RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 COL18A1P39060 1754 aa25.13■■□□□ 1.61
RUNX3-204ENST00000479341 PEAK1Q9H792 1746 aa25.13■■□□□ 1.61
RUNX3-204ENST00000479341 HOXC9P31274 260 aa25.13■■□□□ 1.61
RUNX3-204ENST00000479341 RTL1A6NKG5 1358 aa25.13■■□□□ 1.61
RUNX3-204ENST00000479341 PPM1GO15355 546 aaPredicted RBP25.12■■□□□ 1.61
RUNX3-204ENST00000479341 FLT4P35916 1363 aa25.12■■□□□ 1.61
RUNX3-204ENST00000479341 ABCC6O95255 1503 aa25.12■■□□□ 1.61
RUNX3-204ENST00000479341 INSRP06213 1382 aa25.11■■□□□ 1.61
RUNX3-204ENST00000479341 MEX3CQ5U5Q3 659 aaKnown RBP25.11■■□□□ 1.61
RUNX3-204ENST00000479341 AXIN2Q9Y2T1 843 aa25.11■■□□□ 1.61
RUNX3-204ENST00000479341 CDK12Q9NYV4 1490 aaPredicted RBP25.1■■□□□ 1.61
RUNX3-204ENST00000479341 HSP90AB2PQ58FF8 381 aa25.1■■□□□ 1.61
RUNX3-204ENST00000479341 COL14A1Q05707 1796 aaKnown RBP25.09■■□□□ 1.61
RUNX3-204ENST00000479341 MIER1Q8N108 512 aa25.09■■□□□ 1.61
RUNX3-204ENST00000479341 LMO7Q8WWI1 1683 aa25.09■■□□□ 1.61
RUNX3-204ENST00000479341 BLMP54132 1417 aaPredicted RBP25.08■■□□□ 1.61
RUNX3-204ENST00000479341 CAMTA1Q9Y6Y1 1673 aa25.07■■□□□ 1.6
RUNX3-204ENST00000479341 NGLY1Q96IV0 654 aa25.06■■□□□ 1.6
RUNX3-204ENST00000479341 C8orf37Q96NL8 207 aa25.06■■□□□ 1.6
RUNX3-204ENST00000479341 FNBP4Q8N3X1 1017 aaPredicted RBP25.05■■□□□ 1.6
RUNX3-204ENST00000479341 CFAP53Q96M91 514 aa25.05■■□□□ 1.6
RUNX3-204ENST00000479341 SLIT2O94813 1529 aa25.05■■□□□ 1.6
RUNX3-204ENST00000479341 COL3A1P02461 1466 aaPredicted RBP25.04■■□□□ 1.6
RUNX3-204ENST00000479341 BTG4Q9NY30 223 aa25.04■■□□□ 1.6
RUNX3-204ENST00000479341 CCDC184Q52MB2 194 aa25.03■■□□□ 1.6
RUNX3-204ENST00000479341 RGPD5Q99666 1765 aa25.03■■□□□ 1.6
RUNX3-204ENST00000479341 EIF4A2Q14240 407 aaKnown RBP25.02■■□□□ 1.6
RUNX3-204ENST00000479341 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
RUNX3-204ENST00000479341 COL5A2P05997 1499 aaPredicted RBP25.02■■□□□ 1.6
RUNX3-204ENST00000479341 PLCH1Q4KWH8 1693 aa25.01■■□□□ 1.59
RUNX3-204ENST00000479341 IL13P35225 146 aa25.01■■□□□ 1.59
RUNX3-204ENST00000479341 ERBB3P21860 1342 aa25.01■■□□□ 1.59
RUNX3-204ENST00000479341 CCER2I3L3R5 266 aa25■■□□□ 1.59
RUNX3-204ENST00000479341 DIAPH1O60610 1272 aaKnown RBP25■■□□□ 1.59
RUNX3-204ENST00000479341 ZNF772Q68DY9 489 aaPredicted RBP25■■□□□ 1.59
RUNX3-204ENST00000479341 LTV1Q96GA3 475 aaPredicted RBP25■■□□□ 1.59
RUNX3-204ENST00000479341 NWD2Q9ULI1 1742 aa24.99■■□□□ 1.59
RUNX3-204ENST00000479341 BCL9LQ86UU0 1499 aa24.98■■□□□ 1.59
RUNX3-204ENST00000479341 EVA1CP58658 441 aa24.98■■□□□ 1.59
RUNX3-204ENST00000479341 UNC5CLQ8IV45 518 aa24.98■■□□□ 1.59
RUNX3-204ENST00000479341 AFF2P51816 1311 aa24.97■■□□□ 1.59
RUNX3-204ENST00000479341 WDR17Q8IZU2 1322 aa24.97■■□□□ 1.59
RUNX3-204ENST00000479341 STRN4Q9NRL3 753 aa24.97■■□□□ 1.59
RUNX3-204ENST00000479341 NRAPQ86VF7 1730 aa24.97■■□□□ 1.59
RUNX3-204ENST00000479341 MRS2Q9HD23 443 aa24.96■■□□□ 1.59
RUNX3-204ENST00000479341 USP21Q9UK80 565 aa24.96■■□□□ 1.59
RUNX3-204ENST00000479341 CSB-PGBD3P0DP91 1061 aa24.95■■□□□ 1.58
RUNX3-204ENST00000479341 LARP1Q6PKG0 1096 aaKnown RBP24.95■■□□□ 1.58
RUNX3-204ENST00000479341 EYA1Q99502 592 aa24.94■■□□□ 1.58
RUNX3-204ENST00000479341 NBPF6Q5VWK0 638 aa24.93■■□□□ 1.58
RUNX3-204ENST00000479341 NBPF4Q96M43 638 aa24.93■■□□□ 1.58
RUNX3-204ENST00000479341 NUDCQ9Y266 331 aa24.93■■□□□ 1.58
RUNX3-204ENST00000479341 VPS72Q15906 364 aa24.91■■□□□ 1.58
RUNX3-204ENST00000479341 TOM1L2Q6ZVM7 507 aa24.91■■□□□ 1.58
RUNX3-204ENST00000479341 CARD10Q9BWT7 1032 aa24.91■■□□□ 1.58
RUNX3-204ENST00000479341 NLRP2Q9NX02 1062 aa24.91■■□□□ 1.58
RUNX3-204ENST00000479341 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.91■■□□□ 1.58
RUNX3-204ENST00000479341 IGSF1Q8N6C5 1336 aa24.9■■□□□ 1.58
RUNX3-204ENST00000479341 CRB1P82279 1406 aa24.9■■□□□ 1.58
RUNX3-204ENST00000479341 PNISRQ8TF01 805 aaKnown RBP24.9■■□□□ 1.58
RUNX3-204ENST00000479341 FAM208AQ9UK61 1670 aaKnown RBP24.9■■□□□ 1.58
RUNX3-204ENST00000479341 RGPD1P0DJD0 1748 aa24.89■■□□□ 1.58
RUNX3-204ENST00000479341 NCAPD2Q15021 1401 aa24.89■■□□□ 1.58
RUNX3-204ENST00000479341 U2SURPO15042 1029 aaKnown RBP24.89■■□□□ 1.58
RUNX3-204ENST00000479341 RXRBP28702 533 aa24.88■■□□□ 1.57
RUNX3-204ENST00000479341 RGPD2P0DJD1 1756 aa24.88■■□□□ 1.57
RUNX3-204ENST00000479341 SPATA31A5Q5VU36 1347 aa24.87■■□□□ 1.57
RUNX3-204ENST00000479341 SPATA31A7Q8IWB4 1347 aa24.87■■□□□ 1.57
RUNX3-204ENST00000479341 SPATA31A1Q5TZJ5 1347 aa24.86■■□□□ 1.57
RUNX3-204ENST00000479341 ATRNO75882 1429 aa24.86■■□□□ 1.57
RUNX3-204ENST00000479341 U2AF1L5P0DN76 240 aaPredicted RBP24.86■■□□□ 1.57
RUNX3-204ENST00000479341 U2AF1Q01081 240 aaKnown RBP eCLIP24.86■■□□□ 1.57
RUNX3-204ENST00000479341 USHBP1Q8N6Y0 703 aa24.86■■□□□ 1.57
RUNX3-204ENST00000479341 TRPC5Q9UL62 973 aaPredicted RBP24.86■■□□□ 1.57
RUNX3-204ENST00000479341 SULT6B1Q6IMI4 303 aa24.85■■□□□ 1.57
RUNX3-204ENST00000479341 KDRP35968 1356 aa24.84■■□□□ 1.57
RUNX3-204ENST00000479341 WDR43Q15061 677 aaKnown RBP eCLIP24.84■■□□□ 1.57
RUNX3-204ENST00000479341 AEBP1Q8IUX7 1158 aa24.84■■□□□ 1.57
RUNX3-204ENST00000479341 QTRT2Q9H974 415 aaKnown RBP24.83■■□□□ 1.57
RUNX3-204ENST00000479341 ADAMTS8Q9UP79 889 aa24.83■■□□□ 1.57
RUNX3-204ENST00000479341 CCDC9Q9Y3X0 531 aaKnown RBP24.83■■□□□ 1.57
RUNX3-204ENST00000479341 HMOX1P09601 288 aa24.82■■□□□ 1.56
RUNX3-204ENST00000479341 TCP11L2Q8N4U5 519 aa24.82■■□□□ 1.56
RUNX3-204ENST00000479341 FCHSD2O94868 740 aa24.81■■□□□ 1.56
RUNX3-204ENST00000479341 GJD4Q96KN9 370 aaPredicted RBP24.81■■□□□ 1.56
RUNX3-204ENST00000479341 USP35Q9P2H5 1018 aa24.81■■□□□ 1.56
RUNX3-204ENST00000479341 THRAP3Q9Y2W1 955 aaKnown RBP24.81■■□□□ 1.56
RUNX3-204ENST00000479341 UPF1Q92900 1129 aaKnown RBP eCLIP24.8■■□□□ 1.56
RUNX3-204ENST00000479341 RSPH6AQ9H0K4 717 aa24.8■■□□□ 1.56
RUNX3-204ENST00000479341 BARGINQ6ZT62 677 aa24.79■■□□□ 1.56
RUNX3-204ENST00000479341 FAM9BQ8IZU0 186 aa24.77■■□□□ 1.56
RUNX3-204ENST00000479341 DISP2A7MBM2 1401 aa24.77■■□□□ 1.56
RUNX3-204ENST00000479341 GLI3P10071 1580 aa24.76■■□□□ 1.55
RUNX3-204ENST00000479341 IL2RBP14784 551 aa24.75■■□□□ 1.55
RUNX3-204ENST00000479341 PRKAR2BP31323 418 aa24.75■■□□□ 1.55
RUNX3-204ENST00000479341 RAPGEF4Q8WZA2 1011 aa24.75■■□□□ 1.55
RUNX3-204ENST00000479341 PLEKHF1Q96S99 279 aa24.75■■□□□ 1.55
RUNX3-204ENST00000479341 TATP17735 454 aaPredicted RBP24.74■■□□□ 1.55
RUNX3-204ENST00000479341 CDCA7Q9BWT1 371 aaPredicted RBP24.74■■□□□ 1.55
RUNX3-204ENST00000479341 PNNQ9H307 717 aaKnown RBP24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms