RNA–Protein interactions for RNA: ENST00000478769.1

NUDCD3-207, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 315 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-207ENST00000478769 RGPD5Q99666 1765 aa18.38■□□□□ 0.53
NUDCD3-207ENST00000478769 RALBP1Q15311 655 aa18.38■□□□□ 0.53
NUDCD3-207ENST00000478769 FLT4P35916 1363 aa18.38■□□□□ 0.53
NUDCD3-207ENST00000478769 KIF24Q5T7B8 1368 aa18.38■□□□□ 0.53
NUDCD3-207ENST00000478769 PPP2R1AP30153 589 aa18.37■□□□□ 0.53
NUDCD3-207ENST00000478769 HOXC9P31274 260 aa18.37■□□□□ 0.53
NUDCD3-207ENST00000478769 AXIN2Q9Y2T1 843 aa18.37■□□□□ 0.53
NUDCD3-207ENST00000478769 BLMP54132 1417 aaPredicted RBP18.37■□□□□ 0.53
NUDCD3-207ENST00000478769 COL5A2P05997 1499 aaPredicted RBP18.37■□□□□ 0.53
NUDCD3-207ENST00000478769 AMPHP49418 695 aa18.36■□□□□ 0.53
NUDCD3-207ENST00000478769 AFF2P51816 1311 aa18.36■□□□□ 0.53
NUDCD3-207ENST00000478769 BCL9LQ86UU0 1499 aa18.36■□□□□ 0.53
NUDCD3-207ENST00000478769 IP6K1Q92551 441 aa18.36■□□□□ 0.53
NUDCD3-207ENST00000478769 NGLY1Q96IV0 654 aa18.36■□□□□ 0.53
NUDCD3-207ENST00000478769 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.36■□□□□ 0.53
NUDCD3-207ENST00000478769 BTG4Q9NY30 223 aa18.36■□□□□ 0.53
NUDCD3-207ENST00000478769 COL3A1P02461 1466 aaPredicted RBP18.35■□□□□ 0.53
NUDCD3-207ENST00000478769 PPM1GO15355 546 aaPredicted RBP18.35■□□□□ 0.53
NUDCD3-207ENST00000478769 FNBP4Q8N3X1 1017 aaPredicted RBP18.35■□□□□ 0.53
NUDCD3-207ENST00000478769 MTHFSP49914 203 aa18.34■□□□□ 0.53
NUDCD3-207ENST00000478769 INSRP06213 1382 aa18.33■□□□□ 0.53
NUDCD3-207ENST00000478769 MYBBP1AQ9BQG0 1328 aaKnown RBP18.33■□□□□ 0.53
NUDCD3-207ENST00000478769 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
NUDCD3-207ENST00000478769 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.52
NUDCD3-207ENST00000478769 ERBB3P21860 1342 aa18.32■□□□□ 0.52
NUDCD3-207ENST00000478769 ANP32CO43423 234 aa18.32■□□□□ 0.52
NUDCD3-207ENST00000478769 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
NUDCD3-207ENST00000478769 ANKRD24Q8TF21 1146 aa18.3■□□□□ 0.52
NUDCD3-207ENST00000478769 USP21Q9UK80 565 aa18.3■□□□□ 0.52
NUDCD3-207ENST00000478769 FAM208AQ9UK61 1670 aaKnown RBP18.3■□□□□ 0.52
NUDCD3-207ENST00000478769 LTV1Q96GA3 475 aaPredicted RBP18.29■□□□□ 0.52
NUDCD3-207ENST00000478769 STRN4Q9NRL3 753 aa18.29■□□□□ 0.52
NUDCD3-207ENST00000478769 ATRNO75882 1429 aa18.29■□□□□ 0.52
NUDCD3-207ENST00000478769 WDR17Q8IZU2 1322 aa18.28■□□□□ 0.52
NUDCD3-207ENST00000478769 LARP1Q6PKG0 1096 aaKnown RBP18.28■□□□□ 0.52
NUDCD3-207ENST00000478769 RGPD2P0DJD1 1756 aa18.27■□□□□ 0.52
NUDCD3-207ENST00000478769 EIF4A2Q14240 407 aaKnown RBP18.27■□□□□ 0.52
NUDCD3-207ENST00000478769 RGS17Q9UGC6 210 aaPredicted RBP18.27■□□□□ 0.52
NUDCD3-207ENST00000478769 RGPD1P0DJD0 1748 aa18.26■□□□□ 0.51
NUDCD3-207ENST00000478769 CRB1P82279 1406 aa18.26■□□□□ 0.51
NUDCD3-207ENST00000478769 GLI3P10071 1580 aa18.25■□□□□ 0.51
NUDCD3-207ENST00000478769 CSB-PGBD3P0DP91 1061 aa18.25■□□□□ 0.51
NUDCD3-207ENST00000478769 EVA1CP58658 441 aa18.25■□□□□ 0.51
NUDCD3-207ENST00000478769 VPS72Q15906 364 aa18.25■□□□□ 0.51
NUDCD3-207ENST00000478769 PHF23Q9BUL5 403 aaPredicted RBP18.25■□□□□ 0.51
NUDCD3-207ENST00000478769 IL13P35225 146 aa18.24■□□□□ 0.51
NUDCD3-207ENST00000478769 ZNF772Q68DY9 489 aaPredicted RBP18.24■□□□□ 0.51
NUDCD3-207ENST00000478769 CFAP53Q96M91 514 aa18.24■□□□□ 0.51
NUDCD3-207ENST00000478769 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
NUDCD3-207ENST00000478769 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
NUDCD3-207ENST00000478769 NCAPD2Q15021 1401 aa18.23■□□□□ 0.51
NUDCD3-207ENST00000478769 TOM1L2Q6ZVM7 507 aa18.23■□□□□ 0.51
NUDCD3-207ENST00000478769 WNK3Q9BYP7 1800 aa18.23■□□□□ 0.51
NUDCD3-207ENST00000478769 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
NUDCD3-207ENST00000478769 DIAPH1O60610 1272 aaKnown RBP18.22■□□□□ 0.51
NUDCD3-207ENST00000478769 CCDC184Q52MB2 194 aa18.22■□□□□ 0.51
NUDCD3-207ENST00000478769 NBPF6Q5VWK0 638 aa18.22■□□□□ 0.51
NUDCD3-207ENST00000478769 NBPF4Q96M43 638 aa18.22■□□□□ 0.51
NUDCD3-207ENST00000478769 NLRP2Q9NX02 1062 aa18.22■□□□□ 0.51
NUDCD3-207ENST00000478769 TRPC5Q9UL62 973 aaPredicted RBP18.22■□□□□ 0.51
NUDCD3-207ENST00000478769 USHBP1Q8N6Y0 703 aa18.21■□□□□ 0.51
NUDCD3-207ENST00000478769 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
NUDCD3-207ENST00000478769 EYA1Q99502 592 aa18.2■□□□□ 0.5
NUDCD3-207ENST00000478769 CARD10Q9BWT7 1032 aa18.2■□□□□ 0.5
NUDCD3-207ENST00000478769 QTRT2Q9H974 415 aaKnown RBP18.2■□□□□ 0.5
NUDCD3-207ENST00000478769 CCDC9Q9Y3X0 531 aaKnown RBP18.2■□□□□ 0.5
NUDCD3-207ENST00000478769 POTEAQ6S8J7 498 aa18.19■□□□□ 0.5
NUDCD3-207ENST00000478769 USP35Q9P2H5 1018 aa18.19■□□□□ 0.5
NUDCD3-207ENST00000478769 DISP2A7MBM2 1401 aa18.18■□□□□ 0.5
NUDCD3-207ENST00000478769 MIER1Q8N108 512 aa18.18■□□□□ 0.5
NUDCD3-207ENST00000478769 GJD4Q96KN9 370 aaPredicted RBP18.18■□□□□ 0.5
NUDCD3-207ENST00000478769 THSD7AQ9UPZ6 1657 aa18.18■□□□□ 0.5
NUDCD3-207ENST00000478769 MEGF6O75095 1541 aa18.18■□□□□ 0.5
NUDCD3-207ENST00000478769 TCP11L2Q8N4U5 519 aa18.17■□□□□ 0.5
NUDCD3-207ENST00000478769 KDRP35968 1356 aa18.17■□□□□ 0.5
NUDCD3-207ENST00000478769 U2SURPO15042 1029 aaKnown RBP18.16■□□□□ 0.5
NUDCD3-207ENST00000478769 AEBP1Q8IUX7 1158 aa18.16■□□□□ 0.5
NUDCD3-207ENST00000478769 MRS2Q9HD23 443 aa18.15■□□□□ 0.5
NUDCD3-207ENST00000478769 LRRC37A3O60309 1634 aa18.15■□□□□ 0.5
NUDCD3-207ENST00000478769 PARP4Q9UKK3 1724 aaKnown RBP18.15■□□□□ 0.5
NUDCD3-207ENST00000478769 RBM6P78332 1123 aaKnown RBP18.14■□□□□ 0.49
NUDCD3-207ENST00000478769 FAM98CQ17RN3 349 aaKnown RBP18.14■□□□□ 0.49
NUDCD3-207ENST00000478769 THRAP3Q9Y2W1 955 aaKnown RBP18.14■□□□□ 0.49
NUDCD3-207ENST00000478769 HMOX1P09601 288 aa18.13■□□□□ 0.49
NUDCD3-207ENST00000478769 SULT6B1Q6IMI4 303 aa18.13■□□□□ 0.49
NUDCD3-207ENST00000478769 BARGINQ6ZT62 677 aa18.13■□□□□ 0.49
NUDCD3-207ENST00000478769 NUDCQ9Y266 331 aa18.13■□□□□ 0.49
NUDCD3-207ENST00000478769 OVOS2A0A0G2JMS6 1433 aa18.13■□□□□ 0.49
NUDCD3-207ENST00000478769 RGS12O14924 1447 aa18.13■□□□□ 0.49
NUDCD3-207ENST00000478769 U2AF1L5P0DN76 240 aaPredicted RBP18.12■□□□□ 0.49
NUDCD3-207ENST00000478769 U2AF1Q01081 240 aaKnown RBP eCLIP18.12■□□□□ 0.49
NUDCD3-207ENST00000478769 CCER2I3L3R5 266 aa18.11■□□□□ 0.49
NUDCD3-207ENST00000478769 RXRBP28702 533 aa18.11■□□□□ 0.49
NUDCD3-207ENST00000478769 PKD1L3Q7Z443 1732 aa18.11■□□□□ 0.49
NUDCD3-207ENST00000478769 SHANK3Q9BYB0 1731 aa18.1■□□□□ 0.49
NUDCD3-207ENST00000478769 TNS2Q63HR2 1409 aa18.1■□□□□ 0.49
NUDCD3-207ENST00000478769 IL2RBP14784 551 aa18.1■□□□□ 0.49
NUDCD3-207ENST00000478769 RSPH6AQ9H0K4 717 aa18.1■□□□□ 0.49
NUDCD3-207ENST00000478769 ONECUT3O60422 494 aaPredicted RBP18.09■□□□□ 0.49
NUDCD3-207ENST00000478769 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms