RNA–Protein interactions for RNA: ENST00000479653.5

CCDC18-208, Transcript of coiled-coil domain containing 18, humanhuman

TSL 3

Gene CCDC18, Length 541 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC18-208ENST00000479653 COL5A2P05997 1499 aaPredicted RBP16.53■□□□□ 0.24
CCDC18-208ENST00000479653 MAP3K5Q99683 1374 aa16.52■□□□□ 0.24
CCDC18-208ENST00000479653 RGPD3A6NKT7 1758 aaPredicted RBP16.51■□□□□ 0.23
CCDC18-208ENST00000479653 RGPD4Q7Z3J3 1758 aa16.51■□□□□ 0.23
CCDC18-208ENST00000479653 PARP4Q9UKK3 1724 aaKnown RBP16.51■□□□□ 0.23
CCDC18-208ENST00000479653 KDM2AQ9Y2K7 1162 aa16.51■□□□□ 0.23
CCDC18-208ENST00000479653 PEAK1Q9H792 1746 aa16.5■□□□□ 0.23
CCDC18-208ENST00000479653 USP19O94966 1318 aa16.5■□□□□ 0.23
CCDC18-208ENST00000479653 CCDC61Q9Y6R9 512 aa16.5■□□□□ 0.23
CCDC18-208ENST00000479653 EXOC5O00471 708 aa16.49■□□□□ 0.23
CCDC18-208ENST00000479653 POLD1P28340 1107 aa16.49■□□□□ 0.23
CCDC18-208ENST00000479653 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
CCDC18-208ENST00000479653 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
CCDC18-208ENST00000479653 HSPA6P17066 643 aa16.48■□□□□ 0.23
CCDC18-208ENST00000479653 LMO7Q8WWI1 1683 aa16.48■□□□□ 0.23
CCDC18-208ENST00000479653 POLR3AO14802 1390 aaPredicted RBP16.48■□□□□ 0.23
CCDC18-208ENST00000479653 PLEKHG3A1L390 1219 aa16.47■□□□□ 0.23
CCDC18-208ENST00000479653 GRIN3BO60391 1043 aa16.47■□□□□ 0.23
CCDC18-208ENST00000479653 ACSBG1Q96GR2 724 aa16.47■□□□□ 0.23
CCDC18-208ENST00000479653 CSB-PGBD3P0DP91 1061 aa16.46■□□□□ 0.23
CCDC18-208ENST00000479653 NLRP6P59044 892 aa16.46■□□□□ 0.23
CCDC18-208ENST00000479653 NLGN2Q8NFZ4 835 aa16.46■□□□□ 0.23
CCDC18-208ENST00000479653 GPBP1L1Q9HC44 474 aaPredicted RBP16.46■□□□□ 0.23
CCDC18-208ENST00000479653 ADGRB1O14514 1584 aa16.46■□□□□ 0.23
CCDC18-208ENST00000479653 BCL9O00512 1426 aa16.45■□□□□ 0.22
CCDC18-208ENST00000479653 AXIN2Q9Y2T1 843 aa16.45■□□□□ 0.22
CCDC18-208ENST00000479653 AATKQ6ZMQ8 1374 aa16.45■□□□□ 0.22
CCDC18-208ENST00000479653 LRRC37A3O60309 1634 aa16.45■□□□□ 0.22
CCDC18-208ENST00000479653 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
CCDC18-208ENST00000479653 ZNF827Q17R98 1081 aa16.44■□□□□ 0.22
CCDC18-208ENST00000479653 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
CCDC18-208ENST00000479653 ZNF526Q8TF50 670 aaPredicted RBP16.44■□□□□ 0.22
CCDC18-208ENST00000479653 SBF2Q86WG5 1849 aa16.44■□□□□ 0.22
CCDC18-208ENST00000479653 YBX3P16989 372 aaKnown RBP eCLIP16.43■□□□□ 0.22
CCDC18-208ENST00000479653 SLC16A10Q8TF71 515 aa16.43■□□□□ 0.22
CCDC18-208ENST00000479653 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
CCDC18-208ENST00000479653 ATP10DQ9P241 1426 aa16.42■□□□□ 0.22
CCDC18-208ENST00000479653 CARD10Q9BWT7 1032 aa16.41■□□□□ 0.22
CCDC18-208ENST00000479653 LRRC4BQ9NT99 713 aa16.4■□□□□ 0.22
CCDC18-208ENST00000479653 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
CCDC18-208ENST00000479653 SOX12O15370 315 aa16.39■□□□□ 0.21
CCDC18-208ENST00000479653 SRPK2P78362 688 aaKnown RBP16.39■□□□□ 0.21
CCDC18-208ENST00000479653 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
CCDC18-208ENST00000479653 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
CCDC18-208ENST00000479653 CAPN15O75808 1086 aa16.36■□□□□ 0.21
CCDC18-208ENST00000479653 BRD4O60885 1362 aaPredicted RBP16.36■□□□□ 0.21
CCDC18-208ENST00000479653 CABP2Q9NPB3 220 aa16.35■□□□□ 0.21
CCDC18-208ENST00000479653 PNPLA7Q6ZV29 1317 aa16.35■□□□□ 0.21
CCDC18-208ENST00000479653 USP6P35125 1406 aa16.35■□□□□ 0.21
CCDC18-208ENST00000479653 PPIP5K1Q6PFW1 1433 aa16.35■□□□□ 0.21
CCDC18-208ENST00000479653 ARHGEF25Q86VW2 580 aa16.34■□□□□ 0.21
CCDC18-208ENST00000479653 CABP1Q9NZU7 370 aa16.33■□□□□ 0.2
CCDC18-208ENST00000479653 KCNQ4P56696 695 aa16.32■□□□□ 0.2
CCDC18-208ENST00000479653 AKAP12Q02952 1782 aa16.32■□□□□ 0.2
CCDC18-208ENST00000479653 SLC27A3Q5K4L6 730 aa16.32■□□□□ 0.2
CCDC18-208ENST00000479653 KCNH5Q8NCM2 988 aa16.32■□□□□ 0.2
CCDC18-208ENST00000479653 CPSF1Q10570 1443 aaKnown RBP16.31■□□□□ 0.2
CCDC18-208ENST00000479653 CCDC7Q96M83 1385 aa16.31■□□□□ 0.2
CCDC18-208ENST00000479653 APLP1P51693 650 aa16.31■□□□□ 0.2
CCDC18-208ENST00000479653 STAC3Q96MF2 364 aa16.31■□□□□ 0.2
CCDC18-208ENST00000479653 TNS2Q63HR2 1409 aa16.3■□□□□ 0.2
CCDC18-208ENST00000479653 NLRP2Q9NX02 1062 aa16.3■□□□□ 0.2
CCDC18-208ENST00000479653 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
CCDC18-208ENST00000479653 SLIT3O75094 1523 aa16.29■□□□□ 0.2
CCDC18-208ENST00000479653 TOPAZ1Q8N9V7 1692 aa16.28■□□□□ 0.2
CCDC18-208ENST00000479653 IL2RBP14784 551 aa16.28■□□□□ 0.2
CCDC18-208ENST00000479653 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
CCDC18-208ENST00000479653 COL13A1Q5TAT6 717 aaPredicted RBP16.27■□□□□ 0.2
CCDC18-208ENST00000479653 DNAJC5GQ8N7S2 189 aa16.27■□□□□ 0.2
CCDC18-208ENST00000479653 SYTL4Q96C24 671 aaPredicted RBP16.27■□□□□ 0.2
CCDC18-208ENST00000479653 ARHGEF28Q8N1W1 1705 aaKnown RBP16.26■□□□□ 0.19
CCDC18-208ENST00000479653 KIF3CO14782 793 aa16.26■□□□□ 0.19
CCDC18-208ENST00000479653 DDX54Q8TDD1 881 aaKnown RBP16.26■□□□□ 0.19
CCDC18-208ENST00000479653 WWC3Q9ULE0 1092 aa16.26■□□□□ 0.19
CCDC18-208ENST00000479653 NHSQ6T4R5 1651 aa16.26■□□□□ 0.19
CCDC18-208ENST00000479653 ADCY9O60503 1353 aa16.26■□□□□ 0.19
CCDC18-208ENST00000479653 COL23A1Q86Y22 540 aaPredicted RBP16.25■□□□□ 0.19
CCDC18-208ENST00000479653 COL18A1P39060 1754 aa16.25■□□□□ 0.19
CCDC18-208ENST00000479653 CD2APQ9Y5K6 639 aa16.24■□□□□ 0.19
CCDC18-208ENST00000479653 WNK3Q9BYP7 1800 aa16.24■□□□□ 0.19
CCDC18-208ENST00000479653 TTC21BQ7Z4L5 1316 aa16.22■□□□□ 0.19
CCDC18-208ENST00000479653 TNS4Q8IZW8 715 aa16.22■□□□□ 0.19
CCDC18-208ENST00000479653 CENPJQ9HC77 1338 aaPredicted RBP16.21■□□□□ 0.19
CCDC18-208ENST00000479653 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.19
CCDC18-208ENST00000479653 NBPF1Q3BBV0 1214 aa16.21■□□□□ 0.19
CCDC18-208ENST00000479653 CCNL1Q9UK58 526 aaPredicted RBP16.21■□□□□ 0.19
CCDC18-208ENST00000479653 ABCC6O95255 1503 aa16.2■□□□□ 0.18
CCDC18-208ENST00000479653 BTAF1O14981 1849 aa16.2■□□□□ 0.18
CCDC18-208ENST00000479653 TOMM70O94826 608 aa16.2■□□□□ 0.18
CCDC18-208ENST00000479653 ZNF692Q9BU19 519 aaPredicted RBP16.2■□□□□ 0.18
CCDC18-208ENST00000479653 ERBB3P21860 1342 aa16.19■□□□□ 0.18
CCDC18-208ENST00000479653 PRELPP51888 382 aa16.19■□□□□ 0.18
CCDC18-208ENST00000479653 TRPM1Q7Z4N2 1603 aa16.19■□□□□ 0.18
CCDC18-208ENST00000479653 ANKRD24Q8TF21 1146 aa16.18■□□□□ 0.18
CCDC18-208ENST00000479653 KAT6BQ8WYB5 2073 aa16.17■□□□□ 0.18
CCDC18-208ENST00000479653 PIK3C2AO00443 1686 aa16.17■□□□□ 0.18
CCDC18-208ENST00000479653 IGSF1Q8N6C5 1336 aa16.17■□□□□ 0.18
CCDC18-208ENST00000479653 HTRA3P83110 453 aa16.16■□□□□ 0.18
CCDC18-208ENST00000479653 TTC21AQ8NDW8 1320 aa16.16■□□□□ 0.18
CCDC18-208ENST00000479653 RGPD5Q99666 1765 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms