RNA–Protein interactions for RNA: ENST00000478946.1

STAMBP-208, Transcript of STAM binding protein, humanhuman

TSL 3

Gene STAMBP, Length 955 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STAMBP-208ENST00000478946 CLP1Q92989 425 aaKnown RBP12.82□□□□□ -0.36
STAMBP-208ENST00000478946 CDCA7Q9BWT1 371 aaPredicted RBP12.82□□□□□ -0.36
STAMBP-208ENST00000478946 IFT140Q96RY7 1462 aa12.82□□□□□ -0.36
STAMBP-208ENST00000478946 PTK2Q05397 1052 aa12.81□□□□□ -0.36
STAMBP-208ENST00000478946 SLFNL1Q499Z3 407 aa12.81□□□□□ -0.36
STAMBP-208ENST00000478946 PDXDC2PQ6P474 469 aa12.81□□□□□ -0.36
STAMBP-208ENST00000478946 LARP1Q6PKG0 1096 aaKnown RBP12.81□□□□□ -0.36
STAMBP-208ENST00000478946 ZNF687Q8N1G0 1237 aa12.81□□□□□ -0.36
STAMBP-208ENST00000478946 SLAIN2Q9P270 581 aa12.81□□□□□ -0.36
STAMBP-208ENST00000478946 TOP2AP11388 1531 aaKnown RBP12.8□□□□□ -0.36
STAMBP-208ENST00000478946 NCOA4Q13772 614 aa12.8□□□□□ -0.36
STAMBP-208ENST00000478946 ARMC2Q8NEN0 867 aa12.8□□□□□ -0.36
STAMBP-208ENST00000478946 FAM200AQ8TCP9 573 aa12.8□□□□□ -0.36
STAMBP-208ENST00000478946 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
STAMBP-208ENST00000478946 RASA1P20936 1047 aa12.79□□□□□ -0.36
STAMBP-208ENST00000478946 RBM47A0AV96 593 aaKnown RBP12.78□□□□□ -0.36
STAMBP-208ENST00000478946 NR1I2O75469 434 aa12.78□□□□□ -0.36
STAMBP-208ENST00000478946 ERCC3P19447 782 aa12.78□□□□□ -0.36
STAMBP-208ENST00000478946 CTHP32929 405 aa12.78□□□□□ -0.36
STAMBP-208ENST00000478946 RNF135Q8IUD6 432 aa12.78□□□□□ -0.36
STAMBP-208ENST00000478946 PLPP7Q8NBV4 271 aa12.78□□□□□ -0.36
STAMBP-208ENST00000478946 OCSTAMPQ9BR26 566 aa12.78□□□□□ -0.36
STAMBP-208ENST00000478946 EVA1BQ9NVM1 165 aa12.78□□□□□ -0.36
STAMBP-208ENST00000478946 ANKMY2Q8IV38 441 aa12.77□□□□□ -0.37
STAMBP-208ENST00000478946 APLP1P51693 650 aa12.76□□□□□ -0.37
STAMBP-208ENST00000478946 MAP7D1Q3KQU3 841 aa12.76□□□□□ -0.37
STAMBP-208ENST00000478946 CCNYL3P0C7X3 344 aa12.75□□□□□ -0.37
STAMBP-208ENST00000478946 MSS51Q4VC12 460 aa12.75□□□□□ -0.37
STAMBP-208ENST00000478946 TOPBP1Q92547 1522 aa12.75□□□□□ -0.37
STAMBP-208ENST00000478946 ARAP1Q96P48 1450 aa12.75□□□□□ -0.37
STAMBP-208ENST00000478946 PCDHB3Q9Y5E6 796 aa12.75□□□□□ -0.37
STAMBP-208ENST00000478946 DXOO77932 396 aaKnown RBP12.74□□□□□ -0.37
STAMBP-208ENST00000478946 PPP4CP60510 307 aa12.74□□□□□ -0.37
STAMBP-208ENST00000478946 KCNH2Q12809 1159 aa12.74□□□□□ -0.37
STAMBP-208ENST00000478946 SWI5Q1ZZU3 235 aa12.74□□□□□ -0.37
STAMBP-208ENST00000478946 NBPF14Q5TI25 921 aa12.74□□□□□ -0.37
STAMBP-208ENST00000478946 DNAJC14Q6Y2X3 702 aaPredicted RBP12.74□□□□□ -0.37
STAMBP-208ENST00000478946 PCDHB9Q9Y5E1 797 aa12.74□□□□□ -0.37
STAMBP-208ENST00000478946 SOWAHDA6NJG2 315 aa12.73□□□□□ -0.37
STAMBP-208ENST00000478946 UNCXA6NJT0 531 aa12.73□□□□□ -0.37
STAMBP-208ENST00000478946 IGSF3O75054 1194 aa12.73□□□□□ -0.37
STAMBP-208ENST00000478946 TRAF7Q6Q0C0 670 aa12.73□□□□□ -0.37
STAMBP-208ENST00000478946 SOWAHBA6NEL2 793 aa12.72□□□□□ -0.37
STAMBP-208ENST00000478946 ATP2B4P23634 1241 aa12.72□□□□□ -0.37
STAMBP-208ENST00000478946 EML3Q32P44 896 aa12.72□□□□□ -0.37
STAMBP-208ENST00000478946 TRIM50Q86XT4 487 aa12.71□□□□□ -0.37
STAMBP-208ENST00000478946 OGFOD1Q8N543 542 aa12.71□□□□□ -0.37
STAMBP-208ENST00000478946 ANKK1Q8NFD2 765 aa12.71□□□□□ -0.37
STAMBP-208ENST00000478946 C1orf216Q8TAB5 229 aa12.71□□□□□ -0.37
STAMBP-208ENST00000478946 NUDT12Q9BQG2 462 aa12.71□□□□□ -0.37
STAMBP-208ENST00000478946 EIF4G3O43432 1585 aaKnown RBP12.7□□□□□ -0.38
STAMBP-208ENST00000478946 MMP16P51512 607 aa12.7□□□□□ -0.38
STAMBP-208ENST00000478946 DPYDQ12882 1025 aa12.7□□□□□ -0.38
STAMBP-208ENST00000478946 ADGRD1Q6QNK2 874 aa12.7□□□□□ -0.38
STAMBP-208ENST00000478946 FAM160A2Q8N612 972 aaPredicted RBP12.7□□□□□ -0.38
STAMBP-208ENST00000478946 TSR3Q9UJK0 312 aaKnown RBP12.7□□□□□ -0.38
STAMBP-208ENST00000478946 MYT1LQ9UL68 1186 aa12.7□□□□□ -0.38
STAMBP-208ENST00000478946 HPS5Q9UPZ3 1129 aa12.7□□□□□ -0.38
STAMBP-208ENST00000478946 PRDM2Q13029 1718 aa12.7□□□□□ -0.38
STAMBP-208ENST00000478946 CCDC88BA6NC98 1476 aa12.7□□□□□ -0.38
STAMBP-208ENST00000478946 AQRO60306 1485 aaKnown RBP eCLIP12.7□□□□□ -0.385e-8■■■□□ 17.3
STAMBP-208ENST00000478946 HRO43593 1189 aa12.69□□□□□ -0.38
STAMBP-208ENST00000478946 ATP1A2P50993 1020 aa12.69□□□□□ -0.38
STAMBP-208ENST00000478946 EMP3P54852 163 aa12.69□□□□□ -0.38
STAMBP-208ENST00000478946 CLDN10P78369 228 aa12.69□□□□□ -0.38
STAMBP-208ENST00000478946 ADAM32Q8TC27 787 aa12.69□□□□□ -0.38
STAMBP-208ENST00000478946 OTUD5Q96G74 571 aa12.69□□□□□ -0.38
STAMBP-208ENST00000478946 LARGE2Q8N3Y3 721 aa12.68□□□□□ -0.38
STAMBP-208ENST00000478946 DNAAF2Q9NVR5 837 aaKnown RBP12.68□□□□□ -0.38
STAMBP-208ENST00000478946 ABCC8Q09428 1581 aa12.68□□□□□ -0.38
STAMBP-208ENST00000478946 SERPINB4P48594 390 aa12.67□□□□□ -0.38
STAMBP-208ENST00000478946 ARHGAP9Q9BRR9 750 aa12.67□□□□□ -0.38
STAMBP-208ENST00000478946 NOD1Q9Y239 953 aa12.67□□□□□ -0.38
STAMBP-208ENST00000478946 DKK1O94907 266 aa12.66□□□□□ -0.38
STAMBP-208ENST00000478946 TSGA10IPQ3SY00 556 aa12.66□□□□□ -0.38
STAMBP-208ENST00000478946 IGSF5Q9NSI5 407 aa12.66□□□□□ -0.38
STAMBP-208ENST00000478946 CHD1O14646 1710 aa12.65□□□□□ -0.38
STAMBP-208ENST00000478946 LOC105371045A0A1W2PR82 267 aa12.65□□□□□ -0.38
STAMBP-208ENST00000478946 NOM1Q5C9Z4 860 aaKnown RBP12.65□□□□□ -0.38
STAMBP-208ENST00000478946 SH3BP5LQ7L8J4 393 aa12.65□□□□□ -0.38
STAMBP-208ENST00000478946 SIX5Q8N196 739 aa12.65□□□□□ -0.38
STAMBP-208ENST00000478946 ZNF594Q96JF6 807 aaPredicted RBP12.65□□□□□ -0.38
STAMBP-208ENST00000478946 SPSB2Q99619 263 aa12.65□□□□□ -0.38
STAMBP-208ENST00000478946 TARBP1Q13395 1621 aaKnown RBP12.65□□□□□ -0.38
STAMBP-208ENST00000478946 DNMBPQ6XZF7 1577 aa12.64□□□□□ -0.39
STAMBP-208ENST00000478946 ZBTB7BO15156 539 aaPredicted RBP12.64□□□□□ -0.39
STAMBP-208ENST00000478946 ST18O60284 1047 aa12.64□□□□□ -0.39
STAMBP-208ENST00000478946 LSM11P83369 360 aaKnown RBP eCLIP12.64□□□□□ -0.39
STAMBP-208ENST00000478946 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
STAMBP-208ENST00000478946 FAM205CA6NFA0 338 aa12.63□□□□□ -0.39
STAMBP-208ENST00000478946 GOLGA8CPA6NN73 597 aa12.63□□□□□ -0.39
STAMBP-208ENST00000478946 BCAMP50895 628 aa12.63□□□□□ -0.39
STAMBP-208ENST00000478946 ZBTB33Q86T24 672 aa12.63□□□□□ -0.39
STAMBP-208ENST00000478946 MARSP56192 900 aaKnown RBP12.61□□□□□ -0.39
STAMBP-208ENST00000478946 TAS1R3Q7RTX0 852 aa12.61□□□□□ -0.39
STAMBP-208ENST00000478946 DZIP3Q86Y13 1208 aaKnown RBP12.61□□□□□ -0.39
STAMBP-208ENST00000478946 MARVELD3Q96A59 401 aa12.61□□□□□ -0.39
STAMBP-208ENST00000478946 CCDC85AQ96PX6 553 aaPredicted RBP12.61□□□□□ -0.39
STAMBP-208ENST00000478946 DOLKQ9UPQ8 538 aa12.61□□□□□ -0.39
STAMBP-208ENST00000478946 POLA1P09884 1462 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms