RNA–Protein interactions for RNA: ENST00000478737.5

SCAMP3-206, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 3

Gene SCAMP3, Length 649 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-206ENST00000478737 NRAPQ86VF7 1730 aa13.79□□□□□ -0.2
SCAMP3-206ENST00000478737 SOX12O15370 315 aa13.79□□□□□ -0.2
SCAMP3-206ENST00000478737 TCP11L2Q8N4U5 519 aa13.79□□□□□ -0.2
SCAMP3-206ENST00000478737 KRT27Q7Z3Y8 459 aa13.78□□□□□ -0.2
SCAMP3-206ENST00000478737 WDR17Q8IZU2 1322 aa13.78□□□□□ -0.2
SCAMP3-206ENST00000478737 USP54Q70EL1 1684 aa13.78□□□□□ -0.2
SCAMP3-206ENST00000478737 CRB1P82279 1406 aa13.77□□□□□ -0.21
SCAMP3-206ENST00000478737 CCDC125Q86Z20 511 aa13.77□□□□□ -0.21
SCAMP3-206ENST00000478737 IP6K1Q92551 441 aa13.77□□□□□ -0.21
SCAMP3-206ENST00000478737 GGNBP2Q9H3C7 697 aa13.77□□□□□ -0.21
SCAMP3-206ENST00000478737 ANKRD26Q9UPS8 1709 aa13.77□□□□□ -0.21
SCAMP3-206ENST00000478737 COL18A1P39060 1754 aa13.76□□□□□ -0.21
SCAMP3-206ENST00000478737 ABCC6O95255 1503 aa13.76□□□□□ -0.21
SCAMP3-206ENST00000478737 ZBTB7CA1YPR0 619 aa13.76□□□□□ -0.21
SCAMP3-206ENST00000478737 CARD10Q9BWT7 1032 aa13.76□□□□□ -0.21
SCAMP3-206ENST00000478737 PANK3Q9H999 370 aa13.76□□□□□ -0.21
SCAMP3-206ENST00000478737 CGNL1Q0VF96 1302 aa13.75□□□□□ -0.21
SCAMP3-206ENST00000478737 KIF7Q2M1P5 1343 aa13.75□□□□□ -0.21
SCAMP3-206ENST00000478737 TOM1L2Q6ZVM7 507 aa13.75□□□□□ -0.21
SCAMP3-206ENST00000478737 POLR3GLQ9BT43 218 aa13.75□□□□□ -0.21
SCAMP3-206ENST00000478737 USP35Q9P2H5 1018 aa13.75□□□□□ -0.21
SCAMP3-206ENST00000478737 NSD3Q9BZ95 1437 aa13.74□□□□□ -0.21
SCAMP3-206ENST00000478737 MAP3K19Q56UN5 1328 aa13.74□□□□□ -0.21
SCAMP3-206ENST00000478737 FBLN1P23142 703 aa13.74□□□□□ -0.21
SCAMP3-206ENST00000478737 CDCA7Q9BWT1 371 aaPredicted RBP13.74□□□□□ -0.21
SCAMP3-206ENST00000478737 ERBB3P21860 1342 aa13.73□□□□□ -0.21
SCAMP3-206ENST00000478737 HOXC9P31274 260 aa13.72□□□□□ -0.21
SCAMP3-206ENST00000478737 BLMP54132 1417 aaPredicted RBP13.72□□□□□ -0.21
SCAMP3-206ENST00000478737 CCDC7Q96M83 1385 aa13.71□□□□□ -0.21
SCAMP3-206ENST00000478737 LTN1O94822 1766 aa13.71□□□□□ -0.21
SCAMP3-206ENST00000478737 A0A0G2JS52 829 aa13.71□□□□□ -0.21
SCAMP3-206ENST00000478737 CSB-PGBD3P0DP91 1061 aa13.71□□□□□ -0.21
SCAMP3-206ENST00000478737 MYT1Q01538 1121 aa13.71□□□□□ -0.21
SCAMP3-206ENST00000478737 ANKRD24Q8TF21 1146 aa13.71□□□□□ -0.21
SCAMP3-206ENST00000478737 THSD7AQ9UPZ6 1657 aa13.71□□□□□ -0.21
SCAMP3-206ENST00000478737 KIF24Q5T7B8 1368 aa13.71□□□□□ -0.22
SCAMP3-206ENST00000478737 PER1O15534 1290 aaPredicted RBP13.7□□□□□ -0.22
SCAMP3-206ENST00000478737 AMPHP49418 695 aa13.7□□□□□ -0.22
SCAMP3-206ENST00000478737 RRS1Q15050 365 aaKnown RBP13.7□□□□□ -0.22
SCAMP3-206ENST00000478737 FAM196AQ6ZSG2 479 aa13.7□□□□□ -0.22
SCAMP3-206ENST00000478737 PDE3BQ13370 1112 aa13.69□□□□□ -0.22
SCAMP3-206ENST00000478737 EP400Q96L91 3159 aa13.69□□□□□ -0.22
SCAMP3-206ENST00000478737 RTL1A6NKG5 1358 aa13.69□□□□□ -0.22
SCAMP3-206ENST00000478737 WASHC2AQ641Q2 1341 aa13.68□□□□□ -0.22
SCAMP3-206ENST00000478737 DISP2A7MBM2 1401 aa13.68□□□□□ -0.22
SCAMP3-206ENST00000478737 ZNF316A6NFI3 1004 aaPredicted RBP13.68□□□□□ -0.22
SCAMP3-206ENST00000478737 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
SCAMP3-206ENST00000478737 NSD2O96028 1365 aa13.68□□□□□ -0.22
SCAMP3-206ENST00000478737 DDB1Q16531 1140 aa13.67□□□□□ -0.22
SCAMP3-206ENST00000478737 HSP90AB2PQ58FF8 381 aa13.67□□□□□ -0.22
SCAMP3-206ENST00000478737 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
SCAMP3-206ENST00000478737 FAM182BQ5T319 152 aa13.67□□□□□ -0.22
SCAMP3-206ENST00000478737 POLKQ9UBT6 870 aa13.67□□□□□ -0.22
SCAMP3-206ENST00000478737 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
SCAMP3-206ENST00000478737 INSRP06213 1382 aa13.67□□□□□ -0.22
SCAMP3-206ENST00000478737 EXOC5O00471 708 aa13.65□□□□□ -0.22
SCAMP3-206ENST00000478737 IL2RBP14784 551 aa13.65□□□□□ -0.22
SCAMP3-206ENST00000478737 EMILIN1Q9Y6C2 1016 aa13.65□□□□□ -0.22
SCAMP3-206ENST00000478737 FLT4P35916 1363 aa13.65□□□□□ -0.22
SCAMP3-206ENST00000478737 RGPD5Q99666 1765 aa13.65□□□□□ -0.22
SCAMP3-206ENST00000478737 BCL9O00512 1426 aa13.64□□□□□ -0.23
SCAMP3-206ENST00000478737 BRWD3Q6RI45 1802 aa13.64□□□□□ -0.23
SCAMP3-206ENST00000478737 NBPF6Q5VWK0 638 aa13.64□□□□□ -0.23
SCAMP3-206ENST00000478737 MARCH10Q8NA82 808 aaPredicted RBP13.64□□□□□ -0.23
SCAMP3-206ENST00000478737 LTV1Q96GA3 475 aaPredicted RBP13.64□□□□□ -0.23
SCAMP3-206ENST00000478737 NBPF4Q96M43 638 aa13.64□□□□□ -0.23
SCAMP3-206ENST00000478737 MAP2P11137 1827 aaKnown RBP13.63□□□□□ -0.23
SCAMP3-206ENST00000478737 SF3B2Q13435 895 aaKnown RBP13.62□□□□□ -0.23
SCAMP3-206ENST00000478737 DIEXFQ68CQ4 756 aaKnown RBP13.62□□□□□ -0.23
SCAMP3-206ENST00000478737 MORC1Q86VD1 984 aa13.62□□□□□ -0.23
SCAMP3-206ENST00000478737 NPC1L1Q9UHC9 1359 aa13.61□□□□□ -0.23
SCAMP3-206ENST00000478737 TRIM37O94972 964 aa13.61□□□□□ -0.23
SCAMP3-206ENST00000478737 DEFB132Q7Z7B7 95 aa13.61□□□□□ -0.23
SCAMP3-206ENST00000478737 PARP4Q9UKK3 1724 aaKnown RBP13.61□□□□□ -0.23
SCAMP3-206ENST00000478737 OVOS2A0A0G2JMS6 1433 aa13.59□□□□□ -0.23
SCAMP3-206ENST00000478737 PPM1GO15355 546 aaPredicted RBP13.59□□□□□ -0.23
SCAMP3-206ENST00000478737 TNNT2P45379 298 aaPredicted RBP13.59□□□□□ -0.23
SCAMP3-206ENST00000478737 BAG6P46379 1132 aa13.59□□□□□ -0.23
SCAMP3-206ENST00000478737 SMG6Q86US8 1419 aaKnown RBP13.58□□□□□ -0.24
SCAMP3-206ENST00000478737 CAMKK2Q96RR4 588 aa13.58□□□□□ -0.24
SCAMP3-206ENST00000478737 BCL11BQ9C0K0 894 aaPredicted RBP13.58□□□□□ -0.24
SCAMP3-206ENST00000478737 NCAPD2Q15021 1401 aa13.57□□□□□ -0.24
SCAMP3-206ENST00000478737 TNS2Q63HR2 1409 aa13.57□□□□□ -0.24
SCAMP3-206ENST00000478737 FAM208AQ9UK61 1670 aaKnown RBP13.57□□□□□ -0.24
SCAMP3-206ENST00000478737 PEAK1Q9H792 1746 aa13.57□□□□□ -0.24
SCAMP3-206ENST00000478737 EN1Q05925 392 aaPredicted RBP13.57□□□□□ -0.24
SCAMP3-206ENST00000478737 EYA1Q99502 592 aa13.57□□□□□ -0.24
SCAMP3-206ENST00000478737 WNK3Q9BYP7 1800 aa13.57□□□□□ -0.24
SCAMP3-206ENST00000478737 PLSCR1O15162 318 aa13.56□□□□□ -0.24
SCAMP3-206ENST00000478737 APBA3O96018 575 aa13.56□□□□□ -0.24
SCAMP3-206ENST00000478737 EIF4A2Q14240 407 aaKnown RBP13.56□□□□□ -0.24
SCAMP3-206ENST00000478737 ZCRB1Q8TBF4 217 aaKnown RBP13.56□□□□□ -0.24
SCAMP3-206ENST00000478737 LRRC37A3O60309 1634 aa13.56□□□□□ -0.24
SCAMP3-206ENST00000478737 PTF1AQ7RTS3 328 aa13.55□□□□□ -0.24
SCAMP3-206ENST00000478737 USHBP1Q8N6Y0 703 aa13.55□□□□□ -0.24
SCAMP3-206ENST00000478737 RAPGEF4Q8WZA2 1011 aa13.55□□□□□ -0.24
SCAMP3-206ENST00000478737 PARD3Q8TEW0 1356 aa13.55□□□□□ -0.24
SCAMP3-206ENST00000478737 RGPD2P0DJD1 1756 aa13.55□□□□□ -0.24
SCAMP3-206ENST00000478737 CC2D1BQ5T0F9 858 aaKnown RBP13.54□□□□□ -0.24
SCAMP3-206ENST00000478737 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms