
NDC1-202ENST00000480952 BTAF1O14981 1849 aa19.09■□□□□ 0.65
NDC1-202ENST00000480952 MSH5O43196 834 aa19.09■□□□□ 0.65
NDC1-202ENST00000480952 PRIM1P49642 420 aaKnown RBP19.08■□□□□ 0.64
NDC1-202ENST00000480952 HDGFL2Q7Z4V5 671 aaPredicted RBP19.08■□□□□ 0.64
NDC1-202ENST00000480952 LTV1Q96GA3 475 aaPredicted RBP19.08■□□□□ 0.64
NDC1-202ENST00000480952 YBX3P16989 372 aaKnown RBP eCLIP19.07■□□□□ 0.643e-6■■□□□ 12.4
NDC1-202ENST00000480952 KAT6BQ8WYB5 2073 aa19.07■□□□□ 0.64
NDC1-202ENST00000480952 CEP350Q5VT06 3117 aa19.07■□□□□ 0.64
NDC1-202ENST00000480952 SBNO2Q9Y2G9 1366 aa19.06■□□□□ 0.64
NDC1-202ENST00000480952 IP6K1Q92551 441 aa19.05■□□□□ 0.64
NDC1-202ENST00000480952 CCNL1Q9UK58 526 aaPredicted RBP19.05■□□□□ 0.64
NDC1-202ENST00000480952 SLC12A5Q9H2X9 1139 aa19.04■□□□□ 0.64
NDC1-202ENST00000480952 ANKRD36BQ8N2N9 1353 aa19.04■□□□□ 0.64
NDC1-202ENST00000480952 SIN3AQ96ST3 1273 aa19.03■□□□□ 0.64
NDC1-202ENST00000480952 NEUROD1Q13562 356 aa19.02■□□□□ 0.64
NDC1-202ENST00000480952 COL23A1Q86Y22 540 aaPredicted RBP19.02■□□□□ 0.64
NDC1-202ENST00000480952 TERF2IPQ9NYB0 399 aa19.02■□□□□ 0.64
NDC1-202ENST00000480952 SHANK3Q9BYB0 1731 aa19.01■□□□□ 0.63
NDC1-202ENST00000480952 ZCRB1Q8TBF4 217 aaKnown RBP19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms