RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 RGPD5Q99666 1765 aa23.68■■□□□ 1.38
CDK11A-215ENST00000478901 ANKRD26Q9UPS8 1709 aa23.68■■□□□ 1.38
CDK11A-215ENST00000478901 STRN4Q9NRL3 753 aa23.68■■□□□ 1.38
CDK11A-215ENST00000478901 GLI3P10071 1580 aa23.67■■□□□ 1.38
CDK11A-215ENST00000478901 AMER1Q5JTC6 1135 aaPredicted RBP23.67■■□□□ 1.38
CDK11A-215ENST00000478901 COL5A2P05997 1499 aaPredicted RBP23.67■■□□□ 1.38
CDK11A-215ENST00000478901 MAP3K19Q56UN5 1328 aa23.66■■□□□ 1.38
CDK11A-215ENST00000478901 EVA1CP58658 441 aa23.66■■□□□ 1.38
CDK11A-215ENST00000478901 NSD2O96028 1365 aa23.65■■□□□ 1.38
CDK11A-215ENST00000478901 ABCC6O95255 1503 aa23.65■■□□□ 1.38
CDK11A-215ENST00000478901 RRS1Q15050 365 aaKnown RBP23.65■■□□□ 1.38
CDK11A-215ENST00000478901 CCDC9Q9Y3X0 531 aaKnown RBP23.65■■□□□ 1.38
CDK11A-215ENST00000478901 LARP1Q6PKG0 1096 aaKnown RBP23.64■■□□□ 1.37
CDK11A-215ENST00000478901 SPATA31A5Q5VU36 1347 aa23.63■■□□□ 1.37
CDK11A-215ENST00000478901 SPATA31A7Q8IWB4 1347 aa23.63■■□□□ 1.37
CDK11A-215ENST00000478901 IP6K1Q92551 441 aa23.62■■□□□ 1.37
CDK11A-215ENST00000478901 CDK12Q9NYV4 1490 aaPredicted RBP23.62■■□□□ 1.37
CDK11A-215ENST00000478901 SPATA31A1Q5TZJ5 1347 aa23.6■■□□□ 1.37
CDK11A-215ENST00000478901 HOXC9P31274 260 aa23.6■■□□□ 1.37
CDK11A-215ENST00000478901 AMPHP49418 695 aa23.6■■□□□ 1.37
CDK11A-215ENST00000478901 RGS12O14924 1447 aa23.59■■□□□ 1.37
CDK11A-215ENST00000478901 MAP2P11137 1827 aaKnown RBP23.59■■□□□ 1.37
CDK11A-215ENST00000478901 TNNT2P45379 298 aaPredicted RBP23.59■■□□□ 1.37
CDK11A-215ENST00000478901 MORC1Q86VD1 984 aa23.59■■□□□ 1.37
CDK11A-215ENST00000478901 WDR17Q8IZU2 1322 aa23.59■■□□□ 1.37
CDK11A-215ENST00000478901 EMILIN1Q9Y6C2 1016 aa23.58■■□□□ 1.37
CDK11A-215ENST00000478901 PEAK1Q9H792 1746 aa23.58■■□□□ 1.37
CDK11A-215ENST00000478901 BLMP54132 1417 aaPredicted RBP23.58■■□□□ 1.36
CDK11A-215ENST00000478901 CRB1P82279 1406 aa23.58■■□□□ 1.36
CDK11A-215ENST00000478901 RTL1A6NKG5 1358 aa23.57■■□□□ 1.36
CDK11A-215ENST00000478901 NPC1L1Q9UHC9 1359 aa23.57■■□□□ 1.36
CDK11A-215ENST00000478901 ONECUT3O60422 494 aaPredicted RBP23.57■■□□□ 1.36
CDK11A-215ENST00000478901 CC2D1BQ5T0F9 858 aaKnown RBP23.57■■□□□ 1.36
CDK11A-215ENST00000478901 ERBB3P21860 1342 aa23.57■■□□□ 1.36
CDK11A-215ENST00000478901 ANKRD24Q8TF21 1146 aa23.56■■□□□ 1.36
CDK11A-215ENST00000478901 USP35Q9P2H5 1018 aa23.56■■□□□ 1.36
CDK11A-215ENST00000478901 POLKQ9UBT6 870 aa23.56■■□□□ 1.36
CDK11A-215ENST00000478901 CSB-PGBD3P0DP91 1061 aa23.55■■□□□ 1.36
CDK11A-215ENST00000478901 FAM98CQ17RN3 349 aaKnown RBP23.55■■□□□ 1.36
CDK11A-215ENST00000478901 TOM1L2Q6ZVM7 507 aa23.55■■□□□ 1.36
CDK11A-215ENST00000478901 KIF24Q5T7B8 1368 aa23.54■■□□□ 1.36
CDK11A-215ENST00000478901 FLT4P35916 1363 aa23.53■■□□□ 1.36
CDK11A-215ENST00000478901 DDX10Q13206 875 aaKnown RBP23.53■■□□□ 1.36
CDK11A-215ENST00000478901 HSP90AB2PQ58FF8 381 aa23.53■■□□□ 1.36
CDK11A-215ENST00000478901 TCP11L2Q8N4U5 519 aa23.53■■□□□ 1.36
CDK11A-215ENST00000478901 PPM1GO15355 546 aaPredicted RBP23.52■■□□□ 1.36
CDK11A-215ENST00000478901 CNGB1Q14028 1251 aaPredicted RBP23.52■■□□□ 1.36
CDK11A-215ENST00000478901 SEPT12Q8IYM1 358 aa23.52■■□□□ 1.36
CDK11A-215ENST00000478901 LTV1Q96GA3 475 aaPredicted RBP23.52■■□□□ 1.36
CDK11A-215ENST00000478901 BARGINQ6ZT62 677 aa23.51■■□□□ 1.35
CDK11A-215ENST00000478901 CARD10Q9BWT7 1032 aa23.51■■□□□ 1.35
CDK11A-215ENST00000478901 THRAP3Q9Y2W1 955 aaKnown RBP23.51■■□□□ 1.35
CDK11A-215ENST00000478901 INSRP06213 1382 aa23.51■■□□□ 1.35
CDK11A-215ENST00000478901 ZNF316A6NFI3 1004 aaPredicted RBP23.5■■□□□ 1.35
CDK11A-215ENST00000478901 THSD7AQ9UPZ6 1657 aa23.5■■□□□ 1.35
CDK11A-215ENST00000478901 NLRP2Q9NX02 1062 aa23.49■■□□□ 1.35
CDK11A-215ENST00000478901 BRWD3Q6RI45 1802 aa23.49■■□□□ 1.35
CDK11A-215ENST00000478901 SMG6Q86US8 1419 aaKnown RBP23.48■■□□□ 1.35
CDK11A-215ENST00000478901 RGPD2P0DJD1 1756 aa23.47■■□□□ 1.35
CDK11A-215ENST00000478901 A0A0G2JS52 829 aa23.47■■□□□ 1.35
CDK11A-215ENST00000478901 MYT1Q01538 1121 aa23.47■■□□□ 1.35
CDK11A-215ENST00000478901 FAM208AQ9UK61 1670 aaKnown RBP23.47■■□□□ 1.35
CDK11A-215ENST00000478901 WNK3Q9BYP7 1800 aa23.44■■□□□ 1.34
CDK11A-215ENST00000478901 NBPF6Q5VWK0 638 aa23.43■■□□□ 1.34
CDK11A-215ENST00000478901 NBPF4Q96M43 638 aa23.43■■□□□ 1.34
CDK11A-215ENST00000478901 DISP2A7MBM2 1401 aa23.42■■□□□ 1.34
CDK11A-215ENST00000478901 PARP4Q9UKK3 1724 aaKnown RBP23.42■■□□□ 1.34
CDK11A-215ENST00000478901 MTHFSP49914 203 aa23.41■■□□□ 1.34
CDK11A-215ENST00000478901 EIF4A2Q14240 407 aaKnown RBP23.4■■□□□ 1.34
CDK11A-215ENST00000478901 KRT27Q7Z3Y8 459 aa23.4■■□□□ 1.34
CDK11A-215ENST00000478901 USHBP1Q8N6Y0 703 aa23.39■■□□□ 1.33
CDK11A-215ENST00000478901 CDCA7Q9BWT1 371 aaPredicted RBP23.39■■□□□ 1.33
CDK11A-215ENST00000478901 LRRC37A3O60309 1634 aa23.37■■□□□ 1.33
CDK11A-215ENST00000478901 IL2RBP14784 551 aa23.37■■□□□ 1.33
CDK11A-215ENST00000478901 EP400Q96L91 3159 aa23.37■■□□□ 1.33
CDK11A-215ENST00000478901 EYA1Q99502 592 aa23.36■■□□□ 1.33
CDK11A-215ENST00000478901 PARD3Q8TEW0 1356 aa23.36■■□□□ 1.33
CDK11A-215ENST00000478901 PPP2R1AP30153 589 aa23.35■■□□□ 1.33
CDK11A-215ENST00000478901 DDB1Q16531 1140 aa23.35■■□□□ 1.33
CDK11A-215ENST00000478901 FAM182BQ5T319 152 aa23.35■■□□□ 1.33
CDK11A-215ENST00000478901 PDE3BQ13370 1112 aa23.34■■□□□ 1.33
CDK11A-215ENST00000478901 NCAPD2Q15021 1401 aa23.33■■□□□ 1.33
CDK11A-215ENST00000478901 EXOC5O00471 708 aa23.32■■□□□ 1.32
CDK11A-215ENST00000478901 IL13P35225 146 aa23.32■■□□□ 1.32
CDK11A-215ENST00000478901 MEGF6O75095 1541 aa23.32■■□□□ 1.32
CDK11A-215ENST00000478901 IGSF1Q8N6C5 1336 aa23.31■■□□□ 1.32
CDK11A-215ENST00000478901 COL3A1P02461 1466 aaPredicted RBP23.3■■□□□ 1.32
CDK11A-215ENST00000478901 UPF1Q92900 1129 aaKnown RBP eCLIP23.3■■□□□ 1.32
CDK11A-215ENST00000478901 TNS2Q63HR2 1409 aa23.3■■□□□ 1.32
CDK11A-215ENST00000478901 RALBP1Q15311 655 aa23.29■■□□□ 1.32
CDK11A-215ENST00000478901 MARCH10Q8NA82 808 aaPredicted RBP23.29■■□□□ 1.32
CDK11A-215ENST00000478901 RGPD1P0DJD0 1748 aa23.28■■□□□ 1.32
CDK11A-215ENST00000478901 RAPGEF4Q8WZA2 1011 aa23.28■■□□□ 1.32
CDK11A-215ENST00000478901 OVOS2A0A0G2JMS6 1433 aa23.27■■□□□ 1.32
CDK11A-215ENST00000478901 DIAPH1O60610 1272 aaKnown RBP23.27■■□□□ 1.32
CDK11A-215ENST00000478901 TATP17735 454 aaPredicted RBP23.27■■□□□ 1.32
CDK11A-215ENST00000478901 FAM196AQ6ZSG2 479 aa23.25■■□□□ 1.31
CDK11A-215ENST00000478901 AEBP1Q8IUX7 1158 aa23.24■■□□□ 1.31
CDK11A-215ENST00000478901 ZCRB1Q8TBF4 217 aaKnown RBP23.24■■□□□ 1.31
CDK11A-215ENST00000478901 CFAP53Q96M91 514 aa23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms