RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 SLC26A8Q96RN1 970 aa11.26□□□□□ -0.61
VEGFA-212ENST00000480614 SERPINC1P01008 464 aa11.26□□□□□ -0.61
VEGFA-212ENST00000480614 JAKMIP3Q5VZ66 844 aa11.26□□□□□ -0.61
VEGFA-212ENST00000480614 CCDC91Q7Z6B0 441 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 CCDC57Q2TAC2 916 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 CCDC69A6NI79 296 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 FIBPO43427 364 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 CCDC112Q8NEF3 446 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 PPP1R12BO60237 982 aaPredicted RBP11.25□□□□□ -0.61
VEGFA-212ENST00000480614 NEK4P51957 841 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 OSCARQ8IYS5 282 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 HMOX1P09601 288 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 ME1P48163 572 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 CEP131Q9UPN4 1083 aa11.25□□□□□ -0.61
VEGFA-212ENST00000480614 PODXL2Q9NZ53 605 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 TRAK2O60296 914 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 CETN2P41208 172 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 CNNM1Q9NRU3 951 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 CIZ1Q9ULV3 898 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-212ENST00000480614 CASKIN1Q8WXD9 1431 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 NLRP6P59044 892 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 KLHL34Q8N239 644 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 SYNJ2O15056 1496 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 CEP57L1Q8IYX8 460 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 ABTB2Q8N961 1025 aa11.24□□□□□ -0.61
VEGFA-212ENST00000480614 ZSCAN31Q96LW9 406 aaPredicted RBP11.24□□□□□ -0.61
VEGFA-212ENST00000480614 FGD5Q6ZNL6 1462 aa11.23□□□□□ -0.61
VEGFA-212ENST00000480614 MCM3P25205 808 aa11.23□□□□□ -0.61
VEGFA-212ENST00000480614 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-212ENST00000480614 TNIP1Q15025 636 aa11.23□□□□□ -0.61
VEGFA-212ENST00000480614 ATAD2BQ9ULI0 1458 aa11.23□□□□□ -0.61
VEGFA-212ENST00000480614 PANK1Q8TE04 598 aa11.23□□□□□ -0.61
VEGFA-212ENST00000480614 ZNF287Q9HBT7 754 aa11.23□□□□□ -0.61
VEGFA-212ENST00000480614 IMMTQ16891 758 aaKnown RBP11.23□□□□□ -0.61
VEGFA-212ENST00000480614 TATP17735 454 aaPredicted RBP11.23□□□□□ -0.61
VEGFA-212ENST00000480614 MPHOSPH8Q99549 860 aa11.23□□□□□ -0.61
VEGFA-212ENST00000480614 NFKBIBQ15653 356 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 FEZ1Q99689 392 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 RNF214Q8ND24 703 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 UBAC1Q9BSL1 405 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 DAPK1P53355 1430 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 BRPF1P55201 1214 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-212ENST00000480614 SMTNL1A8MU46 457 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 MAP9Q49MG5 647 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 PHAXQ9H814 394 aaKnown RBP11.22□□□□□ -0.61
VEGFA-212ENST00000480614 LRRC9Q6ZRR7 1453 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 ATP2B1P20020 1258 aa11.22□□□□□ -0.61
VEGFA-212ENST00000480614 ZNF397Q8NF99 534 aaPredicted RBP11.22□□□□□ -0.61
VEGFA-212ENST00000480614 TAF4BQ92750 862 aa11.21□□□□□ -0.61
VEGFA-212ENST00000480614 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.61
VEGFA-212ENST00000480614 LRRCC1Q9C099 1032 aa11.21□□□□□ -0.61
VEGFA-212ENST00000480614 ZNF428Q96B54 188 aa11.21□□□□□ -0.62
VEGFA-212ENST00000480614 HDGFL1Q5TGJ6 251 aa11.21□□□□□ -0.62
VEGFA-212ENST00000480614 VPS36Q86VN1 386 aa11.21□□□□□ -0.62
VEGFA-212ENST00000480614 DNAJC2Q99543 621 aaKnown RBP11.21□□□□□ -0.62
VEGFA-212ENST00000480614 WDR63Q8IWG1 891 aa11.21□□□□□ -0.62
VEGFA-212ENST00000480614 ATP2B2Q01814 1243 aa11.21□□□□□ -0.62
VEGFA-212ENST00000480614 PPP6R1Q9UPN7 881 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 ANKRD62A6NC57 917 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 GBP3Q9H0R5 595 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 PDCL2Q8N4E4 241 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 MTMR7Q9Y216 660 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 CCDC148Q8NFR7 591 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 TANGO6Q9C0B7 1094 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 CENPHQ9H3R5 247 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 EPB41L2O43491 1005 aaKnown RBP11.2□□□□□ -0.62
VEGFA-212ENST00000480614 FMNL2Q96PY5 1086 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 PLEKHH1Q9ULM0 1364 aa11.2□□□□□ -0.62
VEGFA-212ENST00000480614 ZHX3Q9H4I2 956 aa11.19□□□□□ -0.62
VEGFA-212ENST00000480614 KIAA1328Q86T90 577 aa11.19□□□□□ -0.62
VEGFA-212ENST00000480614 TMOD2Q9NZR1 351 aa11.19□□□□□ -0.62
VEGFA-212ENST00000480614 HSP90AB3PQ58FF7 597 aa11.19□□□□□ -0.62
VEGFA-212ENST00000480614 SEC63Q9UGP8 760 aaKnown RBP11.19□□□□□ -0.62
VEGFA-212ENST00000480614 C9orf84Q5VXU9 1444 aa11.19□□□□□ -0.62
VEGFA-212ENST00000480614 NEBLO76041 1014 aa11.19□□□□□ -0.62
VEGFA-212ENST00000480614 SF3B2Q13435 895 aaKnown RBP11.19□□□□□ -0.62
VEGFA-212ENST00000480614 TWISTNBQ3B726 338 aaPredicted RBP11.19□□□□□ -0.62
VEGFA-212ENST00000480614 MPHOSPH10O00566 681 aaKnown RBP11.18□□□□□ -0.62
VEGFA-212ENST00000480614 BLOC1S2Q6QNY1 142 aa11.18□□□□□ -0.62
VEGFA-212ENST00000480614 NCOA2Q15596 1464 aa11.18□□□□□ -0.62
VEGFA-212ENST00000480614 CABP2Q9NPB3 220 aa11.18□□□□□ -0.62
VEGFA-212ENST00000480614 PRPF40AO75400 957 aaKnown RBP11.18□□□□□ -0.62
VEGFA-212ENST00000480614 TDO2P48775 406 aa11.18□□□□□ -0.62
VEGFA-212ENST00000480614 U3KPZ7 1027 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-212ENST00000480614 POGZQ7Z3K3 1410 aa11.18□□□□□ -0.62
VEGFA-212ENST00000480614 STAMBPO95630 424 aa11.18□□□□□ -0.62
VEGFA-212ENST00000480614 SEPT11Q9NVA2 429 aaKnown RBP11.18□□□□□ -0.62
VEGFA-212ENST00000480614 GOLGA6L10A0A0M3HER8 536 aa11.18□□□□□ -0.62
VEGFA-212ENST00000480614 K7ELQ4 463 aaPredicted RBP11.18□□□□□ -0.62
VEGFA-212ENST00000480614 PPP4R3AQ6IN85 833 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 LARP1BQ659C4 914 aaKnown RBP11.17□□□□□ -0.62
VEGFA-212ENST00000480614 CCDC150Q8NCX0 1101 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 SPATA32Q96LK8 384 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 WDHD1O75717 1129 aaPredicted RBP11.17□□□□□ -0.62
VEGFA-212ENST00000480614 MATR3P43243 847 aaKnown RBP eCLIP11.17□□□□□ -0.62
VEGFA-212ENST00000480614 DYDC1Q8WWB3 177 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 TAX1BP1Q86VP1 789 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 TCP11L2Q8N4U5 519 aa11.17□□□□□ -0.62
VEGFA-212ENST00000480614 FAM107BQ9H098 131 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms