RNA–Protein interactions for RNA: ENST00000480923.5

VPS36-204, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 614 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-204ENST00000480923 TCP11L2Q8N4U5 519 aa28.01■■■□□ 2.07
VPS36-204ENST00000480923 BRWD3Q6RI45 1802 aa28.01■■■□□ 2.07
VPS36-204ENST00000480923 COG3Q96JB2 828 aa28■■■□□ 2.07
VPS36-204ENST00000480923 BARGINQ6ZT62 677 aa27.99■■■□□ 2.07
VPS36-204ENST00000480923 CRB1P82279 1406 aa27.99■■■□□ 2.07
VPS36-204ENST00000480923 CSB-PGBD3P0DP91 1061 aa27.98■■■□□ 2.07
VPS36-204ENST00000480923 TOM1L2Q6ZVM7 507 aa27.98■■■□□ 2.07
VPS36-204ENST00000480923 COL18A1P39060 1754 aa27.98■■■□□ 2.07
VPS36-204ENST00000480923 THSD7AQ9UPZ6 1657 aa27.97■■■□□ 2.07
VPS36-204ENST00000480923 THRAP3Q9Y2W1 955 aaKnown RBP27.97■■■□□ 2.07
VPS36-204ENST00000480923 WDR17Q8IZU2 1322 aa27.96■■■□□ 2.07
VPS36-204ENST00000480923 CCDC125Q86Z20 511 aa27.96■■■□□ 2.07
VPS36-204ENST00000480923 GGNBP2Q9H3C7 697 aa27.94■■■□□ 2.06
VPS36-204ENST00000480923 ABCC6O95255 1503 aa27.93■■■□□ 2.06
VPS36-204ENST00000480923 FYB1O15117 783 aa27.93■■■□□ 2.06
VPS36-204ENST00000480923 MYOM1P52179 1685 aa27.93■■■□□ 2.06
VPS36-204ENST00000480923 FAM182BQ5T319 152 aa27.92■■■□□ 2.06
VPS36-204ENST00000480923 BLMP54132 1417 aaPredicted RBP27.92■■■□□ 2.06
VPS36-204ENST00000480923 CARD14Q9BXL6 1004 aa27.91■■■□□ 2.06
VPS36-204ENST00000480923 SF3B2Q13435 895 aaKnown RBP27.9■■■□□ 2.06
VPS36-204ENST00000480923 NSD3Q9BZ95 1437 aa27.9■■■□□ 2.06
VPS36-204ENST00000480923 EP400Q96L91 3159 aa27.89■■■□□ 2.06
VPS36-204ENST00000480923 PDE3BQ13370 1112 aa27.89■■■□□ 2.06
VPS36-204ENST00000480923 CARD10Q9BWT7 1032 aa27.87■■■□□ 2.05
VPS36-204ENST00000480923 FBLN1P23142 703 aa27.86■■■□□ 2.05
VPS36-204ENST00000480923 ERBB3P21860 1342 aa27.86■■■□□ 2.05
VPS36-204ENST00000480923 LTN1O94822 1766 aa27.86■■■□□ 2.05
VPS36-204ENST00000480923 RGPD5Q99666 1765 aa27.86■■■□□ 2.05
VPS36-204ENST00000480923 ANKRD24Q8TF21 1146 aa27.85■■■□□ 2.05
VPS36-204ENST00000480923 IP6K1Q92551 441 aa27.85■■■□□ 2.05
VPS36-204ENST00000480923 MAP3K19Q56UN5 1328 aa27.85■■■□□ 2.05
VPS36-204ENST00000480923 AMPHP49418 695 aa27.84■■■□□ 2.05
VPS36-204ENST00000480923 NLRP2Q9NX02 1062 aa27.84■■■□□ 2.05
VPS36-204ENST00000480923 FAM196AQ6ZSG2 479 aa27.83■■■□□ 2.05
VPS36-204ENST00000480923 CCDC7Q96M83 1385 aa27.83■■■□□ 2.05
VPS36-204ENST00000480923 C11orf95C9JLR9 678 aaPredicted RBP27.82■■■□□ 2.04
VPS36-204ENST00000480923 CDCA7Q9BWT1 371 aaPredicted RBP27.82■■■□□ 2.04
VPS36-204ENST00000480923 RRS1Q15050 365 aaKnown RBP27.81■■■□□ 2.04
VPS36-204ENST00000480923 DDB1Q16531 1140 aa27.81■■■□□ 2.04
VPS36-204ENST00000480923 LTV1Q96GA3 475 aaPredicted RBP27.81■■■□□ 2.04
VPS36-204ENST00000480923 CGNL1Q0VF96 1302 aa27.81■■■□□ 2.04
VPS36-204ENST00000480923 HOXC9P31274 260 aa27.8■■■□□ 2.04
VPS36-204ENST00000480923 DEFB132Q7Z7B7 95 aa27.8■■■□□ 2.04
VPS36-204ENST00000480923 KIF20BQ96Q89 1820 aa27.8■■■□□ 2.04
VPS36-204ENST00000480923 PARP4Q9UKK3 1724 aaKnown RBP27.79■■■□□ 2.04
VPS36-204ENST00000480923 PANK3Q9H999 370 aa27.78■■■□□ 2.04
VPS36-204ENST00000480923 BAG6P46379 1132 aa27.76■■■□□ 2.03
VPS36-204ENST00000480923 DISP2A7MBM2 1401 aa27.75■■■□□ 2.03
VPS36-204ENST00000480923 RTL1A6NKG5 1358 aa27.75■■■□□ 2.03
VPS36-204ENST00000480923 TRIM37O94972 964 aa27.75■■■□□ 2.03
VPS36-204ENST00000480923 LRRC37A3O60309 1634 aa27.74■■■□□ 2.03
VPS36-204ENST00000480923 EXOC5O00471 708 aa27.73■■■□□ 2.03
VPS36-204ENST00000480923 KIF7Q2M1P5 1343 aa27.72■■■□□ 2.03
VPS36-204ENST00000480923 WNK3Q9BYP7 1800 aa27.72■■■□□ 2.03
VPS36-204ENST00000480923 OVOS2A0A0G2JMS6 1433 aa27.71■■■□□ 2.03
VPS36-204ENST00000480923 RGPD1P0DJD0 1748 aa27.71■■■□□ 2.03
VPS36-204ENST00000480923 IL2RBP14784 551 aa27.71■■■□□ 2.03
VPS36-204ENST00000480923 EN1Q05925 392 aaPredicted RBP27.68■■■□□ 2.02
VPS36-204ENST00000480923 MARCH10Q8NA82 808 aaPredicted RBP27.68■■■□□ 2.02
VPS36-204ENST00000480923 EMILIN1Q9Y6C2 1016 aa27.68■■■□□ 2.02
VPS36-204ENST00000480923 FLT4P35916 1363 aa27.68■■■□□ 2.02
VPS36-204ENST00000480923 TNS2Q63HR2 1409 aa27.67■■■□□ 2.02
VPS36-204ENST00000480923 SMG6Q86US8 1419 aaKnown RBP27.67■■■□□ 2.02
VPS36-204ENST00000480923 KIF24Q5T7B8 1368 aa27.66■■■□□ 2.02
VPS36-204ENST00000480923 PPM1GO15355 546 aaPredicted RBP27.66■■■□□ 2.02
VPS36-204ENST00000480923 APBA3O96018 575 aa27.66■■■□□ 2.02
VPS36-204ENST00000480923 HSP90AB2PQ58FF8 381 aa27.66■■■□□ 2.02
VPS36-204ENST00000480923 INSRP06213 1382 aa27.65■■■□□ 2.02
VPS36-204ENST00000480923 TNNT2P45379 298 aaPredicted RBP27.65■■■□□ 2.02
VPS36-204ENST00000480923 FAM208AQ9UK61 1670 aaKnown RBP27.65■■■□□ 2.02
VPS36-204ENST00000480923 KNSTRNQ9Y448 316 aa27.64■■■□□ 2.02
VPS36-204ENST00000480923 TNS1Q9HBL0 1735 aaKnown RBP27.64■■■□□ 2.01
VPS36-204ENST00000480923 NSD2O96028 1365 aa27.62■■■□□ 2.01
VPS36-204ENST00000480923 PEAK1Q9H792 1746 aa27.62■■■□□ 2.01
VPS36-204ENST00000480923 NBPF6Q5VWK0 638 aa27.61■■■□□ 2.01
VPS36-204ENST00000480923 NBPF4Q96M43 638 aa27.61■■■□□ 2.01
VPS36-204ENST00000480923 EZH2Q15910 746 aaKnown RBP27.6■■■□□ 2.01
VPS36-204ENST00000480923 USHBP1Q8N6Y0 703 aa27.6■■■□□ 2.01
VPS36-204ENST00000480923 POLKQ9UBT6 870 aa27.59■■■□□ 2.01
VPS36-204ENST00000480923 MORC1Q86VD1 984 aa27.58■■■□□ 2.01
VPS36-204ENST00000480923 CAMKK2Q96RR4 588 aa27.58■■■□□ 2.01
VPS36-204ENST00000480923 BCL9O00512 1426 aa27.58■■■□□ 2
VPS36-204ENST00000480923 ANKRD26Q9UPS8 1709 aa27.57■■■□□ 2
VPS36-204ENST00000480923 BCL11BQ9C0K0 894 aaPredicted RBP27.56■■■□□ 2
VPS36-204ENST00000480923 WASHC2AQ641Q2 1341 aa27.56■■■□□ 2
VPS36-204ENST00000480923 DDX54Q8TDD1 881 aaKnown RBP27.54■■■□□ 2
VPS36-204ENST00000480923 PARD3Q8TEW0 1356 aa27.54■■■□□ 2
VPS36-204ENST00000480923 RAPGEF4Q8WZA2 1011 aa27.54■■■□□ 2
VPS36-204ENST00000480923 RGPD2P0DJD1 1756 aa27.53■■■□□ 2
VPS36-204ENST00000480923 PTF1AQ7RTS3 328 aa27.53■■■□□ 2
VPS36-204ENST00000480923 MEGF6O75095 1541 aa27.52■■■□□ 2
VPS36-204ENST00000480923 AMER1Q5JTC6 1135 aaPredicted RBP27.52■■■□□ 2
VPS36-204ENST00000480923 ZCRB1Q8TBF4 217 aaKnown RBP27.51■■□□□ 1.99
VPS36-204ENST00000480923 ACSBG1Q96GR2 724 aa27.51■■□□□ 1.99
VPS36-204ENST00000480923 TATP17735 454 aaPredicted RBP27.5■■□□□ 1.99
VPS36-204ENST00000480923 MAP2P11137 1827 aaKnown RBP27.49■■□□□ 1.99
VPS36-204ENST00000480923 SBF2Q86WG5 1849 aa27.48■■□□□ 1.99
VPS36-204ENST00000480923 KCNQ2O43526 872 aa27.48■■□□□ 1.99
VPS36-204ENST00000480923 PER1O15534 1290 aaPredicted RBP27.47■■□□□ 1.99
VPS36-204ENST00000480923 PSDA5PKW4 1024 aaPredicted RBP27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms