RNA–Protein interactions for RNA: ENST00000479615.5

PRKN-207, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene PRKN, Length 904 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-207ENST00000479615 PCGF6Q9BYE7 350 aa21.12■□□□□ 0.97
PRKN-207ENST00000479615 CD163L1Q9NR16 1453 aa21.12■□□□□ 0.97
PRKN-207ENST00000479615 WDR17Q8IZU2 1322 aa21.11■□□□□ 0.97
PRKN-207ENST00000479615 USP47Q96K76 1375 aa21.1■□□□□ 0.97
PRKN-207ENST00000479615 ABCC6O95255 1503 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 AXIN2Q9Y2T1 843 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 MON2Q7Z3U7 1717 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 A0A1W2PP64 1363 aa21.09■□□□□ 0.97
PRKN-207ENST00000479615 CARD10Q9BWT7 1032 aa21.08■□□□□ 0.97
PRKN-207ENST00000479615 DISP2A7MBM2 1401 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 SOX12O15370 315 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 CSB-PGBD3P0DP91 1061 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 FAM182BQ5T319 152 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 NME9Q86XW9 330 aa21.07■□□□□ 0.96
PRKN-207ENST00000479615 NFAT5O94916 1531 aa21.05■□□□□ 0.96
PRKN-207ENST00000479615 DDB1Q16531 1140 aa21.05■□□□□ 0.96
PRKN-207ENST00000479615 ANKRD36BQ8N2N9 1353 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 PARD3Q8TEW0 1356 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 CCDC7Q96M83 1385 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 COL18A1P39060 1754 aa21.04■□□□□ 0.96
PRKN-207ENST00000479615 TRIM37O94972 964 aa21.03■□□□□ 0.96
PRKN-207ENST00000479615 RGPD1P0DJD0 1748 aa21.03■□□□□ 0.96
PRKN-207ENST00000479615 USP54Q70EL1 1684 aa21.02■□□□□ 0.96
PRKN-207ENST00000479615 EN1Q05925 392 aaPredicted RBP21.02■□□□□ 0.96
PRKN-207ENST00000479615 COG3Q96JB2 828 aa21.02■□□□□ 0.96
PRKN-207ENST00000479615 APBA3O96018 575 aa21■□□□□ 0.95
PRKN-207ENST00000479615 OVOS2A0A0G2JMS6 1433 aa21■□□□□ 0.95
PRKN-207ENST00000479615 OVOS2A0A0J9YW53 1432 aa21■□□□□ 0.95
PRKN-207ENST00000479615 OVOS2Q6IE36 1432 aa21■□□□□ 0.95
PRKN-207ENST00000479615 PARP4Q9UKK3 1724 aaKnown RBP21■□□□□ 0.95
PRKN-207ENST00000479615 CCER1Q8TC90 406 aaPredicted RBP20.99■□□□□ 0.95
PRKN-207ENST00000479615 ERBB3P21860 1342 aa20.99■□□□□ 0.95
PRKN-207ENST00000479615 EXOC5O00471 708 aa20.98■□□□□ 0.95
PRKN-207ENST00000479615 CAMKK2Q96RR4 588 aa20.98■□□□□ 0.95
PRKN-207ENST00000479615 IP6K1Q92551 441 aa20.97■□□□□ 0.95
PRKN-207ENST00000479615 BCL9O00512 1426 aa20.96■□□□□ 0.95
PRKN-207ENST00000479615 EZH2Q15910 746 aaKnown RBP20.95■□□□□ 0.94
PRKN-207ENST00000479615 ANKRD24Q8TF21 1146 aa20.95■□□□□ 0.94
PRKN-207ENST00000479615 NLRP2Q9NX02 1062 aa20.95■□□□□ 0.94
PRKN-207ENST00000479615 BCL11BQ9C0K0 894 aaPredicted RBP20.93■□□□□ 0.94
PRKN-207ENST00000479615 FYB1O15117 783 aa20.92■□□□□ 0.94
PRKN-207ENST00000479615 PLSCR1O15162 318 aa20.92■□□□□ 0.94
PRKN-207ENST00000479615 IL2RBP14784 551 aa20.92■□□□□ 0.94
PRKN-207ENST00000479615 TNS1Q9HBL0 1735 aaKnown RBP20.92■□□□□ 0.94
PRKN-207ENST00000479615 AMPHP49418 695 aa20.91■□□□□ 0.94
PRKN-207ENST00000479615 NBPF14Q5TI25 921 aa20.91■□□□□ 0.94
PRKN-207ENST00000479615 MARCH10Q8NA82 808 aaPredicted RBP20.91■□□□□ 0.94
PRKN-207ENST00000479615 EIF4G2P78344 907 aaKnown RBP eCLIP20.9■□□□□ 0.946e-6■■■■□ 25.1
PRKN-207ENST00000479615 LRRC37A3O60309 1634 aa20.89■□□□□ 0.94
PRKN-207ENST00000479615 MAP3K19Q56UN5 1328 aa20.89■□□□□ 0.93
PRKN-207ENST00000479615 RTL1A6NKG5 1358 aa20.88■□□□□ 0.93
PRKN-207ENST00000479615 HOXC9P31274 260 aa20.88■□□□□ 0.93
PRKN-207ENST00000479615 TNS2Q63HR2 1409 aa20.87■□□□□ 0.93
PRKN-207ENST00000479615 RGPD5Q99666 1765 aa20.87■□□□□ 0.93
PRKN-207ENST00000479615 GGNBP2Q9H3C7 697 aa20.87■□□□□ 0.93
PRKN-207ENST00000479615 KIF24Q5T7B8 1368 aa20.86■□□□□ 0.93
PRKN-207ENST00000479615 PSDA5PKW4 1024 aaPredicted RBP20.86■□□□□ 0.93
PRKN-207ENST00000479615 LTN1O94822 1766 aa20.86■□□□□ 0.93
PRKN-207ENST00000479615 PEAK1Q9H792 1746 aa20.86■□□□□ 0.93
PRKN-207ENST00000479615 R3HDM1Q15032 1099 aaKnown RBP20.85■□□□□ 0.93
PRKN-207ENST00000479615 WNK3Q9BYP7 1800 aa20.84■□□□□ 0.93
PRKN-207ENST00000479615 CARD14Q9BXL6 1004 aa20.83■□□□□ 0.93
PRKN-207ENST00000479615 CGNL1Q0VF96 1302 aa20.82■□□□□ 0.92
PRKN-207ENST00000479615 SRCAPQ6ZRS2 3230 aa20.82■□□□□ 0.92
PRKN-207ENST00000479615 LTV1Q96GA3 475 aaPredicted RBP20.82■□□□□ 0.92
PRKN-207ENST00000479615 SMG6Q86US8 1419 aaKnown RBP20.81■□□□□ 0.92
PRKN-207ENST00000479615 FAM208AQ9UK61 1670 aaKnown RBP20.8■□□□□ 0.92
PRKN-207ENST00000479615 NSD3Q9BZ95 1437 aa20.8■□□□□ 0.92
PRKN-207ENST00000479615 RRS1Q15050 365 aaKnown RBP20.8■□□□□ 0.92
PRKN-207ENST00000479615 HSPA5P11021 654 aaKnown RBP20.79■□□□□ 0.92
PRKN-207ENST00000479615 FLT4P35916 1363 aa20.79■□□□□ 0.92
PRKN-207ENST00000479615 RGPD3A6NKT7 1758 aaPredicted RBP20.78■□□□□ 0.92
PRKN-207ENST00000479615 RGPD4Q7Z3J3 1758 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 INSRP06213 1382 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 FBLN1P23142 703 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 LRP5O75197 1615 aa20.78■□□□□ 0.92
PRKN-207ENST00000479615 RREB1Q92766 1687 aa20.77■□□□□ 0.91
PRKN-207ENST00000479615 SBF2Q86WG5 1849 aa20.76■□□□□ 0.91
PRKN-207ENST00000479615 ZCRB1Q8TBF4 217 aaKnown RBP20.75■□□□□ 0.91
PRKN-207ENST00000479615 POLR3GLQ9BT43 218 aa20.75■□□□□ 0.91
PRKN-207ENST00000479615 PTF1AQ7RTS3 328 aa20.74■□□□□ 0.91
PRKN-207ENST00000479615 DDX54Q8TDD1 881 aaKnown RBP20.74■□□□□ 0.91
PRKN-207ENST00000479615 RAPGEF4Q8WZA2 1011 aa20.74■□□□□ 0.91
PRKN-207ENST00000479615 MYOM1P52179 1685 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 KCNQ2O43526 872 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 TXNRD1Q16881 649 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 HSP90AB2PQ58FF8 381 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 NBPF6Q5VWK0 638 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 PROM2Q8N271 834 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 NBPF4Q96M43 638 aa20.73■□□□□ 0.91
PRKN-207ENST00000479615 ACSBG1Q96GR2 724 aa20.72■□□□□ 0.91
PRKN-207ENST00000479615 NUP188Q5SRE5 1749 aa20.72■□□□□ 0.91
PRKN-207ENST00000479615 KIF20BQ96Q89 1820 aa20.71■□□□□ 0.91
PRKN-207ENST00000479615 TATP17735 454 aaPredicted RBP20.71■□□□□ 0.91
PRKN-207ENST00000479615 WASHC2AQ641Q2 1341 aa20.71■□□□□ 0.91
PRKN-207ENST00000479615 STK32BQ9NY57 414 aa20.7■□□□□ 0.9
PRKN-207ENST00000479615 NSD2O96028 1365 aa20.7■□□□□ 0.9
PRKN-207ENST00000479615 HMGB2P26583 209 aaKnown RBP20.69■□□□□ 0.9
PRKN-207ENST00000479615 PANK3Q9H999 370 aa20.69■□□□□ 0.9
PRKN-207ENST00000479615 SPON1Q9HCB6 807 aa20.69■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms