RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 EIF3AQ14152 1382 aaKnown RBP11.1□□□□□ -0.63
HMGCL-205ENST00000479458 ATP7BP35670 1465 aa11.1□□□□□ -0.63
HMGCL-205ENST00000479458 COL24A1Q17RW2 1714 aa11.09□□□□□ -0.63
HMGCL-205ENST00000479458 LMO7Q8WWI1 1683 aa11.09□□□□□ -0.63
HMGCL-205ENST00000479458 PMFBP1Q8TBY8 1022 aa11.09□□□□□ -0.63
HMGCL-205ENST00000479458 L3MBTL2Q969R5 705 aa11.09□□□□□ -0.63
HMGCL-205ENST00000479458 PCGF6Q9BYE7 350 aa11.09□□□□□ -0.63
HMGCL-205ENST00000479458 KIAA1210Q9ULL0 1709 aa11.09□□□□□ -0.63
HMGCL-205ENST00000479458 CPDO75976 1380 aa11.08□□□□□ -0.64
HMGCL-205ENST00000479458 NEUROD1Q13562 356 aa11.08□□□□□ -0.64
HMGCL-205ENST00000479458 POLA2Q14181 598 aa11.08□□□□□ -0.64
HMGCL-205ENST00000479458 GPR162Q16538 588 aa11.08□□□□□ -0.64
HMGCL-205ENST00000479458 STRN4Q9NRL3 753 aa11.08□□□□□ -0.64
HMGCL-205ENST00000479458 STK32BQ9NY57 414 aa11.08□□□□□ -0.64
HMGCL-205ENST00000479458 EVA1CP58658 441 aa11.07□□□□□ -0.64
HMGCL-205ENST00000479458 TULP4Q9NRJ4 1543 aa11.06□□□□□ -0.64
HMGCL-205ENST00000479458 ABCB7O75027 752 aa11.06□□□□□ -0.64
HMGCL-205ENST00000479458 CHRNA2Q15822 529 aa11.06□□□□□ -0.64
HMGCL-205ENST00000479458 LARP1Q6PKG0 1096 aaKnown RBP11.06□□□□□ -0.64
HMGCL-205ENST00000479458 PRAM1Q96QH2 718 aa11.06□□□□□ -0.64
HMGCL-205ENST00000479458 USP35Q9P2H5 1018 aa11.06□□□□□ -0.64
HMGCL-205ENST00000479458 TXNRD1Q16881 649 aa11.05□□□□□ -0.64
HMGCL-205ENST00000479458 TRAK1Q9UPV9 953 aa11.05□□□□□ -0.64
HMGCL-205ENST00000479458 LRRC37A3O60309 1634 aa11.05□□□□□ -0.64
HMGCL-205ENST00000479458 ARHGEF28Q8N1W1 1705 aaKnown RBP11.04□□□□□ -0.64
HMGCL-205ENST00000479458 GRIN3BO60391 1043 aa11.04□□□□□ -0.64
HMGCL-205ENST00000479458 QSER1Q2KHR3 1735 aa11.04□□□□□ -0.64
HMGCL-205ENST00000479458 CRB1P82279 1406 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 PAPPAQ13219 1627 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 TRPM1Q7Z4N2 1603 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 SAFB2Q14151 953 aaKnown RBP eCLIP11.03□□□□□ -0.64
HMGCL-205ENST00000479458 NBPF1Q3BBV0 1214 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 SLC16A10Q8TF71 515 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 POGKQ9P215 609 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 ITSN1Q15811 1721 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 PRR36Q9H6K5 1346 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 AKAP12Q02952 1782 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 TONSLQ96HA7 1378 aa11.03□□□□□ -0.64
HMGCL-205ENST00000479458 COL5A2P05997 1499 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-205ENST00000479458 ZC3H6P61129 1189 aaKnown RBP11.02□□□□□ -0.65
HMGCL-205ENST00000479458 CDCA7Q9BWT1 371 aaPredicted RBP11.02□□□□□ -0.65
HMGCL-205ENST00000479458 ATP10DQ9P241 1426 aa11.01□□□□□ -0.65
HMGCL-205ENST00000479458 WNK3Q9BYP7 1800 aa11.01□□□□□ -0.65
HMGCL-205ENST00000479458 PAK3O75914 559 aaPredicted RBP11.01□□□□□ -0.65
HMGCL-205ENST00000479458 DDB1Q16531 1140 aa11.01□□□□□ -0.65
HMGCL-205ENST00000479458 NGDNQ8NEJ9 315 aaKnown RBP11.01□□□□□ -0.65
HMGCL-205ENST00000479458 ADCY9O60503 1353 aa11.01□□□□□ -0.65
HMGCL-205ENST00000479458 SLC34A2O95436 690 aa11□□□□□ -0.65
HMGCL-205ENST00000479458 PTF1AQ7RTS3 328 aa11□□□□□ -0.65
HMGCL-205ENST00000479458 GPBP1L1Q9HC44 474 aaPredicted RBP11□□□□□ -0.65
HMGCL-205ENST00000479458 USP19O94966 1318 aa11□□□□□ -0.65
HMGCL-205ENST00000479458 WASLO00401 505 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-205ENST00000479458 APLP1P51693 650 aa10.99□□□□□ -0.65
HMGCL-205ENST00000479458 PRELPP51888 382 aa10.99□□□□□ -0.65
HMGCL-205ENST00000479458 DNAJC5GQ8N7S2 189 aa10.99□□□□□ -0.65
HMGCL-205ENST00000479458 MINK1Q8N4C8 1332 aaPredicted RBP10.99□□□□□ -0.65
HMGCL-205ENST00000479458 CLSPNQ9HAW4 1339 aa10.99□□□□□ -0.65
HMGCL-205ENST00000479458 TOPAZ1Q8N9V7 1692 aa10.98□□□□□ -0.65
HMGCL-205ENST00000479458 MARCH10Q8NA82 808 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-205ENST00000479458 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-205ENST00000479458 POLR3AO14802 1390 aaPredicted RBP10.98□□□□□ -0.65
HMGCL-205ENST00000479458 ROCK2O75116 1388 aaKnown RBP10.98□□□□□ -0.65
HMGCL-205ENST00000479458 NHSQ6T4R5 1651 aa10.96□□□□□ -0.65
HMGCL-205ENST00000479458 BRD4O60885 1362 aaPredicted RBP10.96□□□□□ -0.65
HMGCL-205ENST00000479458 CENPJQ9HC77 1338 aaPredicted RBP10.96□□□□□ -0.65
HMGCL-205ENST00000479458 POLD1P28340 1107 aa10.96□□□□□ -0.65
HMGCL-205ENST00000479458 YBX3P16989 372 aaKnown RBP eCLIP10.95□□□□□ -0.66
HMGCL-205ENST00000479458 PCDH10Q9P2E7 1040 aa10.95□□□□□ -0.66
HMGCL-205ENST00000479458 QRICH2Q9H0J4 1663 aa10.95□□□□□ -0.66
HMGCL-205ENST00000479458 GCP02774 474 aa10.94□□□□□ -0.66
HMGCL-205ENST00000479458 COL18A1P39060 1754 aa10.93□□□□□ -0.66
HMGCL-205ENST00000479458 KIF3CO14782 793 aa10.93□□□□□ -0.66
HMGCL-205ENST00000479458 COL13A1Q5TAT6 717 aaPredicted RBP10.93□□□□□ -0.66
HMGCL-205ENST00000479458 NLRP13Q86W25 1043 aa10.93□□□□□ -0.66
HMGCL-205ENST00000479458 JMYQ8N9B5 988 aa10.93□□□□□ -0.66
HMGCL-205ENST00000479458 NLGN2Q8NFZ4 835 aa10.93□□□□□ -0.66
HMGCL-205ENST00000479458 WDR17Q8IZU2 1322 aa10.92□□□□□ -0.66
HMGCL-205ENST00000479458 PLEKHG3A1L390 1219 aa10.92□□□□□ -0.66
HMGCL-205ENST00000479458 PELP1Q8IZL8 1130 aaKnown RBP10.92□□□□□ -0.66
HMGCL-205ENST00000479458 ABTB2Q8N961 1025 aa10.92□□□□□ -0.66
HMGCL-205ENST00000479458 CCER1Q8TC90 406 aaPredicted RBP10.92□□□□□ -0.66
HMGCL-205ENST00000479458 AKT1S1Q96B36 256 aa10.92□□□□□ -0.66
HMGCL-205ENST00000479458 NUDT16Q96DE0 195 aaKnown RBP10.92□□□□□ -0.66
HMGCL-205ENST00000479458 CDK19Q9BWU1 502 aa10.92□□□□□ -0.66
HMGCL-205ENST00000479458 CARD11Q9BXL7 1154 aa10.92□□□□□ -0.66
HMGCL-205ENST00000479458 PCNTO95613 3336 aa10.92□□□□□ -0.66
HMGCL-205ENST00000479458 MKRN4PQ13434 485 aaPredicted RBP10.91□□□□□ -0.66
HMGCL-205ENST00000479458 ZNF827Q17R98 1081 aa10.91□□□□□ -0.66
HMGCL-205ENST00000479458 TIMELESSQ9UNS1 1208 aa10.91□□□□□ -0.66
HMGCL-205ENST00000479458 EXOC5O00471 708 aa10.9□□□□□ -0.66
HMGCL-205ENST00000479458 SLC27A3Q5K4L6 730 aa10.9□□□□□ -0.66
HMGCL-205ENST00000479458 NUTM2GQ5VZR2 741 aa10.9□□□□□ -0.66
HMGCL-205ENST00000479458 TOM1L2Q6ZVM7 507 aa10.9□□□□□ -0.66
HMGCL-205ENST00000479458 CCDC61Q9Y6R9 512 aa10.9□□□□□ -0.66
HMGCL-205ENST00000479458 BTAF1O14981 1849 aa10.9□□□□□ -0.66
HMGCL-205ENST00000479458 SLIT3O75094 1523 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 ACEP12821 1306 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 TNS4Q8IZW8 715 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 CARD10Q9BWT7 1032 aa10.89□□□□□ -0.67
HMGCL-205ENST00000479458 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms